Finalize gmxapi Python package version 0.2.
[alexxy/gromacs.git] / docs /
2021-01-21 Mark AbrahamEnsure residue name used by pdb2gmx matches rtp name
2021-01-19 Berk HessChange default MTS force group selection
2021-01-19 Mark AbrahamDeprecate mdrun -deffnm
2021-01-07 Paul BauerAdd new GROMACS logo
2021-01-07 Paul BauerMerge branch release-2020 into merge-2020-into-2021
2021-01-07 Christian BlauPrepare for GROMACS 2020.6
2021-01-06 Christian BlauGROMACS version 2020.5
2021-01-05 Szilárd PállUpdate src/regressiontests URLs to https
2021-01-01 Michael ShirtsExpanded ensemble changes.
2020-12-23 Mark AbrahamDeprecate .pdo file reading
2020-12-15 Mark AbrahamUpdate deprecation statuses
2020-12-14 Paul BauerFix pull group index handling
2020-12-14 Magnus LundborgFix incorrect AWH free-energy output with multiple...
2020-12-13 Simon ChristCorrect signs of lj and coulomb forces
2020-12-10 Berk HessA check for perturbed listed pairs beyond rlist
2020-12-09 Paul BauerFix indexing bug in electric field module
2020-12-09 Andrey AlekseenkoFix defining of EXCLUSION_FORCES in CUDA/OpenCL kernels
2020-12-07 Pascal MerzFix Nose-Hoover conserved energy
2020-12-02 Pascal MerzFix kinetic energy and temperatures reporting
2020-11-29 M. Eric IrrgangImprove accessibility of pytest documentation.
2020-11-26 Berk HessFix pull fatal error message
2020-11-25 Paul BauerFix error with links in docs
2020-11-24 Paul BauerMerge branch 'origin/release-2020' into merge-2020...
2020-11-24 Paul BauerFix gmx h2order -d option
2020-11-23 Paul BauerFixes for Intel and container build fixes
2020-11-13 Gilles GouaillardetDetect ARM SVE Vector length if possible
2020-11-11 Paul BauerFix gmx do_dssp CHARMM support
2020-11-10 Berk HessFix dHdl and foreign energy clearing at checkpointing
2020-11-10 Pascal MerzFix MTTK constant energy bugs
2020-11-09 Joe JordanAdd backend for nblib listed forces API
2020-11-09 Paul BauerUse images from GitLab docker repository
2020-11-09 Berk HessMove implementation to cpp file
2020-11-05 Paul BauerAllow pdb2gmx to handle cyclic molecules
2020-11-05 Berk HessDisable MTS with SD integrator
2020-11-04 Alan GrayAllow GPU update without GPU DD
2020-11-04 Joe JordanNBLIB listed forces API update
2020-10-28 Berk HessCorrect AWH initial histogram size
2020-10-27 M. Eric IrrgangUpdate image names in job definitions.
2020-10-26 Roland SchulzMake install-guide MPI consistent
2020-10-24 Paul BauerDisallow OpenMP on Windows in CI
2020-10-23 M. Eric IrrgangUpdate Docker image build scripts.
2020-10-22 Christian BlauChange outdated remdine references to gitlab
2020-10-21 Berk HessFix pull code bug with DD and atom sets
2020-10-21 Christian BlauClarify that mdtutorials are not provided by the gromac...
2020-10-20 Paul BauerMerge branch 'origin/release-2020' into merge-release...
2020-10-19 Paul BauerAdd release highlights
2020-10-19 Paul BauerRevert "Add muparser and CMake handling"
2020-10-19 Andrey AlekseenkoFix random doxygen warnings and typos
2020-10-14 Andrey AlekseenkoAdd static constexpr members to naming style guide
2020-10-13 Paul BauerFix missing copyright and release notes
2020-10-09 Berk HessAdd MTS support for pull and AWH
2020-10-09 Christian BlauRemove dysfunctional QMMM interface pt5
2020-10-09 Paul BauerRemove under the hood editing of pdb files
2020-10-08 M. Eric IrrgangClarify the GMX_BUILD_MDRUN_ONLY full testing instructions.
2020-10-07 Paul BauerFix download location for regressiontests
2020-10-07 Paul BauerMerge branch 'origin/release-2020' into merge-release...
2020-10-06 Paul BauerPrepare for GROMACS 2020.5
2020-10-06 Paul BauerGROMACS version 2020.4
2020-10-05 Paul BauerFix debug message location
2020-10-05 Paul BauerAdd muparser and CMake handling
2020-10-05 Berk HessRemove incorrect cycle suppression
2020-10-02 Paul BauerWork-around for RDRAND returning -1 on Ryzen
2020-10-01 Szilárd PállUpdate mdrun-performance.rst
2020-10-01 Gilles Gouaillardetdocs: add ARM+SVE support to the release notes and...
2020-10-01 Pascal MerzUpdate modular simulator docs
2020-09-30 Berk HessMove computeSlowForces into stepWork
2020-09-30 Paul BauerUpdate CI on 2020 branch
2020-09-30 Andrey AlekseenkoFix Doxygen formula generation
2020-09-30 Paul BauerRevert "Add new GROMACS logo and use it in the manual."
2020-09-30 Pascal MerzFix bug resetting mdatoms masses to lambda=0 state
2020-09-30 Paul BauerAdd new GROMACS logo and use it in the manual.
2020-09-29 Paul BauerAdd post submit rules to CI
2020-09-29 M. Eric IrrgangInterface updates allowing client to provide MPI commun...
2020-09-28 Berk HessFix dispersion correction table generation
2020-09-28 Joe JordanAdd initial nblib public API
2020-09-28 Giovanni BussiFixed incorrect enum
2020-09-25 Berk HessFix grompp group handling with frozen system
2020-09-22 Andrey AlekseenkoDraft: Fix compilation
2020-09-21 Artem ZhmurovMove the message to the deprEcation-policy file
2020-09-17 Gilles Gouaillardethardware: only check RDTSCP on x86 platforms
2020-09-17 Artem ZhmurovRemove the CPU hardware context from the general list...
2020-09-17 David van der SpoelAdd release notes
2020-09-16 Christian BlauExtend user docs on affine transformations for densities
2020-09-15 Christian BlauAll coordinates in the density-guided-simulation group...
2020-09-15 Paul BauerFix missing include for MSVC build
2020-09-13 Berk HessDecouple nsttcouple and nstpcouple from nstlist
2020-09-11 Paul BauerForce use of Python3 in Doxygen CMakeFiles
2020-09-10 Gilles Gouaillardetfix check_assign_interactions_atom()
2020-09-08 Christian BlauAllow density-guided simulations to translate structure
2020-09-08 Paul BauerMove densityfitting to its own directory
2020-09-04 Pascal MerzIntroduce CheckpointData
2020-09-03 Szilárd PállMove mixplaced release notes entry
2020-09-03 Alan GrayFix bug in Lincs GPU setup
2020-08-31 Paul BauerMerge branch 'release-2020' into master
2020-08-28 Berk HessAdd SIMD version of harmonic bonds
2020-08-26 Mark AbrahamPermit build with CUDA 11.0
2020-08-20 Magnus LundborgMake it possible to use FEP lambda states as a reaction...
2020-08-17 Mark AbrahamSupport oneAPI in gitlab CI
2020-08-08 Mark AbrahamFix typo in docs
2020-08-07 Christian BlauFixed the mis-fix
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