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Remove check that auto-generated files exist
2014-08-17
Roland Schulz
Remove check that auto-generated files exist
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2014-08-17
Roland Schulz
Use full path for legacyheaders
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2014-08-14
Berk Hess
Corrected SIMD math overflow documentation
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2014-08-13
Teemu Murtola
Use native CMake mechanism for find_package(GROMACS)
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2014-08-13
Teemu Murtola
Reorganize CMake version information management
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2014-08-11
Roland Schulz
Move some verlet headers to mdlib
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2014-08-11
Mark Abraham
Add depressing quote
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2014-08-10
Erik Lindahl
Improve Gromacs portability
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2014-08-10
Erik Lindahl
Replace __LP64__ with check for pointer size
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2014-08-10
Berk Hess
Added checks for TPI + Verlet scheme
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2014-08-10
Roland Schulz
Check MD5sum for regressiontest
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2014-08-07
Erik Lindahl
Fix portability issue with ArrayRef initializer overloading
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2014-08-07
Erik Lindahl
Changed names of test files to avoid Fujitsu compiler bug
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2014-08-05
Berk Hess
Fix hang with LJ-PME and empty domains
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2014-08-05
Roland Schulz
Workaround for ICC 14
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2014-08-01
Erik Lindahl
Added tests for denormal and underflow for simd exp()
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2014-07-31
Teemu Murtola
Merge "Merge release-5-0 into master"
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2014-07-31
Roland Schulz
Replace most strdup with gmx_strdup
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2014-07-29
Mark Abraham
Converted md_support.c to C++
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2014-07-28
Roland Schulz
Merge "Merge release-5-0 into master"
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2014-07-28
Roland Schulz
Fix build of binary package
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2014-07-28
Roland Schulz
Remove Random123/features
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2014-07-27
Roland Schulz
Remove memtest
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2014-07-25
Roland Schulz
Workaround for ICC 14 bug
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2014-07-24
Roland Schulz
Fix Cygwin+Shared-Libs+FFTW
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2014-07-21
Roland Schulz
Fix GMX_NONBONDED_NUM_THREADS!=GMX_PAIRSEARCH_NUM_THREADS
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2014-07-16
Mark Abraham
Quiet gcc-4.8 warnings about unused results
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2014-07-16
Teemu Murtola
Fix HTML help and man pages for commands with dashes
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2014-07-13
Erik Lindahl
Avoid clang/32 optimization affecting IEEE endian detection
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2014-07-12
Teemu Murtola
Make gmx_node_num/rank safer
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2014-07-11
Teemu Murtola
Fix HTML links that contain file extensions
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2014-07-09
Mark Abraham
Quieten repeated cmake runs
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2014-07-09
Roland Schulz
Add comments for code with race condition
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2014-07-09
Roland Schulz
Fix Cygwin build
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2014-07-09
Roland Schulz
Remove all unnecessary HAVE_CONFIG_H
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2014-07-09
Teemu Murtola
Module dependency cycle checker for 'doc-check'
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2014-07-08
Erik Lindahl
Make IEEE754 check more robust
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2014-07-08
Teemu Murtola
Remove PCA_QUIET
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2014-07-08
Teemu Murtola
Additional index group checks for selections
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2014-07-08
Teemu Murtola
Clean up program name handling in oenv
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2014-07-08
Teemu Murtola
Improve FileNameOption error handling
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2014-07-08
Teemu Murtola
Make selections ignore \r in input
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2014-07-08
Teemu Murtola
Change some gmx_unique_ptr to shared_ptr in public...
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2014-07-08
Mark Abraham
Remove bOK from MD loop
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2014-07-08
Teemu Murtola
Move -debug to cmdlinemodulemanager.cpp
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2014-07-07
Mark Abraham
Fix tarball and install, particularly for INSTALL
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2014-07-05
Magnus Lundborg
Fix bug causing reading next frame not to stop.
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2014-07-05
Magnus Lundborg
Fix tng_num_frame_sets_get() with no frame sets.
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2014-07-05
Teemu Murtola
Reinstantiate unsorted index group check
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2014-07-05
David van der Spoel
Fixed inconsistency in blocka handling.
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2014-07-05
Roland Schulz
Add running tests to install-guide
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2014-07-05
Teemu Murtola
Update some installation-related docs
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2014-07-01
Mark Abraham
Fix GMock to work on MSVC
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2014-06-29
Mark Abraham
Refer to "mixed" precision in user-facing documentation
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2014-06-29
Berk Hess
Take LJ-PME into account for table spacing
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2014-06-29
Erik Lindahl
Fixed free energy with LJ-PME
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2014-06-29
Mark Abraham
Convert install guide to markdown
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2014-06-29
Mark Abraham
Merge "Merge release-4-6 into release-5-0" into release-5-0
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2014-06-29
Berk Hess
Updated LJ-PME documentation
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2014-06-29
Rossen Apostolov
Use cosistent style when referring to force fields.
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2014-06-29
Teemu Murtola
Remove some hardcoded selection string buffers
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2014-06-29
Roland Schulz
Fix detection of i386 in tmpi
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2014-06-29
Erik Lindahl
Enable rtp angle/dihedral entries not connected by...
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2014-06-29
Michael Shirts
Allow printing potential energies to dhdl.xvg file
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2014-06-29
David van der Spoel
Fixes #1532, SEGV in g_current.
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2014-06-29
Roland Schulz
Merge "Merge branch 'release-4-6' into release-5-0...
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2014-06-28
Roland Schulz
Fix error for no 64bit file support
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2014-06-28
Erik Lindahl
Fixed CMAP generation for alanine dipeptide special...
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2014-06-28
Magnus Lundborg
Update TNG build system
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2014-06-28
Mark Abraham
Use parallel terminology more consistently
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2014-06-28
ngoga
Default SD integrator is now sd1 by Nicu Goga
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2014-06-27
Erik Lindahl
Always set b-state posres, even if identical to a-state
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2014-06-27
Erik Lindahl
Update g_density to handle bilayers better
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2014-06-27
Erik Lindahl
Fix LJPME Lorentz-Berthelot combination rules
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2014-06-27
Rossen Apostolov
Changed linking order to make Extrae work.
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2014-06-27
Erik Lindahl
Improve PDB I/O (keep occupancy, b-factor, element)
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2014-06-27
Carsten Kutzner
Remove obsolete pull-geometry option 'position' from...
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2014-06-27
Roland Schulz
Fix Phi Platform file for MPI
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2014-06-27
Erik Lindahl
Avoid warnings about coupling when free_energy=no
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2014-06-27
Rossen Apostolov
Added information about dihedral restraints.
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2014-06-27
Rossen Apostolov
Remove install_manifest.txt during make clean.
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2014-06-26
Mark Abraham
Merge "Merge release-4-6 into release-5-0" into release-5-0
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2014-06-25
Erik Lindahl
Updated Amber GBSA parameters
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2014-06-25
Erik Lindahl
Make source compile under Linux X32 ABI
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2014-06-25
Erik Lindahl
Make it harder for compiler to optimize away SIMD CMake...
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2014-06-24
Mark Abraham
Manual fixes
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2014-06-24
Magnus Lundborg
Improved check to decide if to add chain/residue.
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2014-06-24
David van der Spoel
Added check in grompp for shells and inputrec issues.
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2014-06-24
Erik Lindahl
Fixed GROMOS assignment of PRO-NH terminus torsions
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2014-06-24
Erik Lindahl
Make sure duplicates bondeds are set from hackblocks
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2014-06-24
Erik Lindahl
Clean up CMAP placement in parameter list
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2014-06-24
Erik Lindahl
Added multisimulation info to log/output
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2014-06-24
Rossen Apostolov
Extend version checking/warnings for checkpoint continuation
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2014-06-24
Mark Abraham
Converted runner.c to C++
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2014-06-24
Paul van Maaren
Increased precision of distance output
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2014-06-23
Rossen Apostolov
Added tip5p to the list of watermodels in some FF.
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2014-06-23
Erik Lindahl
Enable 4-letter resname in PDB output, keeps more pdbinfo.
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2014-06-23
Erik Lindahl
Detect non-fatal warnings when trying CFlags for source
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2014-06-23
Erik Lindahl
Enable xvgr output and labels for g_principal
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2014-06-23
Erik Lindahl
Disallow extracting V/F from XTC files in g_traj
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