Extend support for float/double tolerances in testing
[alexxy/gromacs.git] / src /
2014-09-13 Teemu MurtolaExtend support for float/double tolerances in testing
2014-09-13 Teemu MurtolaDeclare __STDC_*_MACROS in gmxpre.h
2014-09-12 Mark AbrahamMinor changes to mdrun -h descriptions
2014-09-11 Roland SchulzFix sorting and doxygen
2014-09-11 Teemu MurtolaImprove uncrustify.sh return code handling
2014-09-11 Teemu MurtolaAdd gmx_getpid()
2014-09-11 Mark AbrahamConvert domdec code to C++
2014-09-11 Teemu MurtolaMove _GNU_SOURCE to gmxpre.h
2014-09-11 Teemu MurtolaSort includes outside src/gromacs
2014-09-11 Teemu MurtolaSort all includes in src/gromacs
2014-09-11 Teemu MurtolaUse absolute include paths in nbnxn kernels
2014-09-11 Teemu MurtolaManually sort some includes in src/gromacs
2014-09-10 Erik LindahlImprove performance of MIC exponential
2014-09-10 David van der SpoelRemove .tpa, .tpb, .tpx, .trj files. Part of #1500.
2014-09-10 Justin LemkulAdded flat-bottom cylindrical restraints in x and y.
2014-09-10 Roland SchulzMerge release-5-0 into master
2014-09-09 Berk HessFixed DD state collection issue
2014-09-09 Rossen ApostolovConverted groupcoord to C++.
2014-09-09 Rossen ApostolovConverted fft files to C++.
2014-09-08 Erik LindahlAdd 64-bit AArch64 asimd SIMD support
2014-09-08 Erik LindahlAdd 32-bit ARM Neon SIMD support
2014-09-08 Berk HessCheck for implicit solvent + Verlet scheme
2014-09-08 Teemu MurtolaSupport custom default extension for FileNameOption
2014-09-08 Teemu MurtolaRemove unnecessary extensions in t_filenm defaults
2014-09-07 Teemu MurtolaMore consistent default handling for StringOption
2014-09-07 Roland SchulzRemove some include order dependencies
2014-09-07 Roland SchulzFix build for external boost 1.56.0
2014-09-07 Roland SchulzSimplify AVX integer load/store
2014-09-05 Roland SchulzFix build for external boost 1.56.0
2014-09-05 Teemu MurtolaRemove unnecessary config.h includes
2014-09-05 Teemu MurtolaMove some defines to gmxpre.h for thread-MPI
2014-09-05 Teemu MurtolaAnother batch of added config.h
2014-09-05 Teemu MurtolaMerge "Merge release-5-0 into master"
2014-09-05 Roland SchulzMerge release-5-0 into master
2014-09-04 Roland SchulzSlight simplifcation of 2xnn
2014-09-04 Teemu MurtolaInclude config.h directly if used
2014-09-04 Teemu MurtolaMake doc-check silent for in-source build
2014-09-04 Teemu MurtolaMerge "Merge release-5-0 into master"
2014-09-04 Mark AbrahamCreated bonded module
2014-09-04 Erik LindahlK-computer specific modifications
2014-09-04 Christoph Junghanscmake: missing quote
2014-09-03 Roland SchulzMerge release-5-0 into master
2014-09-03 Roland SchulzFix MingW build
2014-09-03 Erik LindahlFixed sc_power==48 crash in single precision
2014-09-03 Mark AbrahamFix mis-use of fabs in LAPACK
2014-09-03 Roland SchulzFix that TNG tests were not run
2014-09-03 Erik LindahlFixed preprocessor error for AVX_128_FMA simd
2014-09-02 Erik LindahlFix formatting of fatal errors in g_bar
2014-09-02 Roland SchulzFix PRINT_ALLOC_KB output
2014-09-02 Magnus LundborgTNG Fix for GMX_DOUBLE builds and where ZLIB is not...
2014-09-02 Magnus LundborgFix data block length when uncompressing TNG data.
2014-09-01 Magnus LundborgTNG: Handle large files on 32 bit systems.
2014-09-01 Justin LemkulUpdated x-axis label for g_wham.
2014-09-01 Magnus LundborgWhen writing TNG include file closing in wallcycle.
2014-09-01 Mark AbrahamMerge "Merge branch release-4-6 into release-5-0" into...
2014-09-01 Mark AbrahamFixes and updates to BlueGene/Q support
2014-09-01 Mark AbrahamMerge branch release-4-6 into release-5-0
2014-09-01 Mark AbrahamMerge "Merge branch release-4-6 into release-5-0" into...
2014-08-31 Erik LindahlAdded negative zero preprocessor constants
2014-08-30 David van der SpoelFixes issue with vsiten and verlet buffers.
2014-08-29 Mark AbrahamMerge branch release-4-6 into release-5-0
2014-08-28 Berk HessFixed two PME issues with MPI+OpenMP
2014-08-25 Berk HessFixed bugs in vsiteN with OpenMP
2014-08-25 Roland SchulzMerge release-5-0 into master
2014-08-24 Berk HessInitialize unused velocity constraint components
2014-08-24 Teemu MurtolaPrecalculate pbc shift for analysis nbsearch
2014-08-24 Teemu MurtolaImprove analysis nbsearch grid mapping
2014-08-22 Mark AbrahamFix zlib usage with TNG
2014-08-22 Teemu MurtolaMove -nice handling to CommandLineModuleManager
2014-08-21 Magnus LundborgFixed TNG memory alignment problem and reset pointers.
2014-08-21 Mark AbrahamFix mis-use of fabs in LAPACK
2014-08-20 Teemu MurtolaMisc. gmxpre.h-related changes
2014-08-20 Teemu MurtolaMerge release-5-0 into master
2014-08-20 Erik LindahlAdd _GNU_SOURCE=1 to find clone() with PGI
2014-08-20 Roland SchulzChange error to warning for missing OMP_NUM_THREADS
2014-08-20 Erik LindahlFix matrix pointer dereference bug in update.c
2014-08-20 Erik LindahlEnable SIMD register calling convention with gmx_simdcall
2014-08-20 Erik LindahlAdd cycle counters for 64-bit ARM
2014-08-20 Teemu MurtolaRemove unused config.h defines
2014-08-19 Teemu MurtolaIntroduce gmxpre.h for truly global definitions
2014-08-18 Roland SchulzFix nbnxn templates
2014-08-17 Roland SchulzRemove check that auto-generated files exist
2014-08-17 Erik LindahlFix Portland compiler warnings
2014-08-17 Berk HessHalved the cost of the pull communication
2014-08-17 Roland SchulzDon't build tests until they are run
2014-08-17 Roland SchulzUse full path for legacyheaders
2014-08-17 Mark AbrahamRemove mdrun -seppot
2014-08-16 Mark AbrahamFix gmx tune_pme with LJ-PME
2014-08-16 Mark AbrahamFix wallcycle counting with md-vv, sd and sd2
2014-08-16 Teemu MurtolaDisable analysisdata generic tests if not compilable
2014-08-16 Roland SchulzMerge release-5-0 into master
2014-08-15 Carsten KutznerFixed output of eigenvalues in g_covar. Fixes #1575
2014-08-14 Berk HessCorrected SIMD math overflow documentation
2014-08-14 Teemu MurtolaFix CMake package config after recent version changes
2014-08-13 Teemu MurtolaUse native CMake mechanism for find_package(GROMACS)
2014-08-13 Teemu MurtolaReorganize CMake version information management
2014-08-11 Roland SchulzMove some verlet headers to mdlib
2014-08-11 Stefan FleischmannAvoid stack overflow on Windows with CMake > 2.8.10.2
2014-08-10 Erik LindahlImprove Gromacs portability
2014-08-10 Erik LindahlReplace __LP64__ with check for pointer size
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