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Suppress remaining errors from copyright script
2014-01-01 Teemu MurtolaSuppress remaining errors from copyright script
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2014-01-01 Teemu MurtolaFix remaining copyright headers
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2014-01-01 Teemu MurtolaMore copyright header updates
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2014-01-01 Teemu MurtolaRemove obsolete large file support info
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2013-12-30 Teemu MurtolaMore robust shell detection in GMXRC
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2013-12-30 Teemu MurtolaInitialize default index groups for C++ tools
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2013-12-29 Teemu MurtolaMinor vec.h cleanup
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2013-12-29 Teemu MurtolaFix pkgconfig flags with internal Boost
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2013-12-29 Teemu MurtolaReset SOVERSION for libgromacs
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2013-12-28 Teemu MurtolaChange use of compiler flags with GPU + C++11
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2013-12-28 Teemu MurtolaMove bin/lib suffix management into separate file.
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2013-12-24 Teemu MurtolaMove shell completion things into a separate file
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2013-12-24 Teemu MurtolaGet rid of set_default_file_name()
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2013-12-21 Teemu MurtolaMove parse_common_args() into commandline/pargs.*
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2013-12-21 Teemu MurtolaMove pargs.cpp into src/gromacs/commandline/
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2013-12-20 Teemu MurtolaMove Program() and ShortProgram() into copyrite.h
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2013-12-20 Teemu MurtolaClean up trajectory time control
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2013-12-18 Teemu MurtolaClean up old command line parsing
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2013-12-08 Teemu MurtolaDon't create symlinks in the build tree
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2013-12-04 Teemu MurtolaFix test build with GMX_BUILD_MDRUN_ONLY
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2013-12-02 Teemu MurtolaRemove remaining uses of programs.txt
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2013-12-02 Teemu MurtolaUniform behavior for 'make man' and 'make html'
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2013-12-02 Teemu MurtolaFix [CHEVRON]/[chevron] for HTML output
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2013-12-01 Teemu MurtolaRemove GMX_DOUBLE from config.h
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2013-12-01 Teemu MurtolaDon't install headers depending on GMX_INTERNAL_XDR
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2013-12-01 Teemu MurtolaDocument how to add C++ tools
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2013-12-01 Teemu MurtolaAdjust more copyright headers
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2013-11-29 Teemu MurtolaRemove unused config.h defines
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2013-11-29 Teemu MurtolaRemove obsolete FindGit.cmake
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2013-11-29 Teemu MurtolaMake help texts refer to gmx-something
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2013-11-28 Teemu MurtolaMove gmx_omp.* into src/gromacs/utility/
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2013-11-28 Teemu MurtolaGenerate gromacs.7 from the wrapper binary
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2013-11-28 Teemu MurtolaFix some #include problems.
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2013-11-28 Teemu MurtolaUniform headers in HTML pages
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2013-11-27 Teemu MurtolaRemove unused gmx_membed.c
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2013-11-26 Teemu MurtolaRemove #ifdef GMX_THREAD_MPI for basic thread safety.
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2013-11-20 Teemu MurtolaUpdate copyright headers in kernels.
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2013-11-20 Teemu MurtolaUpdate copyright headers in generated kernels.
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2013-11-20 Teemu MurtolaScript to automatically update copyright
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2013-11-19 Teemu MurtolaAdd some missing copyright headers.
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2013-11-19 Teemu MurtolaAdd back mechanism for cross-tool hyperlinks.
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2013-11-17 Teemu MurtolaReformat existing LGPL copyright notices.
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2013-11-17 Teemu MurtolaMove binary directory search to ProgramInfo.
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2013-11-17 Teemu MurtolaRemove more obsolete content from share/html.
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2013-11-17 Teemu MurtolaAllow copying of HelpWriterContext.
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2013-11-16 Teemu MurtolaAdd listing of programs by topic to HTML output.
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2013-11-16 Teemu MurtolaSome module dependency cleanup.
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2013-11-16 Teemu MurtolaReorganize help writing code.
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2013-11-16 Teemu MurtolaMake gmx-gangle more flexible with multiple angles
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2013-11-16 Teemu MurtolaTurn on most -Wunused warnings for C++ code.
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2013-11-15 Teemu MurtolaConsistently handle NULL at argv[argc].
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2013-11-15 Teemu MurtolaSimplify GMX_X11 handling.
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2013-11-12 Teemu MurtolaUpgrade Doxygen layout to 1.8.5.
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2013-10-31 Teemu MurtolaMove more timing routines into timing/.
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2013-10-30 Teemu MurtolaMarkup substitution through HelpWriterContext.
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2013-10-28 Teemu MurtolaOverview Doxygen pages for analysis framework.
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2013-10-28 Teemu MurtolaSome overview content for Doxygen documentation.
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2013-10-28 Teemu MurtolaMisc. Doxygen updates for src/gromacs/utility/.
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2013-10-28 Teemu MurtolaSimplify code structure for C++ analysis tools
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2013-10-20 Teemu MurtolaRemove useless warnings from Doxygen logs.
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2013-10-18 Teemu MurtolaUpgrade layout file to support Doxygen >=1.8.
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2013-10-16 Teemu MurtolaRemove latex help export.
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2013-10-15 Teemu MurtolaFix/improve installation directory logic.
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2013-10-07 Teemu MurtolaImprove markup substitution in HelpWriterContext.
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2013-10-07 Teemu MurtolaHTML export from the wrapper binary.
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2013-10-04 Teemu MurtolaClean up CTest usage.
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2013-10-04 Teemu MurtolaReorganize static/shared library management.
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2013-10-03 Teemu MurtolaCMake helper for tracking cache variable changes.
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2013-10-03 Teemu MurtolaRemove unused shift_util.c.
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2013-10-03 Teemu MurtolaImprove diagnostics with empty selections.
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2013-10-03 Teemu MurtolaMan page export from the wrapper binary.
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2013-10-03 Teemu MurtolaUse filenm.c data for FileNameOption.
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2013-10-03 Teemu MurtolaFix warnings with Doxygen 1.8.5.
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2013-09-29 Teemu MurtolaRemove obsolete efHAT and src/ngmx/dlgtest.
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2013-09-28 Teemu MurtolaUse git version info in Doxygen.
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2013-09-26 Teemu MurtolaMerge "Merge branch release-4-6"
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2013-09-26 Teemu Murtolathread_mpi: Clean up -Wunused-parameter warnings.
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2013-09-26 Teemu MurtolaCMake helper for dependent cache variables.
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2013-09-24 Teemu MurtolaRemove old generated HTML files.
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2013-09-24 Teemu MurtolaRemove src/contrib/prfn.c and related code.
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2013-09-23 Teemu MurtolaMerge "Merge branch 'release-4-6'"
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2013-09-23 Teemu MurtolaRemove obsolete tools.
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2013-09-21 Teemu MurtolaCMake helper for multichoice options.
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2013-09-20 Teemu MurtolaCMake cleanup.
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2013-09-20 Teemu MurtolaMerge branch 'release-4-6'
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2013-09-19 Teemu MurtolaMake uncrustify.sh more verbose on errors.
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2013-09-19 Teemu MurtolaUniform code path for writing out console help.
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2013-09-19 Teemu MurtolaFramework for help export from wrapper binary.
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2013-09-13 Teemu MurtolaAdd option to build a standalone mdrun binary only.
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2013-09-13 Teemu MurtolaMove mdrun into the wrapper binary.
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2013-09-13 Teemu MurtolaMake parse_common_args() not exit.
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2013-09-13 Teemu MurtolaRemove unused -man output formats.
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2013-09-09 Teemu MurtolaMake gmx_ana_pos_t a C++ class.
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2013-09-09 Teemu MurtolaAdd some legends to C++ tool output.
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2013-09-08 Teemu MurtolaRemove duplicate .nr members from selection structs.
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2013-09-08 Teemu MurtolaRemove gmx_ana_indexmap_t::bMapStatic.
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2013-09-08 Teemu MurtolaMove gmx_ana_pos_t::g into gmx_ana_indexmap_t.
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2013-09-06 Teemu MurtolaSupport for parallel data modules.
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2013-09-05 Teemu MurtolaAbstractAnalysisData module handling into a separate...
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2013-09-01 Teemu MurtolaMerge "Merge branch release-4-6 into master"
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