BioD PNPI Git Repos - alexxy/gromacs.git/search

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2021-10-27	Szilárd Páll	Unify coordinate copy handling across GPU platforms	commit \| commitdiff \| tree
2021-09-29	Szilárd Páll	Allow disabling cj prefetch in the CUDA nbnxm kernels	commit \| commitdiff \| tree
2021-09-27	Szilárd Páll	Fix stepWork.useGpuXHalo on search steps	commit \| commitdiff \| tree
2021-09-23	Szilárd Páll	Fix incorrect event dependency of GPU update	commit \| commitdiff \| tree
2021-08-19	Szilárd Páll	Avoid using cr->duty in setupStepWorkload	commit \| commitdiff \| tree
2021-08-19	Szilárd Páll	Use workload flags more in do_md()	commit \| commitdiff \| tree
2021-08-19	Szilárd Páll	Add separate PME rank SimluationWorkload flags	commit \| commitdiff \| tree
2021-08-19	Szilárd Páll	Clarify StepWorkload doxygen	commit \| commitdiff \| tree
2021-08-18	Szilárd Páll	Add PP decomposition simluationWorkload flags	commit \| commitdiff \| tree
2021-07-30	Szilárd Páll	Only define GMX_SYCL_DPCPP macro in SYLC builds	commit \| commitdiff \| tree
2021-06-08	Szilárd Páll	Work around hipSYCL buffer reinterpret error	commit \| commitdiff \| tree
2021-06-04	Szilárd Páll	Require CUDA 11.0	commit \| commitdiff \| tree
2021-06-04	Szilárd Páll	Move useMts flag from forcerec to simulationWorkload	commit \| commitdiff \| tree
2021-06-03	Szilárd Páll	Fix getLocalAtomCount()	commit \| commitdiff \| tree
2021-06-03	Szilárd Páll	Add domainWorkload flags for CPU local force contributions	commit \| commitdiff \| tree
2021-06-03	Szilárd Páll	Add a getter function for the local atom count	commit \| commitdiff \| tree
2021-05-26	Szilárd Páll	Eliminate redundant GPU force reduction event dependency	commit \| commitdiff \| tree
2021-05-26	Szilárd Páll	Implement generic j-reduction in the nbnxm SYCL kernels	commit \| commitdiff \| tree
2021-05-21	Szilárd Páll	Workaround for a hipSYCL assertion error	commit \| commitdiff \| tree
2021-05-11	Szilárd Páll	Remove GMX_FORCE_DO_NOT_NEED_NORMAL_FORCE legacy flag...	commit \| commitdiff \| tree
2021-05-11	Szilárd Páll	Eliminate duplicate CPU->GPU copy of x	commit \| commitdiff \| tree
2021-05-10	Szilárd Páll	Move PME-GPU do_force() local bool into stepWorkload	commit \| commitdiff \| tree
2021-05-03	Szilárd Páll	Mention the users forums on the user-guide front page	commit \| commitdiff \| tree
2021-05-03	Szilárd Páll	Allow using CPU PME with DD and GPU update	commit \| commitdiff \| tree
2021-04-22	Szilárd Páll	Fix doxygen of the SYCL atomicFetchAdd	commit \| commitdiff \| tree
2021-04-21	Szilárd Páll	Remove isnormal() check around the atomic increment	commit \| commitdiff \| tree
2021-04-21	Szilárd Páll	Fix nbnxm hipSYCL kernels 64-wide exec on AMD	commit \| commitdiff \| tree
2021-04-12	Szilárd Páll	Workaround for compilation with hipSYCL 0.9.1	commit \| commitdiff \| tree
2021-03-26	Szilárd Páll	Allow setting nbnxm cluster size for SYCL	commit \| commitdiff \| tree
2021-03-23	Szilárd Páll	Fix deviceIdsAssigned() to return a unique list of IDs	commit \| commitdiff \| tree
2021-03-22	Szilárd Páll	Remove a misplaced update cycle closing	commit \| commitdiff \| tree
2021-03-21	Szilárd Páll	Rename sendFToPpCudaDirect	commit \| commitdiff \| tree
2021-03-14	Szilárd Páll	Use existing PME f ready event in PmeForceSenderGpu	commit \| commitdiff \| tree
2021-03-13	Szilárd Páll	Rename launchReceiveCoordinatesFromPpCudaDirect	commit \| commitdiff \| tree
2021-03-11	Szilárd Páll	Simplify gmx_pme_send_force_vir_ener()	commit \| commitdiff \| tree
2021-03-05	Szilárd Páll	Clarify the SYCL subgroup size on different targets	commit \| commitdiff \| tree
2021-03-04	Szilárd Páll	Simplify LJ parameter lookup	commit \| commitdiff \| tree
2021-02-18	Szilárd Páll	Clean up box vector constants in do_force	commit \| commitdiff \| tree
2021-02-16	Szilárd Páll	Support checking event status in GpuEventSynchronizer	commit \| commitdiff \| tree
2021-02-07	Szilárd Páll	Fix clang-tidy 11 warning in nbnxm ocl kernels	commit \| commitdiff \| tree
2021-02-02	Szilárd Páll	Improve DLB recommendation	commit \| commitdiff \| tree
2021-01-29	Szilárd Páll	Improve CUDA codegen flags	commit \| commitdiff \| tree
2021-01-26	Szilárd Páll	Change default Ewald kernel to tabulated on NVIDIA...	commit \| commitdiff \| tree
2021-01-22	Szilárd Páll	Disable CUDA textures also on NVIDIA Ampere A100	commit \| commitdiff \| tree
2021-01-21	Szilárd Páll	Minor naming fix in OpenCL nbnxm kernels	commit \| commitdiff \| tree
2021-01-19	Szilárd Páll	Disable CUDA textures on NVIDIA Volta	commit \| commitdiff \| tree
2021-01-19	Szilárd Páll	Add G. Gouaillardet to the list of contributors	commit \| commitdiff \| tree
2021-01-05	Szilárd Páll	Update src/regressiontests URLs to https	commit \| commitdiff \| tree
2020-12-31	Szilárd Páll	Bump version post-release to rc2	commit \| commitdiff \| tree
2020-12-30	Szilárd Páll	GROMACS 2021-rc1 release candidate	commit \| commitdiff \| tree
2020-11-11	Szilárd Páll	Fix gcc 9 "warning: ‘unused’ attribute ignored"	commit \| commitdiff \| tree
2020-11-10	Szilárd Páll	GPU codepath cycle counting fixes	commit \| commitdiff \| tree
2020-11-09	Szilárd Páll	Fix cycle counting in StatePropagatorDataGpu	commit \| commitdiff \| tree
2020-11-03	Szilárd Páll	Add missing wallcycle_stop	commit \| commitdiff \| tree
2020-10-30	Szilárd Páll	Clang format	commit \| commitdiff \| tree
2020-10-30	Szilárd Páll	Add fvec doxygen	commit \| commitdiff \| tree
2020-10-30	Szilárd Páll	Fix AMD OpenCL float3 array optimization bug	commit \| commitdiff \| tree
2020-10-27	Szilárd Páll	Fix clang-tidy v10 warnigns in OpenCL kernels	commit \| commitdiff \| tree
2020-10-24	Szilárd Páll	Exclude CUDA 10.2 as well from C++17 compilation	commit \| commitdiff \| tree
2020-10-22	Szilárd Páll	Add missing GPU force reduction cycle counting	commit \| commitdiff \| tree
2020-10-21	Szilárd Páll	Add missing cycle counting for GPU halo exchange calls	commit \| commitdiff \| tree
2020-10-20	Szilárd Páll	Allow gcc-9 on Power 9	commit \| commitdiff \| tree
2020-10-09	Szilárd Páll	Fix NBLIB CMake error message	commit \| commitdiff \| tree
2020-10-01	Szilárd Páll	Update mdrun-performance.rst	commit \| commitdiff \| tree
2020-09-24	Szilárd Páll	Improve OpenCL log/error reporting	commit \| commitdiff \| tree
2020-09-03	Szilárd Páll	Move mixplaced release notes entry	commit \| commitdiff \| tree
2020-04-12	Szilárd Páll	Fix clang 10 -Wimplicit-int-float-conversion warnings	commit \| commitdiff \| tree
2020-03-19	Szilárd Páll	Fix DLB initial state reporting	commit \| commitdiff \| tree
2020-03-11	Szilárd Páll	Reorganize dipole calculation in do_force	commit \| commitdiff \| tree
2020-02-26	Szilárd Páll	Avoid mdrun terminate due to GPU sanity check errors	commit \| commitdiff \| tree
2020-02-26	Szilárd Páll	Document NVIDIA OpenCL broken on Volta and Turing	commit \| commitdiff \| tree
2020-02-26	Szilárd Páll	Remove outdated PME-GPU limitation in user guide	commit \| commitdiff \| tree
2020-02-25	Szilárd Páll	Improve GPU update tasks assignment consistency	commit \| commitdiff \| tree
2020-02-17	Szilárd Páll	Add simulation workload flag for dipole computation	commit \| commitdiff \| tree
2020-02-15	Szilárd Páll	Fix gpuudpate and gpucomm matrix docs	commit \| commitdiff \| tree
2020-02-11	Szilárd Páll	Fix incorrect GPU update task assignment fallback	commit \| commitdiff \| tree
2020-02-10	Szilárd Páll	Avoid dev flags in triggering gpuupdate nightly matrix	commit \| commitdiff \| tree
2020-02-10	Szilárd Páll	Avoid (re)initializing GPU update without DD	commit \| commitdiff \| tree
2020-02-06	Szilárd Páll	Remove mu_tot from compute_globals()	commit \| commitdiff \| tree
2020-01-31	Szilárd Páll	Eliminate the legacyFlags manipulation in do_force()	commit \| commitdiff \| tree
2020-01-31	Szilárd Páll	Remove BufferOpsUseGpu enum	commit \| commitdiff \| tree
2020-01-29	Szilárd Páll	Small improvement in OpenCL error handling	commit \| commitdiff \| tree
2020-01-24	Szilárd Páll	Add target for offline PME OpenCL compilation	commit \| commitdiff \| tree
2020-01-24	Szilárd Páll	Fix deadlock in PP-PME balancing startup delay	commit \| commitdiff \| tree
2020-01-19	Szilárd Páll	Template X buffer ops on setFillerCoords	commit \| commitdiff \| tree
2020-01-16	Szilárd Páll	Fix PME run mode without PME	commit \| commitdiff \| tree
2020-01-10	Szilárd Páll	Improve mdrun performance user guide	commit \| commitdiff \| tree
2019-12-20	Szilárd Páll	Enable buffer ops when GMX_GPU_DD_COMMS is set	commit \| commitdiff \| tree
2019-12-19	Szilárd Páll	PP-PME load balancing improvements	commit \| commitdiff \| tree
2019-12-18	Szilárd Páll	Allow x D2H to overlap with GPU force compute	commit \| commitdiff \| tree
2019-12-17	Szilárd Páll	Comment the use of waitCoordinatesCopiedToDevice	commit \| commitdiff \| tree
2019-12-17	Szilárd Páll	Add wallcycle counting to StatePropagatorDataGpu	commit \| commitdiff \| tree
2019-12-16	Szilárd Páll	Fix the GPU bonded stream with 1 PP + 1 PME rank	commit \| commitdiff \| tree
2019-12-12	Szilárd Páll	Allow overlapping CPU force H2D with compute	commit \| commitdiff \| tree
2019-11-17	Szilárd Páll	Trigger ocl_nbnxm_kernels target with clang-tidy	commit \| commitdiff \| tree
2019-11-17	Szilárd Páll	Fix clang-tidy 8 warnings in OpenCL nbnxm kernels	commit \| commitdiff \| tree
2019-11-03	Szilárd Páll	Improve SimulationWorkload doxygen	commit \| commitdiff \| tree
2019-11-01	Szilárd Páll	Rename reference checksum generating target	commit \| commitdiff \| tree
2019-11-01	Szilárd Páll	Use "-" in checksum-related version suffix	commit \| commitdiff \| tree
2019-11-01	Szilárd Páll	Improve workload data structures' docs	commit \| commitdiff \| tree
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