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Merge "Add histogram output for 'gmx gangle'."
[alexxy/gromacs.git]
/
src
/
2013-04-12
David van der Spoel
Merge "Add histogram output for 'gmx gangle'."
tree
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commitdiff
2013-03-26
Teemu Murtola
Add histogram output for 'gmx gangle'.
tree
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commitdiff
2013-03-24
Teemu Murtola
Merge libgmxana into libgromacs.
tree
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commitdiff
2013-03-22
Roland Schulz
Fix problems with intel-mpi
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commitdiff
2013-03-22
Teemu Murtola
Merge "Merge release-4-6 into master"
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commitdiff
2013-03-20
Roland Schulz
Merge release-4-6 into master
tree
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commitdiff
2013-03-08
Teemu Murtola
Better test assertions for exceptions.
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commitdiff
2013-03-07
Teemu Murtola
Improve enum option interface.
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commitdiff
2013-03-07
Teemu Murtola
More flexible handling of enum option descriptions.
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commitdiff
2013-03-07
Teemu Murtola
Fix copyright notices for new C++ code.
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commitdiff
2013-03-07
Teemu Murtola
Update my e-mail address on author lines.
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commitdiff
2013-03-07
Teemu Murtola
Merge "Uncrustify template.cpp and selection.cpp."
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commitdiff
2013-03-07
Teemu Murtola
Merge "Merge release-4-6 into master"
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commitdiff
2013-03-06
Roland Schulz
Merge "fixed PME time print with -ntomp_pme != -ntomp...
tree
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commitdiff
2013-03-05
Berk Hess
fixed bug with DD cut-off check and PME DLB
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commitdiff
2013-03-05
Berk Hess
fixed recent bug with sorting atoms for GPUs
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commitdiff
2013-03-02
Christoph Junghans
Merge "Uncrustified code changes since 4.6" into releas...
tree
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commitdiff
2013-02-28
Peter Kasson
Declaration-definition consistency nbxn_cuda_wait_gpu.
tree
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commitdiff
2013-02-26
Berk Hess
fixed PME time print with -ntomp_pme != -ntomp
tree
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commitdiff
2013-02-26
Roland Schulz
Merge release-4-6 into master
tree
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commitdiff
2013-02-26
Christoph Junghans
Merge "Merge release-4-6 into master"
tree
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commitdiff
2013-02-26
Mark Abraham
Uncrustified code changes since 4.6
tree
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commitdiff
2013-02-25
Teemu Murtola
Uncrustify template.cpp and selection.cpp.
tree
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commitdiff
2013-02-25
Michael Shirts
fix imcompatibility with tpr vers<64 with free energy...
tree
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commitdiff
2013-02-20
Berk Hess
fixed issues with FEP soft-core and cut-off's
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commitdiff
2013-02-20
Mark Abraham
Merge release-4-5-patches into release-4-6
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commitdiff
2013-02-18
Berk Hess
fixed GPU particle gridding performance issue
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commitdiff
2013-02-18
Carsten Kutzner
Made g_tune_pme work with 4.6 if user sets "-p" command...
tree
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commitdiff
2013-02-16
Roland Schulz
Add missing include
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commitdiff
2013-02-15
Michael Shirts
bugfix for md-vv + nose-hoover + (nstcalcenergy > nsttc...
tree
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commitdiff
2013-02-15
Mark Abraham
Use explicit kernel pointer typecasts
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commitdiff
2013-02-15
Mark Abraham
Merge "Minor fixes to Verlet kernels" into release-4-6
tree
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commitdiff
2013-02-15
Mark Abraham
Merge "improved PME load balancing reporting" into...
tree
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commitdiff
2013-02-15
Mark Abraham
Merge "Re-generated group kernels" into release-4-6
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commitdiff
2013-02-15
Mark Abraham
Merge "Unwinds flag dependencies in g_order." into...
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commitdiff
2013-02-15
David van der Spoel
Merge "Fixed an initialization issue in gmx_dipoles...
tree
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commitdiff
2013-02-15
Mark Abraham
Merge "use legacy CUDA non-bonded kernels only on Fermi...
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commitdiff
2013-02-15
Mark Abraham
Merge "More descriptive Verlet kernel macro parameter...
tree
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commitdiff
2013-02-15
Sander Pronk
Fixed an initialization issue in gmx_dipoles.
tree
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commitdiff
2013-02-15
Berk Hess
improved PME load balancing reporting
tree
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commitdiff
2013-02-15
Mark Abraham
Minor fixes to Verlet kernels
tree
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commitdiff
2013-02-15
Peter Kasson
Unwinds flag dependencies in g_order.
tree
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commitdiff
2013-02-15
Mark Abraham
Merge "Fix and add Verlet kernel error messages" into...
tree
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commitdiff
2013-02-13
Teemu Murtola
Fix velocity and force evaluation for empty selections.
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commitdiff
2013-02-13
Teemu Murtola
Change ConstArrayRef constructor argument order.
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commitdiff
2013-02-13
Teemu Murtola
Add continuous array accessors for selection data.
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commitdiff
2013-02-13
Teemu Murtola
Add tests for selection mass evaluation and fix it.
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commitdiff
2013-02-13
Sander Pronk
Merge "Fix code bug with thread-MPI on PowerPC with...
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commitdiff
2013-02-13
Roland Schulz
Merge "Fixed the MPI recognition string in g_tune_pme...
tree
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commitdiff
2013-02-13
Roland Schulz
Merge "improve setup of multiple tf tables" into releas...
tree
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commitdiff
2013-02-13
Roland Schulz
Merge release-4-6 into master
tree
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commitdiff
2013-02-13
Roland Schulz
Merge release-4-6 into master
tree
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commitdiff
2013-02-13
Roland Schulz
Code beautification with uncrustify
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commitdiff
2013-02-13
David van der Spoel
Plain text quotes.
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commitdiff
2013-02-13
Mark Abraham
More descriptive Verlet kernel macro parameter names
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commitdiff
2013-02-13
Mark Abraham
Fix and add Verlet kernel error messages
tree
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commitdiff
2013-02-13
Mark Abraham
Re-generated group kernels
tree
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commitdiff
2013-02-13
Sander Pronk
Added extra check in for setaffinity support.
tree
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commitdiff
2013-02-13
Carsten Kutzner
Fixed the MPI recognition string in g_tune_pme
tree
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commitdiff
2013-02-13
Roland Schulz
Merge "Updated FindGSL.cmake to version written by...
tree
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commitdiff
2013-02-12
Mark Abraham
Merge "PME-only counters are now reset with -maxh ...
tree
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commitdiff
2013-02-12
Mark Abraham
Merge "fixed bug with sd integrator and OpenMP threadin...
tree
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commitdiff
2013-02-12
Mark Abraham
Merge "Fix CUDA_HOST_COMPILER flag name" into release-4-6
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commitdiff
2013-02-12
Mark Abraham
Merge "Remove duplicated clang section"
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commitdiff
2013-02-12
Mark Abraham
Merge "Manual reformatting in preparation for uncrustify."
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commitdiff
2013-02-12
Mark Abraham
Merge "Fix gmxcheck target"
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commitdiff
2013-02-10
Teemu Murtola
Manual reformatting in preparation for uncrustify.
tree
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commitdiff
2013-02-10
Szilárd Páll
use legacy CUDA non-bonded kernels only on Fermi
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commitdiff
2013-02-09
Roland Schulz
Merge "Typo fix" into release-4-6
tree
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commitdiff
2013-02-09
Mark Abraham
Typo fix
tree
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commitdiff
2013-02-08
Roland Schulz
Remove dummy.cpp
tree
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commitdiff
2013-02-08
Mark Abraham
Merge "added back cuda.h includes to fix missing CUDA_V...
tree
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commitdiff
2013-02-08
Mark Abraham
Merge "Fixed flop counting for generic cg/adress kernel...
tree
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commitdiff
2013-02-08
Mark Abraham
Merge "cmake: fixed typo in template CMakeLists.txt...
tree
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commitdiff
2013-02-06
Berk Hess
fixed bug with sd integrator and OpenMP threading
tree
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commitdiff
2013-02-05
Christoph Junghans
Merge "Documented what GMX_CPU_ACCELERATION really...
tree
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commitdiff
2013-02-05
Christoph Junghans
improve setup of multiple tf tables
tree
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commitdiff
2013-02-05
Mark Abraham
Merge "improved load balancing on the GPU" into release-4-6
tree
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commitdiff
2013-02-05
Berk Hess
improved load balancing on the GPU
tree
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commitdiff
2013-02-04
Berk Hess
fixed segv in init_forcerec with fr->hwinfo=NULL
tree
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commitdiff
2013-02-02
Christoph Junghans
Fixed flop counting for generic cg/adress kernels
tree
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commitdiff
2013-02-01
Berk Hess
PME-only counters are now reset with -maxh -resethway
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commitdiff
2013-01-29
Sebastian Fritsch
AdResS: fixes bug in the neighbour list routine
tree
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commitdiff
2013-01-25
Christoph Junghans
fixed copyright of adress kernel
tree
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commitdiff
2013-01-25
Christoph Junghans
Merge "Moved a few comments back into position" into...
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commitdiff
2013-01-24
Han Wang
fix invalid read in construct_vsites
tree
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commitdiff
2013-01-24
Szilard Pall
added back cuda.h includes to fix missing CUDA_VERSION
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commitdiff
2013-01-22
Mark Abraham
Merge "Re-licenced FindGROMACS.cmake (was written by...
tree
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commitdiff
2013-01-22
Mark Abraham
Merge "Fix TOUPPER usage" into release-4-6
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commitdiff
2013-01-22
Mark Abraham
Merge "Updated html manual to 4.6" into release-4-6
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commitdiff
2013-01-22
Mark Abraham
Merge "added missing cleanup of some nbnxn_cuda data...
tree
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commitdiff
2013-01-22
Carsten Kutzner
Moved a few comments back into position
tree
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commitdiff
2013-01-21
Christoph Junghans
Merge "Set version info for 4.6.x release series" into...
tree
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commitdiff
2013-01-21
Roland Schulz
Merge release-4-6 into master
tree
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commitdiff
2013-01-20
Roland Schulz
Merge release-4-6 into master
tree
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commitdiff
2013-01-19
Roland Schulz
Fix AVX double compile error
tree
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commitdiff
2013-01-18
Roland Schulz
Merge release-4-5-patches into release-4-6
tree
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commitdiff
2013-01-18
Roland Schulz
Code beautification with uncrustify
tree
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commitdiff
2013-01-18
Roland Schulz
Add colon after macro to help uncrustify
tree
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commitdiff
2013-01-18
Berk Hess
thread affinity now uses some topology information
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commitdiff
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