Merge branch release-2016
authorMark Abraham <mark.j.abraham@gmail.com>
Mon, 21 Aug 2017 23:51:09 +0000 (01:51 +0200)
committerMark Abraham <mark.j.abraham@gmail.com>
Tue, 22 Aug 2017 11:19:22 +0000 (13:19 +0200)
commitc5923ece79c998f6cec7f11237aaac3ef8a9d2ef
tree02c350397f227bc96157ac059f7efdf17217b4c1
parent947fe55223fb401f31e869ccdbf9c6743e4f286b
parent54042f4ba49b388064806cd60a497bf3d24a4e3a
Merge branch release-2016

Made matching change for ARM NEON SIMD to newly refactored SIMD code

Trivial resolutions of adjacent changes in CUDA kernel code.

Adjacent resolutions for changes for dynamic pruning and disabling
of PME tuning for the group scheme need checking.

Change-Id: I024878fa50ba815960d00ad6e811af181323b4db
18 files changed:
cmake/gmxDetectSimd.cmake
cmake/gmxManageNvccConfig.cmake
cmake/gmxManageSimd.cmake
docs/CMakeLists.txt
docs/manual/algorithms.tex
docs/manual/special.tex
src/gromacs/ewald/pme-load-balancing.cpp
src/gromacs/gmxana/gmx_msd.cpp
src/gromacs/gpu_utils/cuda_arch_utils.cuh
src/gromacs/gpu_utils/cudautils.cu
src/gromacs/gpu_utils/cudautils.cuh
src/gromacs/mdlib/forcerec.cpp
src/gromacs/mdlib/nbnxn_cuda/nbnxn_cuda_kernel.cuh
src/gromacs/mdlib/nbnxn_cuda/nbnxn_cuda_kernel_utils.cuh
src/gromacs/mdrunutility/handlerestart.cpp
src/gromacs/simd/impl_arm_neon_asimd/impl_arm_neon_asimd_simd_double.h
src/programs/mdrun/md.cpp
src/programs/mdrun/mdrun.cpp