BioD PNPI Git Repos - alexxy/gromacs.git/history - share/html/online/mdp

biod.pnpi.spb.ru / alexxy / gromacs.git / history

[alexxy/gromacs.git] / share / html / online / mdp_opt.html

2013-12-02	Berk Hess	Renamed verlet-buffer-drift to verlet-buffer-tolerance	blob \| commitdiff \| raw
2013-12-02	Roland Schulz	Merge "Merge branch 'release-4-6'"	blob \| commitdiff \| raw \| diff to current
2013-12-02	Christian Wennberg	Calculating LJ-interactions using Particle mesh Ewald	blob \| commitdiff \| raw \| diff to current
2013-12-02	Mark Abraham	Merge branch 'release-4-6'	blob \| commitdiff \| raw \| diff to current
2013-11-28	Teemu Murtola	Uniform headers in HTML pages	blob \| commitdiff \| raw \| diff to current
2013-11-15	Erik Lindahl	Merge "Merge branch release-4-6"	blob \| commitdiff \| raw \| diff to current
2013-11-15	Mark Abraham	Merge branch release-4-6	blob \| commitdiff \| raw \| diff to current
2013-11-13	Mark Abraham	Fix minor things before release	blob \| commitdiff \| raw \| diff to current
2013-10-30	Roland Schulz	Merge release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2013-10-23	Mark Abraham	Merge branch release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2013-09-26	Teemu Murtola	Merge "Merge branch release-4-6"	blob \| commitdiff \| raw \| diff to current
2013-09-26	Mark Abraham	Remove General Coupling Theory stuff	blob \| commitdiff \| raw \| diff to current
2013-09-23	Teemu Murtola	Merge "Merge branch 'release-4-6'"	blob \| commitdiff \| raw \| diff to current
2013-09-20	Mark Abraham	Merge branch 'release-4-6'	blob \| commitdiff \| raw \| diff to current
2013-09-16	Michael Shirts	Fixing manual for sc-coul description.	blob \| commitdiff \| raw \| diff to current
2013-07-24	Roland Schulz	Merge "Merge branch release-4-6 into master"	blob \| commitdiff \| raw \| diff to current
2013-07-24	Mark Abraham	Merge branch release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2013-07-07	Mark Abraham	Fixed minor admin issues	blob \| commitdiff \| raw \| diff to current
2013-05-30	Mark Abraham	Merge "Merge branch 'release-4-6'"	blob \| commitdiff \| raw \| diff to current
2013-05-24	Teemu Murtola	Merge branch 'release-4-6'	blob \| commitdiff \| raw \| diff to current
2013-05-21	Mark Abraham	Updated grompp cut-off and PME-Switch checks	blob \| commitdiff \| raw \| diff to current
2013-04-19	Teemu Murtola	Merge branch 'release-4-5-patches'	blob \| commitdiff \| raw \| diff to current
2013-03-26	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-02-20	Mark Abraham	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-02-13	Roland Schulz	Merge release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2013-02-08	Mark Abraham	Merge "cmake: fixed typo in template CMakeLists.txt...	blob \| commitdiff \| raw \| diff to current
2013-01-25	Christoph Junghans	Merge "Moved a few comments back into position" into...	blob \| commitdiff \| raw \| diff to current
2013-01-22	Mark Abraham	Merge "Re-licenced FindGROMACS.cmake (was written by...	blob \| commitdiff \| raw \| diff to current
2013-01-22	Mark Abraham	Merge "Updated html manual to 4.6" into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-22	Mark Abraham	Merge "added missing cleanup of some nbnxn_cuda data...	blob \| commitdiff \| raw \| diff to current
2013-01-22	Roland Schulz	Updated html manual to 4.6	blob \| commitdiff \| raw \| diff to current
2013-01-21	Roland Schulz	Merge release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2013-01-20	Roland Schulz	Merge release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2013-01-18	Michael Shirts	Addendum for expanded ensemble options plus formatting...	blob \| commitdiff \| raw \| diff to current
2013-01-18	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-17	Mark Abraham	Merge "Remove unnecessary ICC flags affecting performan...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Mark Abraham	Merge "improved CUDA kernel performance by pre-loading...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Christoph Junghans	Merge "Added note about make_edi and flooding in ED...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Christoph Junghans	Merge "use the compiler version provided by CMake ...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Mark Abraham	Merge branch 'release-4-5-patches' into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-17	Christoph Junghans	Merge "note the reason for auto-disabling GPU support...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Mark Abraham	Merge "Added mdp option 'calc-lambda-neighbors'." into...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Roland Schulz	Merge "clarify wording of GPU driver-related notes...	blob \| commitdiff \| raw \| diff to current
2013-01-17	Sander Pronk	Added mdp option 'calc-lambda-neighbors'.	blob \| commitdiff \| raw \| diff to current
2013-01-17	Sander Pronk	Fixes to free energy code, output & g_bar compatibility.	blob \| commitdiff \| raw \| diff to current
2013-01-15	Roland Schulz	Merge release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2013-01-15	Mark Abraham	Merge "Hid nbnxn kernel names behind a lookup function...	blob \| commitdiff \| raw \| diff to current
2013-01-15	Christoph Junghans	Merge "disable OpenMP with all OS X gcc 4.2-based compi...	blob \| commitdiff \| raw \| diff to current
2013-01-15	Sander Pronk	Merge "Continuation of documentation for expanded ensem...	blob \| commitdiff \| raw \| diff to current
2013-01-15	Michael Shirts	Continuation of documentation for expanded ensemble.	blob \| commitdiff \| raw \| diff to current
2013-01-11	Christoph Junghans	Merge "Fix CUDA being quiet and mark all CUDA_* as...	blob \| commitdiff \| raw \| diff to current
2013-01-11	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2013-01-11	Roland Schulz	Merge "Handle compiler flags more flexibly" into releas...	blob \| commitdiff \| raw \| diff to current
2013-01-11	Christoph Junghans	Merge "Remove incorrect assert added by 05f9a740" into...	blob \| commitdiff \| raw \| diff to current
2013-01-10	Mark Abraham	Merge "Revert default rlist/rvdw/rcoulomb to valid...	blob \| commitdiff \| raw \| diff to current
2013-01-10	Erik Lindahl	Revert default rlist/rvdw/rcoulomb to valid values...	blob \| commitdiff \| raw \| diff to current
2012-11-26	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-11-20	Christoph Junghans	Merge "Fix g_msd -mol" into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-11-20	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-11-17	Roland Schulz	Merge "Removing Zn and Ar non-OPLS atom types" into...	blob \| commitdiff \| raw \| diff to current
2012-11-12	Christoph Junghans	Merge "Option to create symlinks to g_ana."	blob \| commitdiff \| raw \| diff to current
2012-11-12	Christoph Junghans	Merge "Always use relative install paths."	blob \| commitdiff \| raw \| diff to current
2012-11-10	Roland Schulz	Merge release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2012-11-10	Roland Schulz	Merge "Fix broken manual formatting" into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-11-10	Mark Abraham	Fix broken manual formatting	blob \| commitdiff \| raw \| diff to current
2012-11-09	Roland Schulz	Merge origin/release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2012-11-08	Christoph Junghans	Merge "auto-set nvcc host compiler with FindMPI detecti...	blob \| commitdiff \| raw \| diff to current
2012-11-08	Erik Lindahl	Infrastructure for new group kernels, and new C kernels	blob \| commitdiff \| raw \| diff to current
2012-11-06	Roland Schulz	Merge "Clarification of mdp_opt, add nstexpand defaults...	blob \| commitdiff \| raw \| diff to current
2012-11-06	Michael Shirts	Clarification of mdp_opt, add nstexpand defaults &...	blob \| commitdiff \| raw \| diff to current
2012-11-03	Roland Schulz	Merge release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2012-11-03	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-10-26	Christoph Junghans	Merge "enable GMX_PREFER_STATIC_LIBS CMake option on...	blob \| commitdiff \| raw \| diff to current
2012-10-26	Christoph Junghans	Merge "fix false positive gcc 4.7 warning in libxdrf...	blob \| commitdiff \| raw \| diff to current
2012-10-26	Roland Schulz	Merge "set the default for nstdhdl to 100" into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-10-26	Berk Hess	set the default for nstdhdl to 100	blob \| commitdiff \| raw \| diff to current
2012-10-17	Roland Schulz	Merge branch 'release-4-6', adds the nbnxn functionality	blob \| commitdiff \| raw \| diff to current
2012-10-17	Kasson	Merge "Make Gromacs compile without C++ compiler" into...	blob \| commitdiff \| raw \| diff to current
2012-10-08	Berk Hess	made non-bonded potential shifts mdp options	blob \| commitdiff \| raw \| diff to current
2012-10-04	Kasson	Merge "Support C++11 <regex> as alternative to POSIX...	blob \| commitdiff \| raw \| diff to current
2012-10-04	Kasson	Merge "Encapsulate regexp use in selections."	blob \| commitdiff \| raw \| diff to current
2012-10-04	Roland Schulz	Merge release-4-6 into master	blob \| commitdiff \| raw \| diff to current
2012-10-02	Szilard Pall	added Verlet scheme and NxN non-bonded functionality	blob \| commitdiff \| raw \| diff to current
2012-10-01	Roland Schulz	Merge release-4-5-patches into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-09-03	Kasson	Merge "Document correct comm_mode option" into release...	blob \| commitdiff \| raw \| diff to current
2012-09-03	Szilard Pall	Merge branch 'release-4-5-patches' into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-08-28	Mark Abraham	Document correct comm_mode option	blob \| commitdiff \| raw \| diff to current
2012-07-13	Roland Schulz	Merge release-4.5-patches into HEAD	blob \| commitdiff \| raw \| diff to current
2012-07-10	Roland Schulz	Merge remote-tracking branch 'origin/release-4-6' into...	blob \| commitdiff \| raw \| diff to current
2012-07-05	Christoph Junghans	Merge "Don't rerun checks and be quiet 2nd time cmake...	blob \| commitdiff \| raw \| diff to current
2012-07-05	Christoph Junghans	Merge "Allow also FindMPI for cmake<2.8.5" into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-07-05	Christoph Junghans	Merge "Finalized and extended Szilard's openMP cleanup...	blob \| commitdiff \| raw \| diff to current
2012-07-04	Roland Schulz	Merge "Add FindGROMACS.cmake to template's CMakeLists...	blob \| commitdiff \| raw \| diff to current
2012-07-04	Roland Schulz	Merge "Fixed bug in free energy calculation for Morse...	blob \| commitdiff \| raw \| diff to current
2012-07-04	Berk Hess	set default for rcoulomb, rvdw and rlist to -1	blob \| commitdiff \| raw \| diff to current
2012-06-26	Roland Schulz	Merge "Make sure that found Boost version is new enough"	blob \| commitdiff \| raw \| diff to current
2012-06-26	Teemu Murtola	Merge "Merge remote-tracking branch 'origin/release...	blob \| commitdiff \| raw \| diff to current
2012-06-26	Roland Schulz	Merge "Fix gmx_fatal for serial compilation" into relea...	blob \| commitdiff \| raw \| diff to current
2012-06-24	Christoph Junghans	Merge "Remove MPI define for FAH" into release-4-6	blob \| commitdiff \| raw \| diff to current
2012-06-24	Roland Schulz	Merge remote-tracking branch 'origin/release-4-6'	blob \| commitdiff \| raw \| diff to current
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