BioD PNPI Git Repos - alexxy/gromacs.git/shortlog

biod.pnpi.spb.ru / alexxy / gromacs.git / shortlog

2014-09-05	Teemu Murtola	Merge "Merge release-5-0 into master"	commit \| commitdiff \| tree \| snapshot
2014-09-05	Mark Abraham	Version bumps after new release	commit \| commitdiff \| tree \| snapshot
2014-09-05	Mark Abraham	Version 5.0.1	commit \| commitdiff \| tree \| snapshot
2014-09-05	Roland Schulz	Merge release-5-0 into master	commit \| commitdiff \| tree \| snapshot
2014-09-04	Roland Schulz	Add Mingw warnings	commit \| commitdiff \| tree \| snapshot
2014-09-04	Roland Schulz	Slight simplifcation of 2xnn	commit \| commitdiff \| tree \| snapshot
2014-09-04	Teemu Murtola	Include config.h directly if used	commit \| commitdiff \| tree \| snapshot
2014-09-04	Teemu Murtola	Make doc-check silent for in-source build	commit \| commitdiff \| tree \| snapshot
2014-09-04	Teemu Murtola	Merge "Merge release-5-0 into master"	commit \| commitdiff \| tree \| snapshot
2014-09-04	Mark Abraham	Created bonded module	commit \| commitdiff \| tree \| snapshot
2014-09-04	Erik Lindahl	K-computer specific modifications	commit \| commitdiff \| tree \| snapshot
2014-09-04	Christoph Junghans	cmake: missing quote	commit \| commitdiff \| tree \| snapshot
2014-09-03	Roland Schulz	Merge release-5-0 into master	commit \| commitdiff \| tree \| snapshot
2014-09-03	Roland Schulz	Fix MingW build	commit \| commitdiff \| tree \| snapshot
2014-09-03	Erik Lindahl	Fixed sc_power==48 crash in single precision	commit \| commitdiff \| tree \| snapshot
2014-09-03	Mark Abraham	Fix mis-use of fabs in LAPACK	commit \| commitdiff \| tree \| snapshot
2014-09-03	Mark Abraham	More hacking to get the template to detect and build	commit \| commitdiff \| tree \| snapshot
2014-09-03	Roland Schulz	Fix that TNG tests were not run	commit \| commitdiff \| tree \| snapshot
2014-09-03	Erik Lindahl	Fixed preprocessor error for AVX_128_FMA simd	commit \| commitdiff \| tree \| snapshot
2014-09-02	Erik Lindahl	Fix formatting of fatal errors in g_bar	commit \| commitdiff \| tree \| snapshot
2014-09-02	Roland Schulz	Fix PRINT_ALLOC_KB output	commit \| commitdiff \| tree \| snapshot
2014-09-02	Magnus Lundborg	TNG Fix for GMX_DOUBLE builds and where ZLIB is not...	commit \| commitdiff \| tree \| snapshot
2014-09-02	Magnus Lundborg	Fix data block length when uncompressing TNG data.	commit \| commitdiff \| tree \| snapshot
2014-09-02	Erik Lindahl	Fixed string var expansion in CMake due to CMP0053	commit \| commitdiff \| tree \| snapshot
2014-09-01	Magnus Lundborg	TNG: Handle large files on 32 bit systems.	commit \| commitdiff \| tree \| snapshot
2014-09-01	Justin Lemkul	Updated x-axis label for g_wham.	commit \| commitdiff \| tree \| snapshot
2014-09-01	Magnus Lundborg	When writing TNG include file closing in wallcycle.	commit \| commitdiff \| tree \| snapshot
2014-09-01	Mark Abraham	Fix and document issues with template.cpp	commit \| commitdiff \| tree \| snapshot
2014-09-01	Mark Abraham	Merge "Merge branch release-4-6 into release-5-0" into...	commit \| commitdiff \| tree \| snapshot
2014-09-01	Mark Abraham	Fixes and updates to BlueGene/Q support	commit \| commitdiff \| tree \| snapshot
2014-09-01	Mark Abraham	Merge branch release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2014-09-01	Mark Abraham	Merge "Merge branch release-4-6 into release-5-0" into...	commit \| commitdiff \| tree \| snapshot
2014-08-31	Erik Lindahl	Added negative zero preprocessor constants	commit \| commitdiff \| tree \| snapshot
2014-08-30	David van der...	Fixes issue with vsiten and verlet buffers.	commit \| commitdiff \| tree \| snapshot
2014-08-29	Mark Abraham	Version bump after 4.6.7	commit \| commitdiff \| tree \| snapshot
2014-08-29	Mark Abraham	Merge branch release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2014-08-28	Berk Hess	Fixed two PME issues with MPI+OpenMP	commit \| commitdiff \| tree \| snapshot
2014-08-25	Berk Hess	Fixed bugs in vsiteN with OpenMP	commit \| commitdiff \| tree \| snapshot
2014-08-25	Roland Schulz	Merge release-5-0 into master	commit \| commitdiff \| tree \| snapshot
2014-08-24	Berk Hess	Initialize unused velocity constraint components	commit \| commitdiff \| tree \| snapshot
2014-08-24	Teemu Murtola	Precalculate pbc shift for analysis nbsearch	commit \| commitdiff \| tree \| snapshot
2014-08-24	Teemu Murtola	Improve analysis nbsearch grid mapping	commit \| commitdiff \| tree \| snapshot
2014-08-23	Teemu Murtola	Backport of 'Remove unused figures from share/html/'	commit \| commitdiff \| tree \| snapshot
2014-08-23	Mark Abraham	Generalize markdown configuration machinery	commit \| commitdiff \| tree \| snapshot
2014-08-23	Mark Abraham	Unify documentation for webpage build	commit \| commitdiff \| tree \| snapshot
2014-08-22	Mark Abraham	Fix zlib usage with TNG	commit \| commitdiff \| tree \| snapshot
2014-08-22	Teemu Murtola	Move -nice handling to CommandLineModuleManager	commit \| commitdiff \| tree \| snapshot
2014-08-21	Magnus Lundborg	Fixed TNG memory alignment problem and reset pointers.	commit \| commitdiff \| tree \| snapshot
2014-08-21	Mark Abraham	Fix mis-use of fabs in LAPACK	commit \| commitdiff \| tree \| snapshot
2014-08-20	Teemu Murtola	Misc. gmxpre.h-related changes	commit \| commitdiff \| tree \| snapshot
2014-08-20	Teemu Murtola	Merge release-5-0 into master	commit \| commitdiff \| tree \| snapshot
2014-08-20	Erik Lindahl	Add _GNU_SOURCE=1 to find clone() with PGI	commit \| commitdiff \| tree \| snapshot
2014-08-20	Roland Schulz	Change error to warning for missing OMP_NUM_THREADS	commit \| commitdiff \| tree \| snapshot
2014-08-20	Erik Lindahl	Fix matrix pointer dereference bug in update.c	commit \| commitdiff \| tree \| snapshot
2014-08-20	Erik Lindahl	Enable SIMD register calling convention with gmx_simdcall	commit \| commitdiff \| tree \| snapshot
2014-08-20	Erik Lindahl	Add cycle counters for 64-bit ARM	commit \| commitdiff \| tree \| snapshot
2014-08-20	Erik Lindahl	Shorten plugin configuration message	commit \| commitdiff \| tree \| snapshot
2014-08-20	Teemu Murtola	Remove unused config.h defines	commit \| commitdiff \| tree \| snapshot
2014-08-19	Teemu Murtola	Introduce gmxpre.h for truly global definitions	commit \| commitdiff \| tree \| snapshot
2014-08-18	Roland Schulz	Fix nbnxn templates	commit \| commitdiff \| tree \| snapshot
2014-08-18	Roland Schulz	Add Intel command line warning	commit \| commitdiff \| tree \| snapshot
2014-08-17	Roland Schulz	Remove check that auto-generated files exist	commit \| commitdiff \| tree \| snapshot
2014-08-17	Erik Lindahl	Fix Portland compiler warnings	commit \| commitdiff \| tree \| snapshot
2014-08-17	Berk Hess	Halved the cost of the pull communication	commit \| commitdiff \| tree \| snapshot
2014-08-17	Roland Schulz	Don't build tests until they are run	commit \| commitdiff \| tree \| snapshot
2014-08-17	Roland Schulz	Use full path for legacyheaders	commit \| commitdiff \| tree \| snapshot
2014-08-17	Mark Abraham	Remove mdrun -seppot	commit \| commitdiff \| tree \| snapshot
2014-08-16	Mark Abraham	Fix gmx tune_pme with LJ-PME	commit \| commitdiff \| tree \| snapshot
2014-08-16	Mark Abraham	Fix wallcycle counting with md-vv, sd and sd2	commit \| commitdiff \| tree \| snapshot
2014-08-16	Teemu Murtola	Disable analysisdata generic tests if not compilable	commit \| commitdiff \| tree \| snapshot
2014-08-16	Roland Schulz	Merge release-5-0 into master	commit \| commitdiff \| tree \| snapshot
2014-08-15	Carsten Kutzner	Fixed output of eigenvalues in g_covar. Fixes #1575	commit \| commitdiff \| tree \| snapshot
2014-08-14	Berk Hess	Corrected SIMD math overflow documentation	commit \| commitdiff \| tree \| snapshot
2014-08-14	Teemu Murtola	Fix CMake package config after recent version changes	commit \| commitdiff \| tree \| snapshot
2014-08-13	Teemu Murtola	Use native CMake mechanism for find_package(GROMACS)	commit \| commitdiff \| tree \| snapshot
2014-08-13	Teemu Murtola	Reorganize CMake version information management	commit \| commitdiff \| tree \| snapshot
2014-08-11	Roland Schulz	Move some verlet headers to mdlib	commit \| commitdiff \| tree \| snapshot
2014-08-11	Mark Abraham	Add depressing quote	commit \| commitdiff \| tree \| snapshot
2014-08-11	Stefan Fleischmann	Avoid stack overflow on Windows with CMake > 2.8.10.2	commit \| commitdiff \| tree \| snapshot
2014-08-10	Erik Lindahl	Make internal BLAS/LAPACK messages less noisy	commit \| commitdiff \| tree \| snapshot
2014-08-10	Erik Lindahl	Improve Gromacs portability	commit \| commitdiff \| tree \| snapshot
2014-08-10	Erik Lindahl	Replace __LP64__ with check for pointer size	commit \| commitdiff \| tree \| snapshot
2014-08-10	Berk Hess	Added checks for TPI + Verlet scheme	commit \| commitdiff \| tree \| snapshot
2014-08-10	Roland Schulz	Check MD5sum for regressiontest	commit \| commitdiff \| tree \| snapshot
2014-08-10	Teemu Murtola	Improve initAfterFirstFrame() usability	commit \| commitdiff \| tree \| snapshot
2014-08-10	Teemu Murtola	Make vec.h const-correct with both C and C++	commit \| commitdiff \| tree \| snapshot
2014-08-10	Teemu Murtola	Basic exclusion support for analysis nbsearch	commit \| commitdiff \| tree \| snapshot
2014-08-10	Roland Schulz	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2014-08-09	Teemu Murtola	Add Selection::hasOnlyAtoms()	commit \| commitdiff \| tree \| snapshot
2014-08-07	Erik Lindahl	Fix portability issue with ArrayRef initializer overloading	commit \| commitdiff \| tree \| snapshot
2014-08-07	Erik Lindahl	Changed names of test files to avoid Fujitsu compiler bug	commit \| commitdiff \| tree \| snapshot
2014-08-07	Teemu Murtola	Basic support for 2D neighborhood search for analysis	commit \| commitdiff \| tree \| snapshot
2014-08-05	Berk Hess	Fix hang with LJ-PME and empty domains	commit \| commitdiff \| tree \| snapshot
2014-08-05	Roland Schulz	Workaround for ICC 14	commit \| commitdiff \| tree \| snapshot
2014-08-04	Teemu Murtola	Verify MD5 sum for FFTW download	commit \| commitdiff \| tree \| snapshot
2014-08-03	Teemu Murtola	Check frame atom count before evaluating selections	commit \| commitdiff \| tree \| snapshot
2014-08-02	Berk Hess	Fixed PME bug with high OpenMP thread count	commit \| commitdiff \| tree \| snapshot
2014-08-01	Erik Lindahl	Added tests for denormal and underflow for simd exp()	commit \| commitdiff \| tree \| snapshot
2014-07-31	Teemu Murtola	Merge "Merge release-5-0 into master"	commit \| commitdiff \| tree \| snapshot
2014-07-31	Roland Schulz	Replace most strdup with gmx_strdup	commit \| commitdiff \| tree \| snapshot
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