Merge release-5-0 into master

Change-Id: I44d8158c68dd1804b8456c096b86f52a979c0261

diff --combined cmake/gmxCFlags.cmake
index f6056c376cab071f0e9c3f900b59fa4111e4f16e,0ccbc001ff4ea200c0ec184174f85703ce3763f6..1e675f72f706353d58fd6eb7cf7901bc1f67e283
--- 1/cmake/gmxCFlags.cmake
--- 2/cmake/gmxCFlags.cmake
+++ b/cmake/gmxCFlags.cmake
@@@ -64,7 -64,7 +64,7 @@@ function(gmx_set_cmake_compiler_flags
          # be set up elsewhere and passed to this function, but it is
          # inconvenient in CMake to pass more than one list, and such a
          # list is only used here.
 -        foreach(build_type RELWITHDEBUGINFO RELWITHASSERT MINSIZEREL)
 +        foreach(build_type RELWITHDEBUGINFO RELWITHASSERT MINSIZEREL PROFILE)
              set(GMXC_${language}FLAGS_${build_type} "${GMXC_${language}FLAGS_RELEASE}")
          endforeach()
          # Copy the flags that are only used by the real Release build
@@@ -110,12 -110,14 +110,12 @@@ MACRO(gmx_c_flags
          # Since 4.8 on by default. For previous version disabling is a no-op. Only disabling for Release because with assert
          # the warnings are OK.
          GMX_TEST_CFLAG(CFLAGS_WARN_REL "-Wno-array-bounds" GMXC_CFLAGS_RELEASE_ONLY)
 -        # Since gcc 4.8 strict - false postives with old gmx_fatal. TODO: Remove in master
 -        GMX_TEST_CFLAG(CFLAGS_WARN_UNINIT "-Wno-maybe-uninitialized" GMXC_CFLAGS)
          if(CYGWIN)
              GMX_TEST_CFLAG(CFLAGS_WARN_SUBSCRIPT "-Wno-char-subscripts" GMXC_CFLAGS)
          endif()
          # new in gcc 4.5
          GMX_TEST_CFLAG(CFLAGS_EXCESS_PREC "-fexcess-precision=fast" GMXC_CFLAGS_RELEASE)
 -        GMX_TEST_CFLAG(CFLAGS_COPT "-fomit-frame-pointer -funroll-all-loops"
 +        GMX_TEST_CFLAG(CFLAGS_COPT "-funroll-all-loops"
                         GMXC_CFLAGS_RELEASE)
          GMX_TEST_CFLAG(CFLAGS_NOINLINE "-fno-inline" GMXC_CFLAGS_DEBUG)
      endif()
@@@ -131,7 -133,7 +131,7 @@@
          GMX_TEST_CFLAG(CXXFLAGS_WARN_REL "-Wno-array-bounds" GMXC_CXXFLAGS_RELEASE_ONLY)
          # new in gcc 4.5
          GMX_TEST_CXXFLAG(CXXFLAGS_EXCESS_PREC "-fexcess-precision=fast" GMXC_CXXFLAGS_RELEASE)
 -        GMX_TEST_CXXFLAG(CXXFLAGS_COPT "-fomit-frame-pointer -funroll-all-loops"
 +        GMX_TEST_CXXFLAG(CXXFLAGS_COPT "-funroll-all-loops"
                           GMXC_CXXFLAGS_RELEASE)
          GMX_TEST_CXXFLAG(CXXFLAGS_NOINLINE "-fno-inline" GMXC_CXXFLAGS_DEBUG)
      endif()
@@@ -171,11 -173,11 +171,11 @@@
  #2557: comparison between signed and unsigned operands
  #3280: declaration hides member ".."
  #3346: dynamic exception specifications are deprecated
-             GMX_TEST_CFLAG(CFLAGS_WARN "-w3 -wd111 -wd177 -wd181 -wd193 -wd271 -wd304 -wd383 -wd424 -wd444 -wd522 -wd593 -wd869 -wd981 -wd1418 -wd1419 -wd1572 -wd1599 -wd2259 -wd2415 -wd2547 -wd2557 -wd3280 -wd3346" GMXC_CFLAGS)
+ #11074: Inlining inhibited by limit max-size(/max-total-size)
+ #11076: To get full report use -opt-report=3 -opt-report-phase ipo (shown for previous remark)
+             GMX_TEST_CFLAG(CFLAGS_WARN "-w3 -wd111 -wd177 -wd181 -wd193 -wd271 -wd304 -wd383 -wd424 -wd444 -wd522 -wd593 -wd869 -wd981 -wd1418 -wd1419 -wd1572 -wd1599 -wd2259 -wd2415 -wd2547 -wd2557 -wd3280 -wd3346 -wd11074 -wd11076" GMXC_CFLAGS)
              GMX_TEST_CFLAG(CFLAGS_STDGNU "-std=gnu99" GMXC_CFLAGS)
              GMX_TEST_CFLAG(CFLAGS_OPT "-ip -funroll-all-loops -alias-const -ansi-alias" GMXC_CFLAGS_RELEASE)
-             #documented to be default but not set for ICC15. Gives remarks that inlining is not possible because of max-size setting
-             GMX_TEST_CFLAG(CFLAGS_INLINE "-no-inline-max-size -no-inline-max-total-size" GMXC_CFLAGS)
          else()
              if(NOT GMX_OPENMP)
                  if(CMAKE_C_COMPILER_VERSION VERSION_GREATER 13.99.99)
@@@ -201,9 -203,8 +201,8 @@@
  #All but the following warnings are identical for the C-compiler (see above)
  #1782: #pragma once is obsolete
  #2282: unrecognized GCC pragma
-             GMX_TEST_CXXFLAG(CXXFLAGS_WARN "-w3 -wd111 -wd177 -wd181 -wd193 -wd271 -wd304 -wd383 -wd424 -wd444 -wd522 -wd593 -wd869 -wd981 -wd1418 -wd1419 -wd1572 -wd1599 -wd2259 -wd2415 -wd2547 -wd2557 -wd3280 -wd3346 -wd1782 -wd2282" GMXC_CXXFLAGS)
+             GMX_TEST_CXXFLAG(CXXFLAGS_WARN "-w3 -wd111 -wd177 -wd181 -wd193 -wd271 -wd304 -wd383 -wd424 -wd444 -wd522 -wd593 -wd869 -wd981 -wd1418 -wd1419 -wd1572 -wd1599 -wd2259 -wd2415 -wd2547 -wd2557 -wd3280 -wd3346 -wd11074 -wd11076 -wd1782 -wd2282" GMXC_CXXFLAGS)
              GMX_TEST_CXXFLAG(CXXFLAGS_OPT "-ip -funroll-all-loops -alias-const -ansi-alias" GMXC_CXXFLAGS_RELEASE)
-             GMX_TEST_CXXFLAG(CXXFLAGS_INLINE "-no-inline-max-size -no-inline-max-total-size" GMXC_CXXFLAGS)
          else()
              if(NOT GMX_OPENMP)
                  if(CMAKE_CXX_COMPILER_VERSION VERSION_GREATER 13.99.99)