BioD PNPI Git Repos - alexxy/gromacs.git/history - src/gromacs/gmxpreprocess/grompp.cpp

biod.pnpi.spb.ru / alexxy / gromacs.git / history

[alexxy/gromacs.git] / src / gromacs / gmxpreprocess / grompp.cpp

2018-09-17	Berk Hess	Change pointers to InteractionList to references	blob \| commitdiff \| raw
2018-09-14	Berk Hess	Change gmx_moltype_t.ilist to InteractionLists	blob \| commitdiff \| raw \| diff to current
2018-09-13	Berk Hess	Add C++ version of t_ilist	blob \| commitdiff \| raw \| diff to current
2018-09-10	Roland Schulz	Replace rounding using int(x+0.5) with roundToInt	blob \| commitdiff \| raw \| diff to current
2018-09-09	Paul Bauer	Remove macro for group type in topology	blob \| commitdiff \| raw \| diff to current
2018-09-07	Mark Abraham	Fix grompp memory leaks	blob \| commitdiff \| raw \| diff to current
2018-08-29	Mark Abraham	Merge branch release-2018	blob \| commitdiff \| raw \| diff to current
2018-08-24	Berk Hess	Merge "Merge branch release-2018"	blob \| commitdiff \| raw \| diff to current
2018-08-24	Mark Abraham	Merge branch release-2018	blob \| commitdiff \| raw \| diff to current
2018-08-18	Berk Hess	Add check for pull group PBC to grompp	blob \| commitdiff \| raw \| diff to current
2018-08-18	Roland Schulz	readability-implicit-bool-conversion 1/2	blob \| commitdiff \| raw \| diff to current
2018-08-18	Roland Schulz	clang-tidy modernize	blob \| commitdiff \| raw \| diff to current
2018-08-08	Roland Schulz	Fix part of old-style casting	blob \| commitdiff \| raw \| diff to current
2018-08-08	Roland Schulz	Remove gmx custom fixed int (e.g. gmx_int64_t) types	blob \| commitdiff \| raw \| diff to current
2018-07-17	Joe Jordan	change gmx_bool to bool in gmxpreprocess	blob \| commitdiff \| raw \| diff to current
2018-07-04	Roland Schulz	Merge release-2018 into master	blob \| commitdiff \| raw \| diff to current
2018-07-01	Roland Schulz	clang-tidy: readability-non-const-parameter (2/2)	blob \| commitdiff \| raw \| diff to current
2018-06-29	Roland Schulz	clang-tidy: misc-suspicious-missing-comma	blob \| commitdiff \| raw \| diff to current
2018-06-29	Roland Schulz	clang-tidy: add modernize nullptr & emplace	blob \| commitdiff \| raw \| diff to current
2018-06-06	Berk Hess	Clean up make_at2con	blob \| commitdiff \| raw \| diff to current
2018-06-05	Mark Abraham	Separate flexible constraint counting	blob \| commitdiff \| raw \| diff to current
2018-05-24	Berk Hess	Fix grompp bug with blocks of same molecules	blob \| commitdiff \| raw \| diff to current
2018-05-03	Mark Abraham	Merge branch release-2018	blob \| commitdiff \| raw \| diff to current
2018-04-16	Berk Hess	Move natoms_mol out of gmx_molblock_t	blob \| commitdiff \| raw \| diff to current
2018-04-13	Mark Abraham	Merge branch release-2018	blob \| commitdiff \| raw \| diff to current
2018-04-13	Mark Abraham	Clean up constraints code	blob \| commitdiff \| raw \| diff to current
2018-04-09	Berk Hess	Convert gmx_molblock_t to C++	blob \| commitdiff \| raw \| diff to current
2018-04-03	Berk Hess	Convert gmx_mtop_t to C++	blob \| commitdiff \| raw \| diff to current
2018-04-03	Mark Abraham	Merge "Merge branch release-2018"	blob \| commitdiff \| raw \| diff to current
2018-03-29	Berk Hess	Move file opening out of init_pull()	blob \| commitdiff \| raw \| diff to current
2018-03-28	Mark Abraham	Free more memory in grompp and mdrun	blob \| commitdiff \| raw \| diff to current
2018-03-28	Mark Abraham	Merge branch release-2018	blob \| commitdiff \| raw \| diff to current
2018-03-20	Mark Abraham	Merge branch release-2016 into release-2018	blob \| commitdiff \| raw \| diff to current
2018-03-06	Mark Abraham	Merge branch release-2018	blob \| commitdiff \| raw \| diff to current
2018-02-27	Aleksei Iupinov	Merge branch 'release-2018'	blob \| commitdiff \| raw \| diff to current
2018-02-16	Mark Abraham	Merge branch release-2016 into release-2018	blob \| commitdiff \| raw \| diff to current
2018-02-16	Mark Abraham	Merge branch release-2018 into master	blob \| commitdiff \| raw \| diff to current
2018-02-14	Mark Abraham	Merge branch release-2016 into release-2018	blob \| commitdiff \| raw \| diff to current
2018-02-09	Mark Abraham	Merge branch release-2018	blob \| commitdiff \| raw \| diff to current
2018-02-08	Mark Abraham	Merge branch release-2016 into release-2018	blob \| commitdiff \| raw \| diff to current
2018-02-08	Aleksei Iupinov	Merge branch 'release-2018' into master	blob \| commitdiff \| raw \| diff to current
2018-01-23	Mark Abraham	Remove support for implicit solvation	blob \| commitdiff \| raw \| diff to current
2018-01-09	Mark Abraham	Merge branch release-2016 into release-2018	blob \| commitdiff \| raw \| diff to current
2018-01-04	Mark Abraham	Merge branch release-2018	blob \| commitdiff \| raw \| diff to current
2018-01-02	Erik Lindahl	Document required position restraint files	blob \| commitdiff \| raw \| diff to current
2017-12-22	Mark Abraham	Merge branch release-2016 into release-2018	blob \| commitdiff \| raw \| diff to current
2017-12-21	Mark Abraham	Merge branch release-5-1 into release-2016	blob \| commitdiff \| raw \| diff to current
2017-12-20	Mark Abraham	Merge branch release-2016 into release-2018	blob \| commitdiff \| raw \| diff to current
2017-12-17	Roland Schulz	Merge branch release-2018	blob \| commitdiff \| raw \| diff to current
2017-12-14	Paul Bauer	Remove PBC before generating TPR with group scheme	blob \| commitdiff \| raw \| diff to current
2017-12-12	Mark Abraham	Merge branch release-2016 into release-2018	blob \| commitdiff \| raw \| diff to current
2017-12-11	Berk Hess	Add grompp note for PR pcouple + position restraints	blob \| commitdiff \| raw \| diff to current
2017-12-04	Mark Abraham	Merge branch release-2016 into release-2018	blob \| commitdiff \| raw \| diff to current
2017-11-19	Viveca Lindahl	Add AWH biasing module + tests	blob \| commitdiff \| raw \| diff to current
2017-11-16	Berk Hess	Also print 1x1 pair-list setup to log	blob \| commitdiff \| raw \| diff to current
2017-11-02	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-10-20	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-10-16	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-10-05	Szilárd Páll	Refactor scaled box handling for PME/Ewald	blob \| commitdiff \| raw \| diff to current
2017-09-17	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-09-12	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-09-12	Szilárd Páll	Merge branch 'release-2016'	blob \| commitdiff \| raw \| diff to current
2017-09-03	Mark Abraham	Merge branch release-5-1 into release-2016	blob \| commitdiff \| raw \| diff to current
2017-08-29	Roland Schulz	Enable missing declarations warning	blob \| commitdiff \| raw \| diff to current
2017-08-22	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-08-16	Berk Hess	Add dynamic pair-list pruning framework	blob \| commitdiff \| raw \| diff to current
2017-08-15	Mark Abraham	Merge branch release-5-1 into release-2016	blob \| commitdiff \| raw \| diff to current
2017-07-19	David van der Spoel	Removed unnecessary static declarations for command...	blob \| commitdiff \| raw \| diff to current
2017-06-28	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-06-27	Roland Schulz	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-05-29	Teemu Murtola	Remove pbcutil <-> mdtypes cyclic dependency	blob \| commitdiff \| raw \| diff to current
2017-05-09	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-05-09	Mark Abraham	Cleaned up memory usage in gmx traj and trjconv	blob \| commitdiff \| raw \| diff to current
2017-03-31	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-03-18	Gerrit Code Review	Merge "Merge branch release-2016"	blob \| commitdiff \| raw \| diff to current
2017-03-14	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-03-14	Berk Hess	Make grompp -r obligatory with posres	blob \| commitdiff \| raw \| diff to current
2017-03-13	Mark Abraham	Modernize read_inpfile	blob \| commitdiff \| raw \| diff to current
2017-03-13	Mark Abraham	Tests for grompp -f -po	blob \| commitdiff \| raw \| diff to current
2017-02-27	Teemu Murtola	Decouple t_inputrec from MDModules	blob \| commitdiff \| raw \| diff to current
2017-02-15	Mark Abraham	Merge branch release-5-1 into release-2016	blob \| commitdiff \| raw \| diff to current
2017-02-09	Mark Abraham	Improved state_change_natoms and used it more	blob \| commitdiff \| raw \| diff to current
2017-02-08	Gerrit Code Review	Merge "Merge branch release-2016"	blob \| commitdiff \| raw \| diff to current
2017-02-08	Mark Abraham	Give MDModules responsibility for option handling	blob \| commitdiff \| raw \| diff to current
2017-02-07	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-02-07	Berk Hess	Add mdp option check with decoupled modes	blob \| commitdiff \| raw \| diff to current
2017-02-05	Mark Abraham	Merge branch release-5-1 into release-2016	blob \| commitdiff \| raw \| diff to current
2017-02-02	David van der Spoel	Only print all dangling atoms with grompp -v	blob \| commitdiff \| raw \| diff to current
2017-01-31	Mark Abraham	Merge branch release-5-1 into release-2016	blob \| commitdiff \| raw \| diff to current
2017-01-23	Mark Abraham	Stopped header files including state.h	blob \| commitdiff \| raw \| diff to current
2017-01-21	Mark Abraham	Removed init_state	blob \| commitdiff \| raw \| diff to current
2017-01-19	Berk Hess	Fix PME order and grid size checks	blob \| commitdiff \| raw \| diff to current
2017-01-14	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2017-01-11	Roland Schulz	Tidy: modernize-use-nullptr	blob \| commitdiff \| raw \| diff to current
2017-01-03	Mark Abraham	Merge branch release-5-1 into release-2016	blob \| commitdiff \| raw \| diff to current
2016-12-20	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2016-12-12	Teemu Murtola	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2016-12-07	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2016-10-31	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
2016-10-31	Mark Abraham	Merge branch release-2016	blob \| commitdiff \| raw \| diff to current
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