alexxy/gromacs.git
2020-08-04 Erik LindahlSimplified uniform GPU selection in CMake
2020-08-04 Alan GrayFix compilation issue: pass variable of expected type...
2020-08-03 M. Eric IrrgangPrevent failed commandline_operation from publishing...
2020-08-03 M. Eric IrrgangMinor additions to gmxapi install.rst
2020-08-03 M. Eric IrrgangUse importlib_resources in Python 3.6 images.
2020-07-31 M. Eric IrrgangNormalize docker image names.
2020-07-31 M. Eric IrrgangFix some minor typesetting issues.
2020-07-31 M. Eric IrrgangImprove install docs links.
2020-07-31 Mark AbrahamMove code to prepare for multisim class
2020-07-31 Mark AbrahamRelease configs were using a wrong build type
2020-07-31 Berk HessMove foreign potential energy accumulation
2020-07-30 M. Eric IrrgangMove sources for libgmxapi.
2020-07-30 M. Eric IrrgangRemove disabled test for superseded feature.
2020-07-30 M. Eric IrrgangIgnore a generated file.
2020-07-29 M. Eric IrrgangUse GMXAPI CMake option guard for gmxapi target declara...
2020-07-29 Kevin BoydFix undefined behavior flagged by UBSAN
2020-07-29 Artem ZhmurovRevert c++-17 features that are not supported by CUDA...
2020-07-29 Artem ZhmurovRevert c++-17 features that are not supported by CUDA...
2020-07-27 Mark AbrahamFix warnings in release builds
2020-07-27 Artem ZhmurovFix clang-tidy warning
2020-07-27 Mark AbrahamFix RDTSCP handling
2020-07-24 Simon ChristAssertion string and typo fix
2020-07-20 Magnus LundborgTwo sets of coefficients for Coulomb FEP PME on GPU
2020-07-18 Pascal MerzFollow up to "Separate StatePropagatorData element...
2020-07-17 Pascal MerzIntroduce modular simulator exceptions
2020-07-15 M. Eric IrrgangBegin moving installed interface to `api/`
2020-07-15 Pascal MerzSeparate Element from FreeEnergyPerturbationData
2020-07-15 Mark AbrahamDivide default communicator from DD communicators
2020-07-15 Artem ZhmurovFix the suspicious string literal error in GPU status...
2020-07-14 Pascal MerzSeparate energy data and element
2020-07-11 Christoph Junghanscmake: export cxx standard
2020-07-10 M. Eric IrrgangFix libgromacs CMake target install syntax.
2020-07-09 Pascal MerzDivide default communicator from DD communicators
2020-07-08 Mark AbrahamFix issues found with clang-tidy
2020-07-08 Kevin BoydUse signed arithmetic in enumeration helper
2020-07-08 Kevin BoydEnforce unsigned type in flags.
2020-07-08 Pascal MerzSeparate StatePropagatorData element
2020-07-07 Christian BlauMove finalising routine into mtop
2020-07-07 Paul BauerMove densityfitting to its own directory
2020-07-07 Kevin BoydFix unsigned integer overflow bug in spline tables
2020-07-07 Kevin BoydAdd stricter ASAN checks
2020-07-07 Pascal MerzAnnotate modular simulator headers with exposure level
2020-07-07 Artem ZhmurovMake cl_nbparam into a struct
2020-07-06 Berk HessMove foreign potential energy accumulation
2020-07-06 Roland SchulzModernize STL usage
2020-07-06 Kevin BoydAvoid overflow in RNG
2020-07-05 Gaurav GargFix cycle counters for "comm.coord" and "Wait + Comm...
2020-07-03 Joe JordanUse vector in atoms2md instead of pointer
2020-07-03 Pascal MerzSeparate ModularSimulator and ModularSimulatorAlgorithm
2020-07-02 Christian BlauCoordinate transformation on single RVecs
2020-07-01 Roland SchulzSimplify Iterators
2020-07-01 Paul BauerRevert "Make everything run on Gitlab infrastructure."
2020-07-01 Christian BlauUpdated the change management documentation
2020-07-01 M. Eric IrrgangClean up simulatorbuilder.h
2020-07-01 Paul BauerDisable failing builds for master branch
2020-06-29 Paul BauerMake everything run on Gitlab infrastructure.
2020-06-27 M. Eric IrrgangAdd missing ABI header.
2020-06-26 ejjordanIncrease BD ulp tolerance to avoid spurious test failures
2020-06-26 Roland SchulzChange ArrayRef to use a proper iterator
2020-06-26 Paul BauerMinor cleanup in gmx bar
2020-06-26 M. Eric IrrgangImplement SimulatorBuilder.add() for BoxDeformationHandle.
2020-06-26 M. Eric IrrgangUse TopologyData.
2020-06-26 M. Eric IrrgangUse IonSwapping parameter.
2020-06-26 M. Eric IrrgangUse CenterOfMassPulling
2020-06-26 M. Eric IrrgangUse ReplicaExchange member instead of build() argument.
2020-06-26 M. Eric IrrgangUse SimulatorModules parameter.
2020-06-26 M. Eric IrrgangUse InteractiveMD SimulatorBuilder parameter.
2020-06-26 M. Eric IrrgangUse LegacyInput.
2020-06-26 M. Eric IrrgangUse ConstraintsParam.
2020-06-26 M. Eric IrrgangMove Profiling parameter out of simulatorbuilder.build()
2020-06-26 M. Eric IrrgangUse SimulatorEnv
2020-06-26 M. Eric IrrgangImplement remaining SimulatorBuilder.add() methods.
2020-06-26 M. Eric IrrgangInterface for remaining SimulatorBuilder.add() methods.
2020-06-26 ejjordanCompletely encapsulate membed logic in MembedHolder
2020-06-26 Artem ZhmurovMake holder for simulation configuration
2020-06-26 Prashanth KanduriUse SimulatorStateData.
2020-06-26 ejjordanAdd MembedHolder for SimulatorBuilder.
2020-06-26 M. Eric IrrgangSimulatorBuilder.add() for StopHandlerBuilder.
2020-06-26 M. Eric IrrgangImplement SimulatorBuilder.build()
2020-06-26 Roland SchulzMKL NULL->nullptr and remove dead code
2020-06-26 Berk HessMove dispersion correction call to do_force()
2020-06-25 Mark AbrahamRestored the comment
2020-06-25 Artem ZhmurovMake cl_nbparam into a struct
2020-06-24 Paul BauerFix warning about needing config.h
2020-06-24 Berk HessAdd class ListedForces
2020-06-24 Berk HessChange grompp disres cost to linear
2020-06-24 Roland SchulzFix OpenCL install
2020-06-24 Artem ZhmurovFix minor nit-picks
2020-06-24 Roland SchulzFix clFFT build without GMX_LOAD_PLUGINS
2020-06-23 Roland SchulzDon't print pygments error
2020-06-23 Pascal MerzRefactor simulator comparison tests
2020-06-23 Mark AbrahamWIP: Finish removing compile_cpp_as_cuda
2020-06-23 Joe JordanRemove some headers from install targets
2020-06-23 Berk HessAdd virtual site with one constructing atom
2020-06-23 Kevin Boyd[WIP] Run regression tests under ASAN
2020-06-22 Artem ZhmurovRemove DeviceStream include from GPU traits
2020-06-22 M. Eric IrrgangReformat pairs.cpp
2020-06-22 M. Eric IrrgangUse Gromacs::gmx target to hint gmxapi tests.
2020-06-22 Berk HessMove soft-core parameters to interaction_const_t
2020-06-19 M. Eric IrrgangRemove workaround for gcc bug 58265.
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