Move mtop_util.* and topsort.* to topology/
authorTeemu Murtola <teemu.murtola@gmail.com>
Sat, 31 May 2014 04:18:31 +0000 (07:18 +0300)
committerTeemu Murtola <teemu.murtola@gmail.com>
Sat, 31 May 2014 04:21:32 +0000 (07:21 +0300)
commit60c02f12abc001b4ce8c2e5ff2486396c921e4b7
treea277edb34ab4559b53de7415de2e05fc7fcac74f
parent6efaa579de8c6f0ab1e2a4da55f7da5fb4c2eff3
Move mtop_util.* and topsort.* to topology/

- Remove unnecessary includes of these headers.
- Some minor cleanup in the moved files.

Change-Id: I7ad70f4c1870307713db35b8b243bed1dc9cbdd2
51 files changed:
src/gromacs/essentialdynamics/edsam.c
src/gromacs/fileio/confio.c
src/gromacs/fileio/tpxio.c
src/gromacs/gmxana/gmx_clustsize.c
src/gromacs/gmxana/gmx_disre.c
src/gromacs/gmxana/gmx_energy.c
src/gromacs/gmxana/gmx_genion.c
src/gromacs/gmxana/gmx_nmeig.c
src/gromacs/gmxana/gmx_pme_error.cpp
src/gromacs/gmxlib/disre.c
src/gromacs/gmxlib/orires.c
src/gromacs/gmxpreprocess/addconf.c
src/gromacs/gmxpreprocess/gen_maxwell_velocities.c
src/gromacs/gmxpreprocess/grompp.c
src/gromacs/gmxpreprocess/readir.c
src/gromacs/imd/imd.c
src/gromacs/mdlib/clincs.c
src/gromacs/mdlib/constr.c
src/gromacs/mdlib/domdec.c
src/gromacs/mdlib/domdec_con.c
src/gromacs/mdlib/domdec_top.c
src/gromacs/mdlib/forcerec.c
src/gromacs/mdlib/genborn.c
src/gromacs/mdlib/genborn_sse2_double.c
src/gromacs/mdlib/genborn_sse2_single.c
src/gromacs/mdlib/md_support.c
src/gromacs/mdlib/mdatom.c
src/gromacs/mdlib/mdebin.c
src/gromacs/mdlib/minimize.c
src/gromacs/mdlib/ns.c
src/gromacs/mdlib/perf_est.c
src/gromacs/mdlib/qmmm.c
src/gromacs/mdlib/shellfc.c
src/gromacs/mdlib/tgroup.c
src/gromacs/mdlib/tpi.c
src/gromacs/mdlib/vsite.c
src/gromacs/pulling/pull.c
src/gromacs/pulling/pull_rotation.c
src/gromacs/swap/swapcoords.c
src/gromacs/tools/check.c
src/gromacs/tools/compare.c
src/gromacs/tools/convert_tpr.c
src/gromacs/tools/dump.c
src/gromacs/topology/CMakeLists.txt
src/gromacs/topology/mtop_util.c [moved from src/gromacs/gmxlib/mtop_util.c with 99% similarity]
src/gromacs/topology/mtop_util.h [moved from src/gromacs/legacyheaders/mtop_util.h with 98% similarity]
src/gromacs/topology/topsort.c [moved from src/gromacs/gmxlib/topsort.c with 98% similarity]
src/gromacs/topology/topsort.h [moved from src/gromacs/gmxlib/topsort.h with 93% similarity]
src/programs/mdrun/md.c
src/programs/mdrun/membed.c
src/programs/mdrun/runner.c