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Split espresso I/O routines from confio.cpp
2015-07-23
Teemu Murtola
Split espresso I/O routines from confio.cpp
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2015-07-22
Teemu Murtola
Split gro I/O routines from confio.cpp
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2015-07-22
Teemu Murtola
Split g96 I/O routines from confio.cpp
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2015-07-22
Teemu Murtola
Move read_tps_conf() to confio.h
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2015-07-22
Teemu Murtola
Add basic tests for reading/writing structure files
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2015-07-10
Teemu Murtola
More gmxfio simplification
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2015-07-04
Teemu Murtola
Fix error wrapping in interactive selection input
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2015-07-04
Teemu Murtola
Tests for interactive selection input
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2015-07-04
Teemu Murtola
Fix copy-paste bug in gmx distance
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2015-07-04
Teemu Murtola
Refactor for testing interactive selection input
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2015-07-04
Teemu Murtola
Remove gmx::File (except for File::exists())
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2015-07-04
Teemu Murtola
Replace direct uses of gmx::File with streams
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2015-07-02
Teemu Murtola
Convert gmxfio to C++
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2015-07-02
Teemu Murtola
Clean up gmxfio includes
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2015-07-02
Teemu Murtola
Reorder code within gmxfio
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2015-07-02
Teemu Murtola
Further gmxfio cleanup related to xdr handling
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2015-06-16
Teemu Murtola
Fix broken links from the old flow chart
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2015-06-12
Teemu Murtola
Improve uncrustify Jenkins builds
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2015-06-09
Teemu Murtola
Add description of relocatable binaries
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2015-06-04
Teemu Murtola
Refactor rst parsing for console output
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2015-06-04
Teemu Murtola
Replace gromacs.7 man page with gmx.1
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2015-06-04
Teemu Murtola
Document current help formatting
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2015-06-04
Teemu Murtola
Basic support for titles within tool help
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2015-05-27
Mark Abraham
Fix warnings from GCC 5
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2015-05-25
Teemu Murtola
Overview docs for analysis nbsearch
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2015-05-22
Teemu Murtola
Allow any order for sections in 'gmx help -export'
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2015-05-22
Teemu Murtola
Merge release-5-0 into master
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2015-05-20
Teemu Murtola
Fix handling of real-valued 'to' selection ranges
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2015-05-11
Teemu Murtola
Use single variable for expected Doxygen version
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2015-05-10
Teemu Murtola
Move some testutils and overview docs to dev guide
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2015-04-24
Mark Abraham
Add developer docs for new documentation infrastructure
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2015-04-24
Teemu Murtola
Add section on naming conventions to dev manual
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2015-02-13
Teemu Murtola
Replace some [BR] in help texts with rst literals
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2015-01-24
Teemu Murtola
Remove old selection parser error handling code
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2015-01-07
Teemu Murtola
Custom program context for unit tests
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2015-01-06
Teemu Murtola
Use xvgrclose() for files opened with xvgropen()
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2015-01-02
Teemu Murtola
Update copyright year in copyrite.cpp
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2014-12-28
Teemu Murtola
Convert gmx-insert-molecules into proper C++ module
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2014-12-18
Teemu Murtola
Rework gmx-solvate to use analysis nbsearch
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2014-12-14
Teemu Murtola
C++ interface for surface area calculation
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2014-11-27
Teemu Murtola
Clean up gmx solvate
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2014-11-27
Teemu Murtola
More control over file backups
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2014-11-26
Teemu Murtola
Convert surface area calculation to C++
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2014-11-21
Teemu Murtola
Describe doc-check in developer manual
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2014-10-30
Teemu Murtola
Add more selection unit tests
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2014-10-30
Teemu Murtola
Fix more memory leaks in default group creation
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2014-10-29
Teemu Murtola
Merge release-5-0 into master
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2014-10-28
Teemu Murtola
Avoid common.h inclusion in CUDA code
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2014-10-23
Teemu Murtola
Move truncate() wrapper to futil.h
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2014-10-23
Teemu Murtola
Encapsulate use of nice()
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2014-10-22
Teemu Murtola
Collect more platform-specific code to sysinfo.h
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2014-10-22
Teemu Murtola
Rename common.h to classhelpers.h
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2014-10-14
Teemu Murtola
Check config.h usage in doc-check
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2014-09-21
Teemu Murtola
Introduce a variable to identify in-source build
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2014-09-21
Teemu Murtola
Skip man/html/completion generation if not needed
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2014-09-13
Teemu Murtola
Extend support for float/double tolerances in testing
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2014-09-12
Teemu Murtola
Run include order check in doc-check
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2014-09-05
Teemu Murtola
Remove unnecessary config.h includes
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2014-09-05
Teemu Murtola
Move some defines to gmxpre.h for thread-MPI
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2014-09-04
Teemu Murtola
Include config.h directly if used
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2014-08-23
Mark Abraham
Generalize markdown configuration machinery
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2014-08-22
Teemu Murtola
Move -nice handling to CommandLineModuleManager
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2014-08-20
Teemu Murtola
Misc. gmxpre.h-related changes
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2014-08-20
Teemu Murtola
Merge release-5-0 into master
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2014-08-20
Teemu Murtola
Remove unused config.h defines
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2014-08-19
Teemu Murtola
Introduce gmxpre.h for truly global definitions
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2014-08-14
Teemu Murtola
Fix CMake package config after recent version changes
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2014-08-10
Teemu Murtola
Improve initAfterFirstFrame() usability
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2014-08-10
Teemu Murtola
Make vec.h const-correct with both C and C++
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2014-08-10
Teemu Murtola
Basic exclusion support for analysis nbsearch
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2014-08-10
Roland Schulz
Merge release-4-6 into release-5-0
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2014-08-09
Teemu Murtola
Add Selection::hasOnlyAtoms()
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2014-08-07
Teemu Murtola
Basic support for 2D neighborhood search for analysis
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2014-08-04
Teemu Murtola
Verify MD5 sum for FFTW download
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2014-08-03
Teemu Murtola
Check frame atom count before evaluating selections
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2014-07-24
Teemu Murtola
Do not actually install uniqueptr.h
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2014-07-10
Teemu Murtola
Bump SOVERSION
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2014-07-09
Teemu Murtola
Clean up gmx_header_config
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2014-07-09
Teemu Murtola
Merge release-5-0 into master
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2014-07-09
Teemu Murtola
Improve module dependency graph layout
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2014-07-08
Teemu Murtola
Move GMX_CXX11 to config.h
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2014-07-08
Teemu Murtola
Remove gmx_unique_ptr from options public headers
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2014-07-08
Teemu Murtola
Remove selection help from SelectionCollection
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2014-07-08
Teemu Murtola
Make doc-check pass again without warnings
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2014-07-05
Teemu Murtola
Merge release-5-0 into master
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2014-06-30
Teemu Murtola
Merge release-5-0 into master
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2014-06-28
Teemu Murtola
Remove overeager selection index group check
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2014-06-21
Teemu Murtola
Convert checkpoint.c to C++ compilation
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2014-06-07
Teemu Murtola
Clean up FileNameOptionStorage implementation
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2014-06-07
Teemu Murtola
Move index.* to topology/
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2014-06-03
Mark Abraham
Convert repl_ex.c to C++
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2014-06-02
Teemu Murtola
Move atomprop.* to topology/
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2014-05-31
Teemu Murtola
Move mtop_util.* and topsort.* to topology/
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2014-05-29
Teemu Murtola
Remove more uses of typedefs.h
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2014-05-25
Teemu Murtola
Move general functions out of typedefs.h
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2014-05-25
Teemu Murtola
Remove some typedefs.h dependencies
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2014-05-25
Teemu Murtola
Move types/topology.h to topology/
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2014-05-24
Teemu Murtola
Move types/idef.h to topology/
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2014-05-21
Teemu Murtola
Move mshift.* to pbcutil/
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2014-05-21
Teemu Murtola
Merge t_graph definition into mshift.h
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