Add preprocessing and integration test for transformation coordinate
[alexxy/gromacs.git] / src / gromacs / gmxpreprocess / readpull.cpp
2021-10-27 Oliver FleetwoodAdd preprocessing and integration test for transformati...
2021-10-18 Andrey AlekseenkoMerge release-2021 into master
2021-10-04 Berk HessImprove transformation coordinate expression checks
2021-09-14 Andrey AlekseenkoMerge remote-tracking branch 'origin/release-2021'...
2021-09-03 Paul BauerAdd support for transformation pull coordinates
2021-08-19 Andrey AlekseenkoMerge remote-tracking branch 'origin/release-2021'...
2021-06-29 Paul BauerMerge branch release-2021 into master
2021-06-03 Berk HessMinor pull code cleanup
2021-05-07 Paul BauerMerge branch release-2021 into merge-2021-into-master
2021-05-04 Andrey AlekseenkoFix GCC-11 warning
2021-04-21 Joe Jordanclang-tidy-11 fixes for gmxpreprocess
2021-03-31 Berk HessUse EnumerationArray for pull isAngleType
2021-03-30 Berk HessAdd coordIndex to t_pull_coord
2021-03-25 Joe JordanUse ArrayRef in signatures of constraints and some...
2021-03-22 Kevin BoydClean up leaks in t_inputrec
2021-03-19 Paul BauerBulk change to const ref for mtop
2021-03-19 ejjordanUse const refs in atoms2md signature
2021-03-05 Paul BauerMerge branch release-2020 into merge-2020-into-2021
2021-02-22 Paul BauerRefactor md_enums
2021-02-12 Mark AbrahamMerge branch release-2021 into master
2021-01-29 Mark AbrahamMerge branch release-2021
2021-01-07 Paul BauerMerge branch release-2020 into merge-2020-into-2021
2020-12-18 Mark AbrahamMerge branch release-2021
2020-12-16 M. Eric IrrgangApply re-formatting to C++ in src/ tree.
2020-11-24 Paul BauerMerge branch 'origin/release-2020' into merge-2020...
2020-11-05 Paul BauerMerge branch 'origin/release-2021' into merge-2021...
2020-11-05 Magnus LundborgSet pbcatom_input in order to pass later checks
2020-10-20 Paul BauerMerge branch 'origin/release-2020' into merge-release...
2020-10-13 Joe JordanFix segfault in pull reading
2020-10-07 Paul BauerMerge branch 'origin/release-2020' into merge-release...
2020-08-31 Paul BauerMerge branch 'release-2020' into master
2020-07-03 Joe JordanUse vector in atoms2md instead of pointer
2020-05-24 Kevin BoydClean up grompp memory leaks in rotation and pull struc...
2020-05-23 Artem ZhmurovRemove dependence on t_mdatoms from pull code
2020-05-06 Paul BauerMerge branch 'origin/release-2020' into master
2020-03-04 Paul BauerMerge branch release-2020 into master
2020-02-28 Paul BauerMerge branch release-2019 into release-2020
2020-02-23 ejjordanUse more forward declarations to removed header depende...
2020-01-28 Paul BauerMerge branch origin/release-2020 into master
2020-01-09 Artem ZhmurovMake PBC type enumeration into PbcType enum class
2020-01-09 Mark AbrahamSplit lines with many copyright years
2020-01-08 Roland SchulzMerge release-2019 into release-2020
2019-12-27 Paul BauerMerge origin/release-2019 into release-2020
2019-11-29 Mark AbrahamMerge branch release-2019 into release-2020
2019-11-20 Paul BauerMerge 'origin/release-2019' into release-2020
2019-11-07 Paul BauerApply clang-format to source tree
2019-10-29 Paul BauerMerge branch 'release-2019' into master
2019-09-25 Szilárd PállMerge remote-tracking branch 'origin/release-2019'
2019-09-24 Paul BauerMerge branch release-2019 into master
2019-08-22 Mark AbrahamMerge branch release-2019
2019-08-01 Paul BauerMerge release-2019 into master
2019-06-14 Paul BauerMerge branch release-2018 into release-2019
2019-04-02 Paul BauerAdd std::string case insensitive compare
2019-03-07 Mark AbrahamEliminate mdlib/mdrun.h
2019-03-06 Mark AbrahamRevert "Eliminate mdlib/mdrun.h"
2019-03-06 Mark AbrahamEliminate mdlib/mdrun.h
2019-03-02 Mark AbrahamMerge branch release-2019
2019-02-20 Paul BauerMerge branch 'release-2019' into master
2019-02-04 Roland SchulzRename all source files from - to _ for consistency.
2019-01-30 Mark AbrahamMerge remote branch release-2018 into release-2019
2019-01-23 Roland SchulzMerge release-2018 into release-2019
2018-12-31 Paul BauerMerge branch release-2018 into release-2019
2018-12-17 Paul BauerMerge branch release-2018 into release-2019
2018-11-21 Paul BauerMerge branch release-2018 into release-2019
2018-10-26 Mark AbrahamMerge branch release-2018 into release-2019
2018-10-15 Magnus LundborgEnable output of average pull force and positions.
2018-10-03 Magnus LundborgAllow using COM of previous step as PBC reference
2018-10-01 Mark AbrahamFix gcc-8 warnings about strings
2018-09-25 Magnus LundborgAdd margin as input to pullGroupObeysPbcRestrictions
2018-08-29 Mark AbrahamMerge branch release-2018
2018-08-24 Berk HessMerge "Merge branch release-2018"
2018-08-24 Mark AbrahamMerge branch release-2018
2018-08-18 Berk HessAdd check for pull group PBC to grompp
2018-08-18 Roland Schulzreadability-implicit-bool-conversion 2/2
2018-08-18 Roland Schulzclang-tidy modernize
2018-07-18 Berk HessApply local atom sets in pull code
2018-07-04 Roland SchulzMerge release-2018 into master
2018-06-07 Paul BauerChange use of t_inpfile to std::vector
2018-06-07 Paul BauerRemove macros in input file reading
2018-05-03 Mark AbrahamMerge branch release-2018
2018-04-13 Mark AbrahamMerge branch release-2018
2018-04-03 Mark AbrahamMerge "Merge branch release-2018"
2018-03-29 Berk HessMove file opening out of init_pull()
2018-03-20 Mark AbrahamMerge branch release-2016 into release-2018
2018-02-16 Mark AbrahamMerge branch release-2016 into release-2018
2018-02-14 Mark AbrahamMerge branch release-2016 into release-2018
2018-02-08 Mark AbrahamMerge branch release-2016 into release-2018
2018-01-09 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-22 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-21 Mark AbrahamMerge branch release-5-1 into release-2016
2017-12-20 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-12 Mark AbrahamMerge branch release-2016 into release-2018
2017-12-04 Mark AbrahamMerge branch release-2016 into release-2018
2017-11-19 Viveca LindahlAdd AWH biasing module + tests
2017-11-17 Mark AbrahamUse HostAllocationPolicy for chargeA
2017-11-09 Mark AbrahamPrepared t_mdatoms for using vector
2017-11-02 Mark AbrahamMerge branch release-2016
2017-10-20 Mark AbrahamMerge branch release-2016
2017-10-16 Mark AbrahamMerge branch release-2016
2017-10-06 Berk HessAdd SIMD intrinsics version of simple update
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