Move finalising routine into mtop
[alexxy/gromacs.git] / src / gromacs / topology / mtop_util.cpp
2020-07-07 Christian BlauMove finalising routine into mtop
2020-07-01 Roland SchulzSimplify Iterators
2020-06-05 Paul BauerUse moltype directly for obtaining residueAtomRanges
2020-06-02 Paul BauerAdd function to get residue start and end
2020-05-06 Paul BauerMerge branch 'origin/release-2020' into master
2020-03-16 Christian BlauRemove dysfunctional QMMM interface pt1
2020-03-05 Berk HessAdd InteractionDefinitions
2020-03-04 Paul BauerMerge branch release-2020 into master
2020-02-28 Paul BauerMerge branch release-2019 into release-2020
2020-02-05 Artem ZhmurovMove non-bonded initialization out of the forcerec
2020-02-01 Artem ZhmurovMerge "Merge branch origin/release-2020 into master"
2020-01-28 Paul BauerMerge branch origin/release-2020 into master
2020-01-17 Berk HessAdd check for shells and GPU update
2020-01-09 Mark AbrahamSplit lines with many copyright years
2020-01-08 Roland SchulzMerge release-2019 into release-2020
2020-01-07 Paul BauerMerge branch origin/release-2020 into master
2020-01-07 Paul BauerMerge commit d30f2cb6 from release-2020 into master
2019-12-27 Paul BauerMerge origin/release-2019 into release-2020
2019-12-19 Berk HessRemove exclusions from t_topology
2019-12-16 Berk HessUse ListOfLists in gmx_mtop_t and gmx_localtop_t
2019-11-29 Mark AbrahamMerge branch release-2019 into release-2020
2019-11-20 Paul BauerMerge 'origin/release-2019' into release-2020
2019-11-07 Paul BauerApply clang-format to source tree
2019-10-29 Paul BauerMerge branch 'release-2019' into master
2019-10-24 Berk HessAdd gmx_mtop_interaction_count()
2019-10-01 Berk HessCompletely remove charge groups
2019-09-25 Szilárd PállMerge remote-tracking branch 'origin/release-2019'
2019-09-24 Paul BauerMerge branch release-2019 into master
2019-09-22 Berk HessRemove cgs_gl from gmx_domdec_comm_t
2019-08-22 Mark AbrahamMerge branch release-2019
2019-08-01 Paul BauerMerge release-2019 into master
2019-06-14 Paul BauerMerge branch release-2018 into release-2019
2019-04-18 Berk HessRemove charge groups from domdec and localtop
2019-03-02 Mark AbrahamMerge branch release-2019
2019-02-25 Paul BauerRefactor ExclusionBlocks
2019-02-20 Paul BauerMerge branch 'release-2019' into master
2019-02-07 Roland SchulzRevert size to be unsigned for ArrayRef
2019-02-07 Roland SchulzAdd ssize and remove static_casts
2019-01-30 Mark AbrahamMerge remote branch release-2018 into release-2019
2019-01-26 Roland SchulzFix clang warning
2019-01-23 Roland SchulzMerge release-2019 into master
2019-01-23 Roland SchulzMerge release-2018 into release-2019
2019-01-23 Roland SchulzTurn SystemAtomIterator into proper iterator
2019-01-18 Paul BauerChange one gmx_mtop_t atom loop to C++
2019-01-04 Paul BauerChange gmx_localtop_t to C++
2018-12-31 Paul BauerMerge branch release-2018 into release-2019
2018-12-17 Paul BauerMerge branch release-2018 into release-2019
2018-11-22 Mark AbrahamMerge "Merge branch 'release-2019'"
2018-11-21 David van der SpoelMerge branch 'release-2019'
2018-11-21 Paul BauerMerge branch release-2018 into release-2019
2018-11-09 David van der SpoelChange get_atom_index to allow multiple molecules.
2018-10-26 Mark AbrahamMerge branch release-2018 into release-2019
2018-10-15 Mark AbrahamCreate ExclusionBlocks
2018-10-13 Viacheslav BolnykhUpdated name of intemolecular exclusions function
2018-10-12 Viacheslav BolnykhImplemented QM/MM workflow inside core GROMACS
2018-10-01 Paul BauerChange get_atom_index to return int
2018-09-20 Paul BauerSeparate methods to create localtop and t_topology
2018-09-19 Berk HessConvert gmx_cmap_t to C++
2018-09-19 Berk HessConvert gmx_ffparams_t to C++
2018-09-14 Berk HessChange gmx_moltype_t.ilist to InteractionLists
2018-09-13 Berk HessAdd C++ version of t_ilist
2018-08-29 Mark AbrahamMerge branch release-2018
2018-08-24 Mark AbrahamMerge branch release-2018
2018-08-18 Roland Schulzclang-tidy modernize
2018-08-08 Roland SchulzFix part of old-style casting
2018-07-04 Roland SchulzMerge release-2018 into master
2018-06-28 Berk HessChange BlockRanges to class RangePartitioning
2018-06-05 Mark AbrahamMake Constraints a proper class
2018-05-03 Mark AbrahamMerge branch release-2018
2018-04-17 Paul BauerFix legacy topology memory error
2018-04-16 Berk HessMove natoms_mol out of gmx_molblock_t
2018-04-13 Mark AbrahamMerge branch release-2018
2018-04-09 Berk HessConvert gmx_molblock_t to C++
2018-04-03 Berk HessConvert gmx_mtop_t to C++
2018-04-03 Mark AbrahamMerge "Merge branch release-2018"
2018-03-28 Berk HessRemove mols from gmx_mtop_t
2018-03-20 Mark AbrahamMerge branch release-2016 into release-2018
2018-02-16 Mark AbrahamMerge branch release-2016 into release-2018
2018-02-14 Mark AbrahamMerge branch release-2016 into release-2018
2018-02-08 Mark AbrahamMerge branch release-2016 into release-2018
2018-01-09 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-22 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-21 Mark AbrahamMerge branch release-5-1 into release-2016
2017-12-20 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-12 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-04 Mark AbrahamMerge branch release-2016 into release-2018
2017-11-02 Mark AbrahamMerge branch release-2016
2017-10-20 Mark AbrahamMerge branch release-2016
2017-10-16 Mark AbrahamMerge branch release-2016
2017-09-17 Mark AbrahamMerge branch release-2016
2017-09-12 Mark AbrahamMerge branch release-2016
2017-09-12 Szilárd PállMerge branch 'release-2016'
2017-09-03 Mark AbrahamMerge branch release-5-1 into release-2016
2017-08-22 Mark AbrahamMerge branch release-2016
2017-08-15 Mark AbrahamMerge branch release-5-1 into release-2016
2017-06-28 Mark AbrahamMerge branch release-2016
2017-06-27 Roland SchulzMerge branch release-2016
2017-05-09 Mark AbrahamMerge branch release-2016
2017-03-31 Mark AbrahamMerge branch release-2016
2017-03-14 Mark AbrahamMerge branch release-2016
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