Fixes recently introduced bug in gmx analyze.
[alexxy/gromacs.git] / src /
2014-11-28 David van der SpoelFixes recently introduced bug in gmx analyze.
2014-11-27 Mark AbrahamConvert remaining callers of do_force to C++
2014-11-27 Teemu MurtolaClean up gmx solvate
2014-11-27 Teemu MurtolaPort gmx-solvate tests to use CommandLineTestBase
2014-11-27 Mark AbrahamMerge "Merge release-5-0 into master"
2014-11-27 Teemu MurtolaMore control over file backups
2014-11-27 Teemu MurtolaFurther insert-molecules cleanup
2014-11-26 Christoph JunghansMerge release-5-0 into master
2014-11-26 Teemu MurtolaConvert surface area calculation to C++
2014-11-26 Teemu MurtolaAdd some unit tests for surface area calculation
2014-11-26 Mark AbrahamFix trjconv modifying fr.time unnecessarily
2014-11-26 Roland SchulzMerge release-5-0 into master
2014-11-26 Mark AbrahamMove code to domdec module folder
2014-11-25 Berk HessFixed twin-range + freeze + constraints
2014-11-24 Berk HessAvoid NaN in rlist buffer calculation
2014-11-24 Magnus LundborgWhen writing TNG the input must contain molecule data.
2014-11-23 Roland SchulzSet GMX_SIMD to MIC for Xeon Phi
2014-11-17 Szilárd PállAllow increasing CUDA thread block size
2014-11-14 Teemu MurtolaRefactor position-evaluated selection keyword handling
2014-11-14 Szilárd PállStart nvprof profiling at counter reset
2014-11-12 Roland SchulzUse stat to check that paths are equivalent
2014-11-12 Berk HessCorrected parameter for sorting on search grid
2014-11-12 Berk HessFix DD bonded interaction range print
2014-11-12 Roland SchulzAdd bitmask type
2014-11-12 Carsten KutznerUpdated some .mdp file variables to use "-" instead...
2014-11-05 Roland SchulzMinor update of boost README
2014-10-30 Teemu MurtolaAdd more selection unit tests
2014-10-30 Teemu MurtolaFix more memory leaks in default group creation
2014-10-30 Teemu MurtolaFix memory leak in default index group creation
2014-10-30 Roland SchulzMerge "Merge release-5-0 into master"
2014-10-29 Teemu MurtolaMerge release-5-0 into master
2014-10-29 Teemu MurtolaImprove analysis nbsearch grid mapping
2014-10-28 Teemu MurtolaAvoid common.h inclusion in CUDA code
2014-10-26 Roland SchulzAdd Windows support for host-/username
2014-10-23 Teemu MurtolaMove truncate() wrapper to futil.h
2014-10-23 Teemu MurtolaEncapsulate use of nice()
2014-10-22 Teemu MurtolaCollect more platform-specific code to sysinfo.h
2014-10-22 Teemu MurtolaRename common.h to classhelpers.h
2014-10-22 Teemu MurtolaMove basic macros from common.h to basedefinitions.h
2014-10-22 Roland SchulzRemove Catamount cmake
2014-10-21 Roland SchulzFix C++11 flags for MingW
2014-10-20 Roland SchulzCreate scoped_cptr to replace scoped_ptr_sfree
2014-10-20 Roland SchulzUsed IWYU to partially clean up some includes
2014-10-20 Berk HessRemoved f_novirsum reduction in Verlet scheme
2014-10-20 Carsten KutznerFix order of ED/swap blocks during checkpoint reading.
2014-10-17 Mark AbrahamExtend gmock to turn off socket listener
2014-10-17 Mark AbrahamMove code to what will become the ewald module
2014-10-15 Mark AbrahamConverted many integrator-loop files to C++
2014-10-14 David van der SpoelReorganizing analysis of correlation functions.
2014-10-14 Teemu MurtolaUse analysis nbsearch in insert-molecules
2014-10-13 Mark AbrahamMerge release-4-6 into release-5-0
2014-10-12 Roland SchulzFix misidentification of dot in path name
2014-10-11 Teemu MurtolaClean up gmx insert-molecules
2014-10-11 Teemu MurtolaMake 'gmx insert-molecules' tests test output
2014-10-11 Teemu MurtolaGeneralize command-line unit testing machinery
2014-10-09 Mark AbrahamFixed minor issue with NPT conserved energy
2014-10-09 Mark AbrahamClean up cshake() and resolve old issues
2014-10-07 Berk HessFixes issue with vsiten and Verlet buffers
2014-10-06 Mark AbrahamFix trjconv -split not closing files
2014-10-05 Roland SchulzAllow runAsMainSingleModule to be called more than...
2014-10-03 Mark AbrahamMove pair-interaction code into listed-forces module
2014-10-03 Teemu MurtolaMore robust handling for installed headers
2014-10-03 Mark AbrahamUnite code for handling listed pairs
2014-10-01 Mark AbrahamMerge release-5-0 into master
2014-10-01 Carsten KutznerAllow gmx tune_pme to skip the check for command-line...
2014-09-30 Erik LindahlAdd Power8 VSX SIMD support
2014-09-30 Szilard PallFix incorrect LJ cut-off with GPU + PME tuning
2014-09-30 Berk HessAvoid DLB with overloaded PME ranks
2014-09-30 Berk HessAdded GPU local wait to load balancing
2014-09-30 Erik LindahlAvoid using function calls in OpenMP directives
2014-09-29 Berk HessDomain decomposition now checks the rlist buffer
2014-09-29 Berk HessSIMD acceleration for RB dihedrals
2014-09-29 Mark AbrahamMerge "Merge release-4-6 into release-5-0" into release-5-0
2014-09-29 Berk HessAvoid PME tuning decreasing rcoulomb
2014-09-29 Roland SchulzMerge release-4-6 into release-5-0
2014-09-29 Berk HessFix calc_grid avoiding PME grid factor 84
2014-09-26 Rossen ApostolovConverted swap module to C++.
2014-09-26 Szilárd PállFix incorrect assertion statement
2014-09-23 Mark AbrahamRenamed bonded module as 'listed-forces'
2014-09-23 Mark AbrahamRefactor mdrun integration tests
2014-09-23 Roland SchulzFix ICC warnings
2014-09-23 David van der SpoelFixes potential bug in neighborsearching.
2014-09-23 Teemu MurtolaReorganize CPack management
2014-09-23 Teemu MurtolaGenerate man pages and completions by default if possible
2014-09-22 Teemu MurtolaMerge "Merge release-5-0 into master"
2014-09-22 Roland SchulzFix message about incorrect usage of dihedral type 9
2014-09-21 Roland SchulzMerge release-5-0 into master
2014-09-21 Teemu MurtolaSkip man/html/completion generation if not needed
2014-09-20 Teemu MurtolaFix patterns for .gitattributes
2014-09-20 Roland SchulzMinor performance improments
2014-09-19 Teemu MurtolaProper dependencies for Doxygen build rules
2014-09-19 Teemu MurtolaFix histogram resampling output bin positions
2014-09-19 Teemu MurtolaAdd support for cumulative histograms
2014-09-19 Teemu MurtolaMore precise analysisdata histogram accumulation
2014-09-18 Erik LindahlAdd Power/PowerPC VMX SIMD support
2014-09-18 Mark AbrahamMerge branch release-4-6 into release-5-0
2014-09-18 Roland SchulzFix double linkage for tests
2014-09-17 Roland SchulzFix shared libs for Mingw
2014-09-17 Roland SchulzMerge release-5-0 into master
2014-09-17 David van der SpoelMerge release-5-0 into master
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