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Add section on naming conventions to dev manual
[alexxy/gromacs.git] / src /
2015-04-23 Mark AbrahamFirst beta release of 5.1 tree | commitdiff
2015-04-22 Berk HessMerge branch 'release-5-0' tree | commitdiff
2015-04-21 Magnus LundborgTNG version 1.7.3 tree | commitdiff
2015-04-21 Mark AbrahamMerge "Merge branch release-5-0" tree | commitdiff
2015-04-17 Berk HessAdd value_ref and value to pull_coord_t tree | commitdiff
2015-04-17 Szilárd Pálldefine CUDA version and texobj support in config.h tree | commitdiff
2015-04-17 Mark AbrahamAdd comment about Andersen themostat and constraints tree | commitdiff
2015-04-17 Berk HessCorrect -ntmpi auto for intel nehalem and older tree | commitdiff
2015-04-17 David van der SpoelUpdated exponential fitting to make it robust. tree | commitdiff
2015-04-09 Mark AbrahamMerge branch release-5-0 tree | commitdiff
2015-04-09 David van der SpoelClarified comments for time-dependent electric fields. tree | commitdiff
2015-04-08 David van der SpoelFixed incorrect output of gb_algorith as sa_algorithm. tree | commitdiff
2015-04-08 Berk HessAdded pull geometry direction-relative tree | commitdiff
2015-04-08 Mark AbrahamUpdate mdrun Doxygen tree | commitdiff
2015-04-08 Mark AbrahamMade pme_work_t opaque tree | commitdiff
2015-04-01 Mark AbrahamInitialize n_tricvec field of t_pbc always tree | commitdiff
2015-03-19 Berk HessRemoved reduction of dH/dl without FE tree | commitdiff
2015-03-19 Mark AbrahamMade error message more generic tree | commitdiff
2015-03-19 Mark AbrahamExtend Force sub-counters tree | commitdiff
2015-03-13 Mark AbrahamMade GPU warning messages more user friendly tree | commitdiff
2015-03-12 Berk HessFixed mdrun fp exception with -debug tree | commitdiff
2015-03-11 Berk HessAdded update x copy-back to update timer tree | commitdiff
2015-03-11 Berk HessReduced cost of Berendsen pressure coupling tree | commitdiff
2015-03-06 Berk HessImprove threading of bondeds tree | commitdiff
2015-03-06 Mark AbrahamRestore wallcycle subcounter name to "Bonded F" tree | commitdiff
2015-03-05 Mark AbrahamFix Andersen thermostats tree | commitdiff
2015-03-05 Berk HessMade DD exclusion processing more efficient tree | commitdiff
2015-03-05 Berk HessSIMD acceleration for LINCS tree | commitdiff
2015-03-04 Berk HessAllow pull groups of 1 atom with mass 0 tree | commitdiff
2015-03-04 Berk HessCOM pulling options per coord, improved cylinder tree | commitdiff
2015-03-04 Roland SchulzFix GCC5 warnings tree | commitdiff
2015-03-03 Mark AbrahamRe-implement gmx tune_pme -cpi tree | commitdiff
2015-03-03 Erik LindahlAdded single-accuracy SIMD double math functions tree | commitdiff
2015-03-03 Roland Schulznbnxn utils performance improvement for Phi tree | commitdiff
2015-03-03 Berk HessFix div by zero in PP/PME ratio tree | commitdiff
2015-03-03 Mark AbrahamMove mdrun signalling code tree | commitdiff
2015-03-03 Mark AbrahamAdd test that plain multi-simulation works tree | commitdiff
2015-03-02 David van der SpoelUpdated documentation for electric fields. tree | commitdiff
2015-03-02 Berk HessAdded parentheses for casts in SIMD macros tree | commitdiff
2015-03-02 Roland SchulzDon't search installation prefix if binary is not found tree | commitdiff
2015-03-02 Mark AbrahamRun replica-exchange tests with MPI enabled tree | commitdiff
2015-03-02 Mark AbrahamAdd infrastructure for running MPI integration tests tree | commitdiff
2015-02-25 Roland SchulzC++ conversion for PME spread/gather tree | commitdiff
2015-02-25 Mark AbrahamAdd content to user guide tree | commitdiff
2015-02-25 Mark AbrahamSplit pme.c into multiple files tree | commitdiff
2015-02-24 Berk HessFixed parallel distribution and thread count reporting tree | commitdiff
2015-02-24 Erik LindahlAdded AVX-512ER SIMD support tree | commitdiff
2015-02-24 Erik LindahlAdd AVX-512F SIMD support tree | commitdiff
2015-02-18 Mark AbrahamReenable SIMD for R-B dihedrals tree | commitdiff
2015-02-14 Erik Marklundgmx hbond no longer removes PBC when none is present tree | commitdiff
2015-02-13 Mark AbrahamFix mdrun-only build tree | commitdiff
2015-02-13 Teemu MurtolaReplace more [BR] with rst bullet lists tree | commitdiff
2015-02-13 Teemu MurtolaReplace some [BR] in help texts with rst literals tree | commitdiff
2015-02-13 Teemu MurtolaMove flow chart from old-html to Sphinx tree | commitdiff
2015-02-13 Teemu MurtolaMake (most) HTML links to file formats work again tree | commitdiff
2015-02-13 Teemu MurtolaGenerate man pages through Sphinx tree | commitdiff
2015-02-13 Teemu MurtolaReplace tool HTML help with Sphinx-generated docs tree | commitdiff
2015-02-12 Roland SchulzMerge release-5-0 into master tree | commitdiff
2015-02-12 Roland SchulzMerge release-4-6 into release-5-0 tree | commitdiff
2015-02-12 Berk HessRe-fixed PME bug with high OpenMP thread count tree | commitdiff
2015-02-10 Roland SchulzWork-around for ICC 15 on Phi tree | commitdiff
2015-02-07 Teemu MurtolaSupport more complex fixed position selections tree | commitdiff
2015-02-06 Berk HessRe-enabled SIMD for angles and dihedrals tree | commitdiff
2015-02-04 Mark AbrahamImplement user guide tree | commitdiff
2015-02-04 Berk HessCorrect CUDA kernel energy flag tree | commitdiff
2015-02-02 Mark AbrahamMerge branch release-5-0 tree | commitdiff
2015-02-02 Mark AbrahamAvoid near-silent generation of zero energies tree | commitdiff
2015-02-02 Roland SchulzFix FP exception in FE tree | commitdiff
2015-02-02 Mark AbrahamFix use of simd.h tree | commitdiff
2015-01-29 Teemu MurtolaAdd input file options that accept missing files tree | commitdiff
2015-01-29 John BaxterRemoves some unnecessary ternary conditionals tree | commitdiff
2015-01-27 Roland SchulzWorkaround for MemorySanitizer tree | commitdiff
2015-01-27 Roland SchulzFix unitlized memory read in checkpoint tree | commitdiff
2015-01-24 Teemu MurtolaRemove old selection parser error handling code tree | commitdiff
2015-01-24 Teemu MurtolaImprove selection error messages (use exceptions) tree | commitdiff
2015-01-23 John BaxterCleans up steepest descent initial potential hack tree | commitdiff
2015-01-23 Mark AbrahamChange some listed-forces headers to be library-only tree | commitdiff
2015-01-22 John BaxterChanged "struct swap" to "struct t_swap" tree | commitdiff
2015-01-21 Berk HessCorrected RDTSCP warning text tree | commitdiff
2015-01-20 Teemu MurtolaMake data file path search more reusable tree | commitdiff
2015-01-20 Mark AbrahamRemoved gmx_header_config.h tree | commitdiff
2015-01-20 Teemu MurtolaConvert forcefield search to C++ tree | commitdiff
2015-01-19 Teemu MurtolaRemove AnalysisNeighborhood::setUseBoundingBox() tree | commitdiff
2015-01-17 Teemu MurtolaMerge "Merge branch release-5-0" tree | commitdiff
2015-01-16 Szilard PallImprove and clarify mdrun behavior with nsteps<0 tree | commitdiff
2015-01-15 Mark AbrahamMerge branch release-5-0 tree | commitdiff
2015-01-15 Berk HessFix allocation issue with VV integrator tree | commitdiff
2015-01-14 Mark AbrahamFix and suppress warnings on BlueGene/Q tree | commitdiff
2015-01-14 Mark AbrahamRefactor OpenMP initialization tree | commitdiff
2015-01-14 Mark AbrahamRemove temporary symlinks from pre-5.0 tool names tree | commitdiff
2015-01-09 Mark AbrahamRemove mdrun -testverlet tree | commitdiff
2015-01-08 Teemu MurtolaRefactor logic for finding share/top/ files tree | commitdiff
2015-01-08 Mark AbrahamHandle ivec* correctly in DD error message tree | commitdiff
2015-01-08 Mark AbrahamFix floating-point exception tree | commitdiff
2015-01-08 Teemu MurtolaClosed some .xvg files that were being left open tree | commitdiff
2015-01-07 Teemu MurtolaCustom program context for unit tests tree | commitdiff
2015-01-07 Teemu MurtolaSplit unit test init from testoptions.cpp tree | commitdiff
2015-01-06 Teemu MurtolaUse analysis nbsearch for surface area calculation tree | commitdiff
2015-01-06 Teemu MurtolaUse xvgrclose() for files opened with xvgropen() tree | commitdiff
2015-01-05 Teemu MurtolaSupport subset of rvec array as input for analysis... tree | commitdiff
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