Remove unused thole polarization rfac parameter
[alexxy/gromacs.git] / src / gromacs / fileio /
2021-11-03 Joe JordanRemove unused thole polarization rfac parameter
2021-11-01 Eliane BriandAdd DSSP v4 support to do_dssp
2021-10-29 Magnus LundborgAllow TNG to TNG file conversion without time per frame...
2021-10-29 Berk HessReimplement constant acceleration groups
2021-10-18 Andrey AlekseenkoMerge release-2021 into master
2021-10-05 Sebastian KehlRename sc-sigma-LJ-gapsys to sc-gapsys-sigma-LJ.
2021-10-05 Sebastian KehlRename sc-scale-X-gapsys to sc-gapsys-scale-X.
2021-10-05 Sebastian KehlIntroduce explicit parameters for gapsys-sc.
2021-10-05 Sebastian KehlAdd gapsys softcore function.
2021-09-22 Pascal MerzIntroduce expanded ensemble in modular simulator
2021-09-17 Andrey AlekseenkoFix Clang warnings for built-in XDR libraries
2021-09-14 Andrey AlekseenkoMerge remote-tracking branch 'origin/release-2021'...
2021-09-07 Mark AbrahamReplace ResidueTypeMap with std::unordered_map
2021-09-03 Paul BauerAdd support for transformation pull coordinates
2021-09-01 Mark AbrahamUse better data structure to implement ResidueType
2021-08-20 Mark AbrahamAdd tests for gmx chi
2021-08-19 Andrey AlekseenkoMerge remote-tracking branch 'origin/release-2021'...
2021-08-11 Andrey AlekseenkoFix few issues with open-source Intel LLVM (Clang 13)
2021-08-03 Mark AbrahamUpdate bundled GoogleTest to current HEAD
2021-06-29 Paul BauerMerge branch release-2021 into master
2021-06-17 Mark AbrahamRework -Weverything
2021-06-07 Paul BauerUse enum class for checkpoint version
2021-06-03 Dmitry MorozovAdded QM input file name as command-line parameter...
2021-05-15 Paul BauerUse InheritParentConfig: true in clang-tidy files
2021-05-11 Mark AbrahamApply clang-format-11
2021-05-07 Paul BauerMerge branch release-2021 into merge-2021-into-master
2021-04-26 Paul BauerFix MSVC build
2021-04-23 Artem ZhmurovApply clang-11 fixes for fileio
2021-04-23 Andrey AlekseenkoFix beningn GCC 10.2 Wstringop-truncation warnings
2021-04-22 Joe JordanVectors in history_t
2021-04-19 Artem ZhmurovMake Compartment, Channel, ChannelHistory and Domaint...
2021-04-19 Artem ZhmurovMake XDR type into enum class
2021-04-17 Mark AbrahamRename files to follow style
2021-04-12 Mark AbrahamImprove docs and naming for MdModulesNotifiers
2021-04-02 Paul BauerReplace gmx_mtop_ilistloop_all
2021-03-31 Mark AbrahamMake EnumerationArray::size() not static
2021-03-30 Berk HessAdd coordIndex to t_pull_coord
2021-03-23 Paul BauerPrevent creating string from nullptr in plugin loading
2021-03-22 Mark AbrahamUse StringToEnumValueConverter and enumValueToString...
2021-03-22 Kevin BoydClean up leaks in t_inputrec
2021-03-19 Paul BauerBulk change to const ref for mtop
2021-03-15 Paul BauerMove M_PI definition to math/units.h
2021-03-10 Paul BauerMake AWH parameters proper C++
2021-03-09 ejjordanMove radian-angle conversions to math/utility
2021-03-09 Joe JordanUse constexpr for physical constants and move them...
2021-03-05 Mark AbrahamFix clang-format and naming of static variable
2021-03-05 Mark AbrahamIntroduce StringToEnumValue
2021-03-05 Paul BauerMerge branch release-2020 into merge-2020-into-2021
2021-03-04 Paul BauerModernize AWH enumerations
2021-03-02 Paul BauerModernize atom enums
2021-03-01 Mark AbrahamVarious fixes for gmx xpm2ps
2021-02-24 Paul BauerRework state checkpoint enum handling
2021-02-22 Paul BauerRefactor md_enums
2021-02-12 Mark AbrahamMerge branch release-2021 into master
2021-02-09 Pascal MerzMake temperature and pressure coupling enums enum classes
2021-02-01 Mark AbrahamReplace gmx::Mutex with std::mutex
2021-01-29 Mark AbrahamRemove PrivateImplPointer in favour of std::unique_ptr
2021-01-29 Mark AbrahamMerge branch release-2021
2021-01-27 Pascal MerzRemove constant acceleration groups
2021-01-20 Mark AbrahamDescribe the configured precision correctly for mdrun
2021-01-20 Paul BauerFix TPR handling for older versions.
2021-01-07 Paul BauerMerge branch release-2020 into merge-2020-into-2021
2020-12-18 Mark AbrahamMerge branch release-2021
2020-12-16 M. Eric IrrgangApply re-formatting to C++ in src/ tree.
2020-12-11 Pascal MerzFix trx frame reading from modular simulator checkpoint...
2020-12-09 Pascal MerzFix and activate tests for kv-tree checkpoint functions
2020-12-09 Pascal MerzFix dump of checkpoint files
2020-12-05 Pascal MerzClarify checkpoint mismatch error, and enable in release
2020-11-24 Paul BauerMerge branch 'origin/release-2021' into merge-2021...
2020-11-24 Paul BauerMerge branch 'origin/release-2020' into merge-2020...
2020-11-22 Christoph Junghanscmake: add trxio.h to legacy api interface
2020-11-20 M. Eric IrrgangCreate CMake targets for each of the modules.
2020-11-05 Paul BauerMerge branch 'origin/release-2021' into merge-2021...
2020-11-04 M. Eric IrrgangEstablish `api/` as the home for installed headers.
2020-10-28 Gilles Gouaillardetoptions: add the eftCSV OptionFileType
2020-10-20 Paul BauerMerge branch 'origin/release-2020' into merge-release...
2020-10-19 Andrey AlekseenkoFix random doxygen warnings and typos
2020-10-13 Joe JordanFix segfault in pull reading
2020-10-09 Paul BauerRemove under the hood editing of pdb files
2020-10-07 Paul BauerMerge branch 'origin/release-2020' into merge-release...
2020-10-05 Paul BauerFix doxygen warnings
2020-10-02 Joe JordanAdd tests for setStringEntry
2020-10-01 Berk HessMove computeSlowForces into stepWork
2020-09-30 Berk HessMove computeSlowForces into stepWork
2020-09-29 Artem ZhmurovDon't use fah_fsync
2020-09-16 Pascal MerzImplement modular checkpointing
2020-09-10 Berk HessFix memory corruption with strings in grompp
2020-09-06 Pascal MerzPrepare legacy checkpoint for modular simulator checkpo...
2020-08-31 Paul BauerMerge branch 'release-2020' into master
2020-08-13 Christian BlauRemove superfluous math utility functions
2020-08-10 Christian BlauMove density fitting checkpointing into state
2020-07-31 Mark AbrahamMove code to prepare for multisim class
2020-07-29 Kevin BoydFix undefined behavior flagged by UBSAN
2020-07-15 Alexey ShvetsovAllow to compile template with gmx-lagacyapi enabled
2020-07-09 Pascal MerzDivide default communicator from DD communicators
2020-07-07 Christian BlauMove finalising routine into mtop
2020-07-06 Roland SchulzModernize STL usage
2020-06-23 Berk HessAdd virtual site with one constructing atom
2020-06-22 Berk HessFix tpxio function type update table
2020-06-15 Erik LindahlReplace trivalue options with plain booleans
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