alexxy/gromacs.git
2014-03-18 Mark AbrahamRevert "Added new amber99sb-ildn-bsc0 force field."
2014-03-18 Christian WennbergRenaming in PME-routines
2014-03-18 Christian WennbergBugfix in LJ-PME without electrostatics
2014-03-18 Mark AbrahamRemoved more stuff related to gmx.ff and gmx2.ff
2014-03-18 Teemu MurtolaRemove interactive help from core selection parser
2014-03-18 Teemu MurtolaImprove interactive selection input
2014-03-17 Rossen ApostolovCleaned up endif/else-s in CMakeLists.txt and *.cmake...
2014-03-17 Mark AbrahamMerge "Merge branch release-4-6"
2014-03-17 Mark AbrahamMerge branch release-4-6
2014-03-17 Mark AbrahamFix perturbation to Verlet scheme when not perturbing
2014-03-17 Teemu MurtolaUpdate manual analysis section
2014-03-16 Erik LindahlUse a constant instead of sizeof(int) for SSE2 immediat...
2014-03-14 Carsten KutznerAvoid cross product with zero vector in rotational...
2014-03-14 Carsten KutznerThe van der Waals radius must equal the Coulomb radius...
2014-03-11 Christoph JunghansInstall enums.h
2014-03-11 Mark AbrahamFix MKL linking
2014-03-11 Mark AbrahamAvoid array-bounds warnings with gcc 4.8.2
2014-03-11 Rossen ApostolovRemoved .itp files from top level directory.
2014-03-11 Roland SchulzSimplify gmxTestLibXml2
2014-03-11 Berk HessPME load balancing now works with LJ-PME
2014-03-11 Teemu MurtolaFix misc. Doxygen issues
2014-03-11 Roland SchulzDon't disable MSVC warnings in config.h
2014-03-11 Roland SchulzFix CheckCXXCompilerFlag
2014-03-11 Szilárd PállBump required CUDA version to 4.0
2014-03-11 Roland SchulzReplace inline with gmx_inline
2014-03-10 Mark AbrahamFix dependency on swapcoords enums
2014-03-08 Teemu MurtolaRemove some unnecessary declarations
2014-03-06 Roland SchulzRemove KERNEL_WIDTH
2014-03-06 Rossen ApostolovRemoved the deprecated gmx.ff and gmx2.ff.
2014-03-06 Mark AbrahamFix formatting in install guide
2014-03-06 Mark AbrahamFix CMake syntax error
2014-03-06 Roland SchulzUse gmx_int64_t for gmx_off_t
2014-03-06 Berk HessFixed exit with FEP with PME nodes without LJ-PME
2014-03-06 ngogaMartini CG - Combined angle-torsion potentials
2014-03-06 David van der... Six new quotes from classic literature.
2014-03-05 Roland SchulzAdd RelWithAssert build type
2014-03-05 Roland SchulzRemove dependency on TNG in trxio.h
2014-03-05 Roland SchulzReport MIC SIMD correctly
2014-03-05 Mark AbrahamMerge "Merge release-4-6 into master"
2014-03-05 Berk HessBuffer estimate now works with rvd-switch=0
2014-03-05 Roland SchulzCheck zlib can actually be linked
2014-03-05 Roland SchulzAvoid segfault when comparing tpr
2014-03-04 Mark AbrahamAdd enum and docs for using tpx_version
2014-03-03 Roland SchulzMerge release-4-6 into master
2014-03-03 Mark AbrahamFix calling SIMD group kernels
2014-03-02 Teemu MurtolaFix incorrect grid cell size in g_sas -nopbc
2014-03-01 Teemu MurtolaMove default library path search to program context
2014-03-01 Mark AbrahamAdd fatal error for Andersen+constraints+DD
2014-03-01 Christoph Junghansswitch ld_seed from int to gmx_int64_t
2014-03-01 Szilard PallAdded CUDA LJ-PME nbnxn kernels
2014-03-01 Magnus LundborgBumped TNG to latest version.
2014-02-28 Szilard PallImproved CUDA non-bonded kernel performance
2014-02-28 Teemu MurtolaResidual SIMD Doxygen improvements
2014-02-28 Teemu MurtolaMisc. Doxygen configuration changes
2014-02-28 Teemu MurtolaConvert gmx-sas to the C++ framework
2014-02-28 Teemu MurtolaAdd support for non-uniform X axis in array data
2014-02-27 Teemu MurtolaImprove support for data sets in C++ tools
2014-02-27 Szilard PallCUDA kernels for switched LJ
2014-02-27 Teemu MurtolaImprove floating point comparisons in unit tests
2014-02-26 Roland SchulzRemove Cygwin+MingW from installguide
2014-02-26 Berk HessFree-energy now works with the Verlet scheme
2014-02-26 Alexey ShvetsovFix -Wmaybe-uninitialized warnings in some files
2014-02-26 Teemu MurtolaMisc. Doxygen build system improvements
2014-02-26 Erik LindahlAdded message to warn that group kernels are deprecated.
2014-02-26 Michael ShirtsUpdating and improving Andersen thermostat documentation
2014-02-26 Roland SchulzICC aliasing optimization flags
2014-02-26 Roland SchulzUse reduce in pme
2014-02-26 Erik LindahlRedesigned SIMD module and unit tests.
2014-02-26 Roland SchulzReplace all mdrun rngs with cycle based rng
2014-02-26 Teemu MurtolaFix GMX_PRIu32 and GMX_PRIu64 for MSVC
2014-02-26 Mark AbrahamAdd ThreadSanitizer build type
2014-02-25 Berk HessFixes seperate PME nodes without LJ-PME
2014-02-25 Mark AbrahamKeep compilers happy on BG/Q
2014-02-24 Mark AbrahamClean up options for domain decomposition
2014-02-24 Berk HessImplemented LJ-PME nbnxn kernels
2014-02-24 Berk HessFixed bug with LJ pot-switch in 4xN kernels
2014-02-24 Mark AbrahamPermit warning-free use of Andersen thermostat
2014-02-24 Mark AbrahamSuppress icc warning for Boost 1.55 use of #pragma...
2014-02-23 Rossen ApostolovRemoved deprecated Encad FF.
2014-02-21 Roland SchulzFix load_lj_pair_params2 for MIC
2014-02-21 Roland SchulzUpdated Boost to latest 1.55.0
2014-02-21 Roland SchulzMerge "Merge release-4-6 into master"
2014-02-21 Nina FischerAdded new amber99sb-ildn-bsc0 force field.
2014-02-21 Szilard Pallportability aspects in install guide + minor tweaks
2014-02-21 Roland SchulzMerge release-4-6 into master
2014-02-21 Mark AbrahamReinstate shell code with DD
2014-02-20 Mark AbrahamRemove particle decomposition
2014-02-20 Christoph Junghansadded gmx_is_{single,double}_precision
2014-02-20 Roland SchulzFix aligned store to unaligned memory
2014-02-20 Mark Abrahamavoid mdrun crash when rdtscp is not supported
2014-02-20 Mark AbrahamAdd integration tests for replica exchange
2014-02-20 Rossen ApostolovRename ffopen and ffclose to gmx_ff*.
2014-02-20 Roland SchulzFix Reference Build
2014-02-20 Teemu MurtolaAdd documentation for using Doxygen
2014-02-19 Berk HessImplemented nbnxn LJ switch functions
2014-02-19 Mark AbrahamMake some variable names less cryptic
2014-02-18 Mark AbrahamFix outstanding references to "CPU acceleration"
2014-02-18 Mark AbrahamFix harmless bug with combination of group and twin...
2014-02-18 Mark AbrahamExtend TestFileManager
2014-02-17 Roland SchulzEnable more warnings
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