BioD PNPI Git Repos - alexxy/gromacs.git/commit

biod.pnpi.spb.ru / alexxy / gromacs.git / commit

author	Teemu Murtola <teemu.murtola@gmail.com>
	Mon, 2 Jun 2014 18:36:21 +0000 (21:36 +0300)
committer	Teemu Murtola <teemu.murtola@gmail.com>
	Sat, 7 Jun 2014 06:58:30 +0000 (09:58 +0300)
commit	ffc891f7dc35856bf8575cdc6ef62e09f8bd2473
tree	e1c16604db51e5aefc0f6971f667275c8fcf8307	tree \| snapshot
parent	d2ce400eb9d03d330f3b30733eac7c56bf27008a	commit \| diff

Move index.* to topology/

- Move index.h and index.c to topology/.
- Remove some unused and duplicate includes.
- Convert the source file to C++ (scanf issues suppressed for now).

Change-Id: I99374f5d2e53b6c26bf6441b630234177c83affb

96 files changed:

src/contrib/do_multiprot.c		diff \| blob \| history
src/contrib/do_shift.c		diff \| blob \| history
src/contrib/g_anavel.c		diff \| blob \| history
src/contrib/gmx_sdf.c		diff \| blob \| history
src/contrib/hexamer.c		diff \| blob \| history
src/gromacs/fileio/pdbio.c		diff \| blob \| history
src/gromacs/gmxana/dlist.c		diff \| blob \| history
src/gromacs/gmxana/expfit.c		diff \| blob \| history
src/gromacs/gmxana/gmx_anaeig.c		diff \| blob \| history
src/gromacs/gmxana/gmx_angle.c		diff \| blob \| history
src/gromacs/gmxana/gmx_bundle.c		diff \| blob \| history
src/gromacs/gmxana/gmx_chi.c		diff \| blob \| history
src/gromacs/gmxana/gmx_cluster.c		diff \| blob \| history
src/gromacs/gmxana/gmx_clustsize.c		diff \| blob \| history
src/gromacs/gmxana/gmx_confrms.c		diff \| blob \| history
src/gromacs/gmxana/gmx_covar.c		diff \| blob \| history
src/gromacs/gmxana/gmx_current.c		diff \| blob \| history
src/gromacs/gmxana/gmx_density.c		diff \| blob \| history
src/gromacs/gmxana/gmx_densmap.c		diff \| blob \| history
src/gromacs/gmxana/gmx_densorder.cpp		diff \| blob \| history
src/gromacs/gmxana/gmx_dipoles.cpp		diff \| blob \| history
src/gromacs/gmxana/gmx_disre.c		diff \| blob \| history
src/gromacs/gmxana/gmx_do_dssp.c		diff \| blob \| history
src/gromacs/gmxana/gmx_dos.c		diff \| blob \| history
src/gromacs/gmxana/gmx_dyecoupl.c		diff \| blob \| history
src/gromacs/gmxana/gmx_dyndom.c		diff \| blob \| history
src/gromacs/gmxana/gmx_editconf.c		diff \| blob \| history
src/gromacs/gmxana/gmx_filter.c		diff \| blob \| history
src/gromacs/gmxana/gmx_genion.c		diff \| blob \| history
src/gromacs/gmxana/gmx_genpr.c		diff \| blob \| history
src/gromacs/gmxana/gmx_gyrate.c		diff \| blob \| history
src/gromacs/gmxana/gmx_h2order.c		diff \| blob \| history
src/gromacs/gmxana/gmx_hbond.c		diff \| blob \| history
src/gromacs/gmxana/gmx_helix.c		diff \| blob \| history
src/gromacs/gmxana/gmx_helixorient.c		diff \| blob \| history
src/gromacs/gmxana/gmx_hydorder.c		diff \| blob \| history
src/gromacs/gmxana/gmx_make_edi.c		diff \| blob \| history
src/gromacs/gmxana/gmx_make_ndx.c		diff \| blob \| history
src/gromacs/gmxana/gmx_mdmat.c		diff \| blob \| history
src/gromacs/gmxana/gmx_mindist.c		diff \| blob \| history
src/gromacs/gmxana/gmx_morph.c		diff \| blob \| history
src/gromacs/gmxana/gmx_msd.c		diff \| blob \| history
src/gromacs/gmxana/gmx_nmeig.c		diff \| blob \| history
src/gromacs/gmxana/gmx_nmens.c		diff \| blob \| history
src/gromacs/gmxana/gmx_nmtraj.c		diff \| blob \| history
src/gromacs/gmxana/gmx_order.c		diff \| blob \| history
src/gromacs/gmxana/gmx_polystat.c		diff \| blob \| history
src/gromacs/gmxana/gmx_potential.c		diff \| blob \| history
src/gromacs/gmxana/gmx_principal.c		diff \| blob \| history
src/gromacs/gmxana/gmx_rama.c		diff \| blob \| history
src/gromacs/gmxana/gmx_rdf.c		diff \| blob \| history
src/gromacs/gmxana/gmx_rms.c		diff \| blob \| history
src/gromacs/gmxana/gmx_rmsdist.c		diff \| blob \| history
src/gromacs/gmxana/gmx_rmsf.c		diff \| blob \| history
src/gromacs/gmxana/gmx_rotacf.c		diff \| blob \| history
src/gromacs/gmxana/gmx_rotmat.c		diff \| blob \| history
src/gromacs/gmxana/gmx_sans.c		diff \| blob \| history
src/gromacs/gmxana/gmx_sorient.c		diff \| blob \| history
src/gromacs/gmxana/gmx_spatial.c		diff \| blob \| history
src/gromacs/gmxana/gmx_spol.c		diff \| blob \| history
src/gromacs/gmxana/gmx_tcaf.c		diff \| blob \| history
src/gromacs/gmxana/gmx_traj.c		diff \| blob \| history
src/gromacs/gmxana/gmx_trjcat.c		diff \| blob \| history
src/gromacs/gmxana/gmx_trjconv.c		diff \| blob \| history
src/gromacs/gmxana/gmx_trjorder.c		diff \| blob \| history
src/gromacs/gmxana/gmx_vanhove.c		diff \| blob \| history
src/gromacs/gmxana/gmx_velacc.c		diff \| blob \| history
src/gromacs/gmxana/gmx_wheel.c		diff \| blob \| history
src/gromacs/gmxana/gstat.h		diff \| blob \| history
src/gromacs/gmxana/hxprops.c		diff \| blob \| history
src/gromacs/gmxana/nsfactor.h		diff \| blob \| history
src/gromacs/gmxana/sfactor.c		diff \| blob \| history
src/gromacs/gmxana/sfactor.h		diff \| blob \| history
src/gromacs/gmxpreprocess/gen_vsite.c		diff \| blob \| history
src/gromacs/gmxpreprocess/grompp.c		diff \| blob \| history
src/gromacs/gmxpreprocess/pdb2gmx.c		diff \| blob \| history
src/gromacs/gmxpreprocess/pdb2top.cpp		diff \| blob \| history
src/gromacs/gmxpreprocess/protonate.c		diff \| blob \| history
src/gromacs/gmxpreprocess/readir.c		diff \| blob \| history
src/gromacs/gmxpreprocess/readpull.c		diff \| blob \| history
src/gromacs/gmxpreprocess/vsite_parm.c		diff \| blob \| history
src/gromacs/gmxpreprocess/xlate.c		diff \| blob \| history
src/gromacs/gmxpreprocess/xlate.h		diff \| blob \| history
src/gromacs/pulling/pull.c		diff \| blob \| history
src/gromacs/pulling/pullutil.c		diff \| blob \| history
src/gromacs/selection/indexutil.cpp		diff \| blob \| history
src/gromacs/tools/check.c		diff \| blob \| history
src/gromacs/tools/convert_tpr.c		diff \| blob \| history
src/gromacs/topology/CMakeLists.txt		diff \| blob \| history
src/gromacs/topology/atomprop.cpp		diff \| blob \| history
src/gromacs/topology/index.cpp	[moved from src/gromacs/gmxlib/index.c with 97% similarity]	diff \| blob \| history
src/gromacs/topology/index.h	[moved from src/gromacs/legacyheaders/index.h with 96% similarity]	diff \| blob \| history
src/programs/mdrun/md.cpp		diff \| blob \| history
src/programs/mdrun/membed.c		diff \| blob \| history
src/programs/view/filter.cpp		diff \| blob \| history
tests/CppCheck.cmake		diff \| blob \| history

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