alexxy/gromacs.git
2020-10-07 Mark AbrahamUpdate to oneAPI beta09
2020-10-07 M. Eric IrrgangImprove gmxPythonDiscovery.cmake
2020-10-07 Andrey AlekseenkoMake LeapFrogGpu less tied to CUDA
2020-10-07 Paul BauerFix download location for regressiontests
2020-10-07 Andrey Alekseenkomdlib/tests/leapfrog: Make GPU tests more platform...
2020-10-07 Paul BauerFix SYCL compilation
2020-10-07 Paul BauerMerge branch 'origin/release-2020' into merge-release...
2020-10-06 Artem ZhmurovRemove unused canComputeOnGpu(...) function from device...
2020-10-06 Paul BauerSet proper deviceVendor with SYCL
2020-10-06 Artem ZhmurovSimplify GPU usage decision function signatures
2020-10-06 Paul BauerPrepare for GROMACS 2020.5
2020-10-06 Paul BauerGROMACS version 2020.4
2020-10-06 Andrey AlekseenkoFix logic in init_ewald_coulomb_force_table
2020-10-06 Artem ZhmurovUse new GPU infrastructure in MDLib tests
2020-10-05 Paul BauerAlways set DeviceVendor
2020-10-05 Paul BauerFix debug message location
2020-10-05 Paul BauerAdd muparser and CMake handling
2020-10-05 Berk HessRemove incorrect cycle suppression
2020-10-05 Paul BauerFix doxygen warnings
2020-10-05 M. Eric IrrgangDon't override user provided CMAKE_OSX_DEPLOYMENT_TARGET.
2020-10-05 Pascal MerzFix ForceBuffers compiler warning
2020-10-02 Mark AbrahamCleaned up CUDA compilation
2020-10-02 Paul BauerWork-around for RDRAND returning -1 on Ryzen
2020-10-02 M. Eric IrrgangHandle gmxapi tmpi parameters better.
2020-10-02 M. Eric IrrgangLet gmxapi installation record the GROMACS library...
2020-10-02 Paul BauerRemove anonymous namespace in ARM SVE header
2020-10-02 Joe JordanAdd tests for setStringEntry
2020-10-02 Mark AbrahamUpdate GoogleTest to v1.8.1
2020-10-02 Christian BlauFix FEP lambda interpolation for reruns
2020-10-02 Alan GrayUse workload data structures for GPU halo exchange...
2020-10-02 Gilles Gouaillardetarm_sve: fix decr3Hsimd()
2020-10-01 Szilárd PállUpdate mdrun-performance.rst
2020-10-01 Gilles Gouaillardetdocs: add ARM+SVE support to the release notes and...
2020-10-01 Gilles Gouaillardethardware: detect ARM SVE architecture at runtime
2020-10-01 Gilles Gouaillardetcmake: use simd support for ARM+SVE
2020-10-01 Gilles Gouaillardetsimd: add support for aarch64+sve (ARM_SVE)
2020-10-01 Gilles Gouaillardetsimd: revamp the (templated) decr3Hsimd() subroutine
2020-10-01 Andrey AlekseenkoRemove ensureReferenceCount from OpenCL's GpuEventSynch...
2020-10-01 M. Eric IrrgangUse updated images for Python CI jobs.
2020-10-01 Artem ZhmurovAdd missing include into the tests comparison helper
2020-10-01 Paul BauerBreak up MPI tests
2020-10-01 Paul BauerFix post merge acceptance pipeline for release-2020
2020-10-01 Berk HessMove computeSlowForces into stepWork
2020-10-01 Christian BlauFix the FEP lambda interpolation
2020-10-01 Andrey AlekseenkoDevice management: Add SYCL DeviceBuffer
2020-10-01 Pascal MerzUpdate modular simulator docs
2020-09-30 Joe JordanAdd nblib sample script
2020-09-30 Pascal MerzRegression-test-style Google tests for FEP
2020-09-30 M. Eric IrrgangRestrict gmxapi pytest tests to `-nt 2`
2020-09-30 Andrey AlekseenkoSquash SYCL DeviceContext and DeviceStream
2020-09-30 Berk HessMove computeSlowForces into stepWork
2020-09-30 Paul BauerUpdate CI on 2020 branch
2020-09-30 M. Eric IrrgangSpecify OMP_NUM_THREADS for Pyhon CI scripts.
2020-09-30 Mark AbrahamFix warnings issued by clang with nvcc
2020-09-30 Andrey AlekseenkoFix Doxygen formula generation
2020-09-30 Paul BauerRevert "Add new GROMACS logo and use it in the manual."
2020-09-30 Pascal MerzFix bug resetting mdatoms masses to lambda=0 state
2020-09-30 Pascal MerzFix #3655
2020-09-30 Pascal MerzFix #3694
2020-09-30 Paul BauerAdd new GROMACS logo and use it in the manual.
2020-09-30 Artem ZhmurovRestore destructor for GpuTest and gmx_hw_info_t
2020-09-29 Pascal MerzFix bug resetting mdatoms masses to lambda=0 state
2020-09-29 Paul BauerFix doxygen warnings
2020-09-29 Artem ZhmurovDon't use fah_fsync
2020-09-29 ejjordanFail gracefully when nblib cannot be built
2020-09-29 Artem ZhmurovRemove two-stage initialization in DeviceStream
2020-09-29 Joe JordanAdd nblib backend: Part 2 of 2
2020-09-29 Paul BauerAdd post submit rules to CI
2020-09-29 Alan GrayRedevelopment of GPU Force Reduction/Buffer Ops
2020-09-29 M. Eric IrrgangClarifications for ResourceAssignment interface.
2020-09-29 M. Eric IrrgangSupport ResourceAssignment interface for tMPI library...
2020-09-29 M. Eric IrrgangAllow MPI-enabled clients to provide the library commun...
2020-09-29 M. Eric IrrgangUse MpiContextManager to provide MPI communicator.
2020-09-29 M. Eric IrrgangRelocate MpiContextManager.
2020-09-29 M. Eric IrrgangInterface updates allowing client to provide MPI commun...
2020-09-28 Alan GrayRemove single-dimension limitation from GPU halo exchange
2020-09-28 Joe JordanAdd nblib backend: Part 1 of 2
2020-09-28 Paul BauerChange download for regressiontest away from gerrit
2020-09-28 Andrey AlekseenkoFix error in ensureReferenceCount
2020-09-28 Mark AbrahamFix check for BitScanReverse64
2020-09-28 Berk HessFix dispersion correction table generation
2020-09-28 Joe JordanAdd initial nblib public API
2020-09-28 Giovanni BussiFixed incorrect enum
2020-09-28 Artem Zhmurovadd detection of CPX 5300 w/ 2FMAs
2020-09-27 Pascal MerzCompare trajectories to reference data
2020-09-27 Pascal MerzRoll back "Ensure the modular simulator runs only when...
2020-09-25 Andrey AlekseenkoFix #3668
2020-09-25 Pascal MerzReplace FramesToCompare enum by MaxNumFrames
2020-09-25 Mark AbrahamEnsure the modular simulator runs only when it should
2020-09-25 Paul BauerFix bad logic in regressiontest branch selection
2020-09-25 Berk HessFix grompp group handling with frozen system
2020-09-24 Paul BauerAllow deployment of nightly webpage to server
2020-09-24 Szilárd PállImprove OpenCL log/error reporting
2020-09-23 Andrey AlekseenkoFix false-positives in checkDeviceBuffer for OpenCL
2020-09-23 Mark AbrahamReport name of missing OpenCL kernels
2020-09-23 Pascal MerzAccess write checkpoint functionality directly
2020-09-23 Pascal MerzImplement Berendsen thermostat for modular simulator
2020-09-23 Mark AbrahamPermit comparison of only first frames
2020-09-23 Alan GrayAdd regression tests for gpucomm paths
2020-09-22 Mark AbrahamSplit mdrun-test
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