Merge release-4-6 into master
authorRoland Schulz <roland@utk.edu>
Wed, 13 Feb 2013 21:01:16 +0000 (16:01 -0500)
committerRoland Schulz <roland@utk.edu>
Wed, 13 Feb 2013 21:01:16 +0000 (16:01 -0500)
commit0c77aae90fbf9e0528d017cae45179a9a9982acf
tree9b7d5c47d9f930e6215b57ae6665dc0d4628a038
parentc5cb103584f8046d87ec0b72417f51c57f2e32fc
parent385e1b46b2886c5c09a8a3e4b36806b5f486b264
Merge release-4-6 into master

Conflicts (all trivial):
        CMakeLists.txt
        admin/mkhtml
        share/template/CMakeLists.txt
        src/gromacs/gmxlib/nonbonded/nb_generic_adress.c
        src/gromacs/gmxlib/nonbonded/nb_kernel_avx_256_double/nb_kernel_template_avx_256_double.pre

Manual changes:
        CMakeLists.txt: Reverted change to CPACK_PACKAGE_VERSION_PATCH

Change-Id: Ib38fbbdd5d3d7e531d4e1db0229d6305b84bbd6b
20 files changed:
CMakeLists.txt
admin/mkhtml
share/html/online.html
share/html/online/getting_started.html
src/gromacs/gmxlib/nonbonded/nb_generic_adress.c
src/gromacs/gmxlib/nonbonded/nb_generic_cg.c
src/gromacs/gmxlib/nonbonded/nb_kernel_avx_256_double/nb_kernel_ElecGB_VdwCSTab_GeomP1P1_avx_256_double.c
src/gromacs/gmxlib/nonbonded/nb_kernel_avx_256_double/nb_kernel_ElecGB_VdwLJ_GeomP1P1_avx_256_double.c
src/gromacs/gmxlib/nonbonded/nb_kernel_avx_256_double/nb_kernel_ElecGB_VdwNone_GeomP1P1_avx_256_double.c
src/gromacs/gmxlib/nonbonded/nb_kernel_avx_256_double/nb_kernel_template_avx_256_double.pre
src/gromacs/gmxlib/nrnb.c
src/gromacs/gmxpreprocess/readir.c
src/gromacs/legacyheaders/types/nrnb.h
src/gromacs/mdlib/forcerec.c
src/gromacs/mdlib/nbnxn_cuda/nbnxn_cuda.cu
src/gromacs/mdlib/nbnxn_cuda/nbnxn_cuda_data_mgmt.cu
src/gromacs/mdlib/nbnxn_internal.h
src/gromacs/mdlib/nbnxn_search.c
src/gromacs/mdlib/ns.c
src/gromacs/mdlib/pull_rotation.c