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Embed module dependency graph in Doxygen docs
2014-05-21
Teemu Murtola
Move mshift.* to pbcutil/
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2014-05-21
Teemu Murtola
Merge t_graph definition into mshift.h
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2014-05-20
Teemu Murtola
Move rmpbc.* to pbcutil/
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2014-05-18
Teemu Murtola
Clean up matio.*
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2014-05-18
Teemu Murtola
Move 3dview.* to programs/view/
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2014-05-18
Teemu Murtola
Clean up math/
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2014-05-17
Teemu Murtola
More elaborate default handling for FileNameOption
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2014-05-17
Teemu Murtola
Unit tests for parse_common_args() file options
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2014-05-14
Teemu Murtola
Move physics.* to math/units.*
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2014-05-01
Teemu Murtola
Fix incorrect limits in FloatOptionStorage
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2014-04-28
Teemu Murtola
Move mtxio.* to fileio/
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2014-04-27
Teemu Murtola
Move rvec and friends to math/vectypes.h
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2014-04-27
Teemu Murtola
Move 'real' definition to utility/real.h
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2014-04-17
Teemu Murtola
Move vec.h to math/
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2014-04-16
Teemu Murtola
Remove unused minvert.h
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2014-04-16
Teemu Murtola
Fix typo in fatalerror.h
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2014-04-16
Teemu Murtola
Move xvgr.* to fileio/
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2014-04-16
Teemu Murtola
Clean up xvgr.h and viewit.h usage
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2014-04-16
Teemu Murtola
Remove sysstuff.h
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2014-04-16
Teemu Murtola
Remove sysstuff.h includes from headers
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2014-04-16
Teemu Murtola
Refactor gmx_fatal()
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2014-04-13
Teemu Murtola
Remove unused shift.h
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2014-04-13
Teemu Murtola
Remove utility -> fileio dependencies
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2014-04-13
Teemu Murtola
Clean up futil.*
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2014-04-10
Teemu Murtola
Clean up and fix issues in doc-check scripts
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2014-04-10
Teemu Murtola
Move part of types/simple.h to utility/
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2014-04-10
Teemu Murtola
Remove utility/ dependencies on network.h and main.h
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2014-04-08
Teemu Murtola
Remove some utility -> legacyheaders dependencies
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2014-04-08
Teemu Murtola
Version bump for post-5.0 development
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2014-04-08
Teemu Murtola
Move gmx_fatal.* to utility/fatalerror.*
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2014-04-07
Teemu Murtola
Doxygen documentation for version.h
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2014-04-04
Teemu Murtola
Remove ancient SGI-specific code
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2014-04-04
Teemu Murtola
Clean up gmx_fatal.*
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2014-04-02
Teemu Murtola
Move string2.* to utility/cstringutil.*
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2014-04-01
Teemu Murtola
Move smalloc.h to utility/
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2014-03-31
Teemu Murtola
Remove #include <...> for local files in gmx-view
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2014-03-31
Teemu Murtola
Clean up smalloc.h
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2014-03-31
Teemu Murtola
Move some math headers away from legacyheaders/
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2014-03-31
Teemu Murtola
Remove dependency on commandline/ from oenv.cpp
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2014-03-30
Teemu Murtola
Clean up string2.h-related includes
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2014-03-29
Teemu Murtola
Optimize intermodule dependencies
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2014-03-29
Teemu Murtola
Improve version information handling
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2014-03-29
Teemu Murtola
Better include dependency graph generator
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2014-03-27
Teemu Murtola
Move include dependency checks to doc-check
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2014-03-27
Teemu Murtola
Better automated Doxygen documentation checker
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2014-03-27
Teemu Murtola
Misc. Doxygen fixes
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2014-03-27
Teemu Murtola
Move thread_mpi to src/external/
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2014-03-24
Teemu Murtola
Remove gmxpreprocess from include path
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2014-03-18
Teemu Murtola
Remove interactive help from core selection parser
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2014-03-18
Teemu Murtola
Improve interactive selection input
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2014-03-17
Teemu Murtola
Update manual analysis section
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2014-03-11
Teemu Murtola
Fix misc. Doxygen issues
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2014-03-08
Teemu Murtola
Remove some unnecessary declarations
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2014-03-02
Teemu Murtola
Fix incorrect grid cell size in g_sas -nopbc
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2014-03-01
Teemu Murtola
Move default library path search to program context
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2014-02-28
Teemu Murtola
Residual SIMD Doxygen improvements
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2014-02-28
Teemu Murtola
Misc. Doxygen configuration changes
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2014-02-28
Teemu Murtola
Convert gmx-sas to the C++ framework
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2014-02-28
Teemu Murtola
Add support for non-uniform X axis in array data
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2014-02-27
Teemu Murtola
Improve support for data sets in C++ tools
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2014-02-27
Teemu Murtola
Improve floating point comparisons in unit tests
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2014-02-26
Teemu Murtola
Misc. Doxygen build system improvements
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2014-02-26
Teemu Murtola
Fix GMX_PRIu32 and GMX_PRIu64 for MSVC
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2014-02-20
Teemu Murtola
Add documentation for using Doxygen
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2014-02-16
Teemu Murtola
Improve man page formatting slightly
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2014-02-16
Teemu Murtola
Fix default enum values in help output
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2014-02-15
Teemu Murtola
Fix some broken links in HTML pages
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2014-02-09
Teemu Murtola
Shell completions through Options
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2014-02-09
Teemu Murtola
Make 'gmx -h' invariant wrt. provided options
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2014-02-09
Teemu Murtola
Remove old help formatting code
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2014-02-09
Teemu Murtola
Make FileNameOption behave more like old filenm parser
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2014-02-09
Teemu Murtola
Implement synopsis for help output
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2014-02-09
Teemu Murtola
Refactor new help formatting implementation
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2014-02-08
Teemu Murtola
Fix & update docs for GMX_TEST_OPTIONS
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2014-02-06
Teemu Murtola
Fix build of share/template when installed
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2014-02-03
Teemu Murtola
Merge "Merge release-4-6 into master"
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2014-02-03
Teemu Murtola
Optimize Doxygen build
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2014-02-02
Teemu Murtola
Fix segfault in 'gmx -h'
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2014-02-02
Teemu Murtola
Get rid of src/programs/gmx/
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2014-02-02
Teemu Murtola
Simplify Options::setDescription() usage
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2014-02-02
Teemu Murtola
Extend valgrind suppressions for OpenMPI
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2014-02-01
Teemu Murtola
Fix some issues reported by 'make depcheck doccheck'
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2014-01-31
Teemu Murtola
Overview docs for unit testing
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2014-01-30
Teemu Murtola
Fix shell completions of ffMULT options
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2014-01-30
Teemu Murtola
Overview docs for wrapper binary implementation
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2014-01-30
Teemu Murtola
Overview docs for using Gromacs as a library
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2014-01-30
Teemu Murtola
Rename ProgramInfo to CommandLineProgramContext
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2014-01-30
Teemu Murtola
Refactor ProgramInfo use
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2014-01-30
Teemu Murtola
Move command listing to 'gmx help commands'
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2014-01-29
Teemu Murtola
Fixes to filename shell completions
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2014-01-29
Teemu Murtola
Print common options to 'gmx -h'
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2014-01-29
Teemu Murtola
Merge "Merge branch 'release-4-6'"
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2014-01-28
Teemu Murtola
Shell completion export from the wrapper binary
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2014-01-28
Teemu Murtola
Extend version information output
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2014-01-27
Teemu Murtola
Simplify ProgramInfo
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2014-01-22
Teemu Murtola
Use local ProgramInfo in CommandLineModuleManager
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2014-01-21
Teemu Murtola
Remove unused split.h
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2014-01-21
Teemu Murtola
Improve file name option help
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2014-01-20
Teemu Murtola
Fix test reference data
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2014-01-20
Teemu Murtola
Rewrite help output from Options
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