BioD PNPI Git Repos - alexxy/gromacs.git/shortlog

biod.pnpi.spb.ru / alexxy / gromacs.git / shortlog

2015-06-17	Teemu Murtola	Improve logic for automatic selection names	commit \| commitdiff \| tree \| snapshot
2015-06-17	Berk Hess	Refactored pull data structures	commit \| commitdiff \| tree \| snapshot
2015-06-16	Mark Abraham	Stop people installing into the build tree	commit \| commitdiff \| tree \| snapshot
2015-06-16	Erik Lindahl	Fix CUDA version info in NVML application clock warning	commit \| commitdiff \| tree \| snapshot
2015-06-16	Erik Lindahl	Add membrane embedding docs	commit \| commitdiff \| tree \| snapshot
2015-06-16	Berk Hess	Added missing DD cycle counting	commit \| commitdiff \| tree \| snapshot
2015-06-16	Erik Lindahl	Updated FFTW recommendations in install-guide.	commit \| commitdiff \| tree \| snapshot
2015-06-16	Mark Abraham	Move code for managing mdrun -cpi and -append	commit \| commitdiff \| tree \| snapshot
2015-06-16	Alexey Shvetsov	Merge branch 'master' into pygromacs	commit \| commitdiff \| tree \| snapshot
2015-06-16	Berk Hess	Automated the -gpu_id option	commit \| commitdiff \| tree \| snapshot
2015-06-16	Erik Lindahl	Fix segfault with timer reset and -nb cpu	commit \| commitdiff \| tree \| snapshot
2015-06-16	Erik Lindahl	Avoid warning about affinity on Blue Gene, reduce warnings	commit \| commitdiff \| tree \| snapshot
2015-06-16	Mark Abraham	Fix pairs_nb not recognized as part of moleculetype	commit \| commitdiff \| tree \| snapshot
2015-06-16	Mark Abraham	Add unit tests for ArrayRef	commit \| commitdiff \| tree \| snapshot
2015-06-16	Roland Schulz	Fix warning in uncrustify	commit \| commitdiff \| tree \| snapshot
2015-06-16	Roland Schulz	Fix consts in bonded and clincs	commit \| commitdiff \| tree \| snapshot
2015-06-16	Teemu Murtola	Fix broken links from the old flow chart	commit \| commitdiff \| tree \| snapshot
2015-06-15	Erik Lindahl	Fix OS X FFTW build failures introduced 86a772	commit \| commitdiff \| tree \| snapshot
2015-06-15	Erik Lindahl	Fixed SIMD detection and flags common for IBM archs	commit \| commitdiff \| tree \| snapshot
2015-06-15	Rossen Apostolov	Building own fftw now uses version 3.3.4	commit \| commitdiff \| tree \| snapshot
2015-06-14	Berk Hess	Refactored mdrun resource division	commit \| commitdiff \| tree \| snapshot
2015-06-13	Berk Hess	Hardware reporting now covers all nodes	commit \| commitdiff \| tree \| snapshot
2015-06-12	Mark Abraham	Fix commandline test data	commit \| commitdiff \| tree \| snapshot
2015-06-12	Teemu Murtola	Update help output	commit \| commitdiff \| tree \| snapshot
2015-06-12	Magnus Lundborg	TNG version 1.7.6	commit \| commitdiff \| tree \| snapshot
2015-06-12	Teemu Murtola	Improve uncrustify Jenkins builds	commit \| commitdiff \| tree \| snapshot
2015-06-12	Teemu Murtola	Initial docs for Jenkins integration	commit \| commitdiff \| tree \| snapshot
2015-06-12	Teemu Murtola	Initial build system documentation in dev guide	commit \| commitdiff \| tree \| snapshot
2015-06-12	Teemu Murtola	Improve Jenkins docs build	commit \| commitdiff \| tree \| snapshot
2015-06-12	Teemu Murtola	Extend source layout description in dev guide	commit \| commitdiff \| tree \| snapshot
2015-06-11	Mark Abraham	Merge "Merge branch release-4-6 into release-5-0" into...	commit \| commitdiff \| tree \| snapshot
2015-06-11	Mark Abraham	Handle timing better in Jenkins	commit \| commitdiff \| tree \| snapshot
2015-06-11	Teemu Murtola	Script for Jenkins documentation build	commit \| commitdiff \| tree \| snapshot
2015-06-11	Mark Abraham	Clean up vsite interaction clean-up code	commit \| commitdiff \| tree \| snapshot
2015-06-09	Mark Abraham	Document limitations of trjconv -dump	commit \| commitdiff \| tree \| snapshot
2015-06-09	Teemu Murtola	Misc. improvements to docs build system	commit \| commitdiff \| tree \| snapshot
2015-06-09	Mark Abraham	Merge branch release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
2015-06-09	Teemu Murtola	Add description of relocatable binaries	commit \| commitdiff \| tree \| snapshot
2015-06-09	Teemu Murtola	Resolve one TODO for command line help tests	commit \| commitdiff \| tree \| snapshot
2015-06-09	Teemu Murtola	Improve user guide text for command line interface	commit \| commitdiff \| tree \| snapshot
2015-06-08	Szilard Pall	add last two GROMACS paper citations	commit \| commitdiff \| tree \| snapshot
2015-06-07	Erik Lindahl	Fix out-of-range integer literals for threefry	commit \| commitdiff \| tree \| snapshot
2015-06-06	Szilard Pall	Optimize atomic accumulation in CUDA NB kernel	commit \| commitdiff \| tree \| snapshot
2015-06-06	Roland Schulz	Use stat to check that paths are equivalent	commit \| commitdiff \| tree \| snapshot
2015-06-05	Alexey Shvetsov	Merge branch 'master' into pygromacs	commit \| commitdiff \| tree \| snapshot
2015-06-05	Roland Schulz	Merge release-5-0 into master	commit \| commitdiff \| tree \| snapshot
2015-06-05	Roland Schulz	Reenable lincs/bonded SIMD for ICC on Windows	commit \| commitdiff \| tree \| snapshot
2015-06-05	Mark Abraham	Remove gmx_simd_check_and_reset_overflow	commit \| commitdiff \| tree \| snapshot
2015-06-05	Berk Hess	Don't use PME ranks with GPUs and -npme=-1	commit \| commitdiff \| tree \| snapshot
2015-06-04	Mark Abraham	Fix naming from "Gromacs" to "GROMACS"	commit \| commitdiff \| tree \| snapshot
2015-06-04	Erik Lindahl	More new quotes	commit \| commitdiff \| tree \| snapshot
2015-06-04	Teemu Murtola	Fix potential FPE in selection tests	commit \| commitdiff \| tree \| snapshot
2015-06-04	Teemu Murtola	Refactor rst parsing for console output	commit \| commitdiff \| tree \| snapshot
2015-06-04	Teemu Murtola	Replace gromacs.7 man page with gmx.1	commit \| commitdiff \| tree \| snapshot
2015-06-04	Teemu Murtola	Document current help formatting	commit \| commitdiff \| tree \| snapshot
2015-06-04	Teemu Murtola	Basic support for titles within tool help	commit \| commitdiff \| tree \| snapshot
2015-06-04	Teemu Murtola	Support rst tables in tool help texts	commit \| commitdiff \| tree \| snapshot
2015-06-03	Alexey Shvetsov	Merge branch 'master' into pygromacs	commit \| commitdiff \| tree \| snapshot
2015-06-03	Roland Schulz	Use stack buffer for LINCS&bonded gather/scatter	commit \| commitdiff \| tree \| snapshot
2015-06-02	Rossen Apostolov	Converted random module to C++.	commit \| commitdiff \| tree \| snapshot
2015-05-30	Roland Schulz	Work-around for ICC 15 on Phi	commit \| commitdiff \| tree \| snapshot
2015-05-28	Teemu Murtola	Improve lists in user guide for selections	commit \| commitdiff \| tree \| snapshot
2015-05-28	Teemu Murtola	Additional selection examples	commit \| commitdiff \| tree \| snapshot
2015-05-27	Alexey Shvetsov	Merge branch 'master' into pygromacs	commit \| commitdiff \| tree \| snapshot
2015-05-27	Berk Hess	Refactoring of PME load balancing	commit \| commitdiff \| tree \| snapshot
2015-05-27	Mark Abraham	Fix warnings from GCC 5	commit \| commitdiff \| tree \| snapshot
2015-05-27	Rossen Apostolov	Converted pulling code to C++.	commit \| commitdiff \| tree \| snapshot
2015-05-26	Mark Abraham	Avoid possible floating-point exception	commit \| commitdiff \| tree \| snapshot
2015-05-26	Roland Schulz	Don't set CFLAGS for Phi in toolchain	commit \| commitdiff \| tree \| snapshot
2015-05-26	Mark Abraham	Convert ewald module to C++	commit \| commitdiff \| tree \| snapshot
2015-05-26	Mark Abraham	Fix use of hard-coded temporary filename	commit \| commitdiff \| tree \| snapshot
2015-05-25	Teemu Murtola	Overview docs for analysis nbsearch	commit \| commitdiff \| tree \| snapshot
2015-05-24	Teemu Murtola	Include selection keyword details in user guide	commit \| commitdiff \| tree \| snapshot
2015-05-23	Mark Abraham	Fix misuse of gmx_simd_check_and_reset_overflow	commit \| commitdiff \| tree \| snapshot
2015-05-23	Berk Hess	Removed static from variables in gmx_lapack	commit \| commitdiff \| tree \| snapshot
2015-05-22	Teemu Murtola	Allow any order for sections in 'gmx help -export'	commit \| commitdiff \| tree \| snapshot
2015-05-22	Teemu Murtola	Base to get all 'gmx help' contents to user guide	commit \| commitdiff \| tree \| snapshot
2015-05-22	Teemu Murtola	Merge release-5-0 into master	commit \| commitdiff \| tree \| snapshot
2015-05-22	Teemu Murtola	Avoid crash with empty reference for 'same as' selection	commit \| commitdiff \| tree \| snapshot
2015-05-22	Teemu Murtola	Add subsection depth to HelpWriterContext	commit \| commitdiff \| tree \| snapshot
2015-05-22	Teemu Murtola	Add note about atom order in selections	commit \| commitdiff \| tree \| snapshot
2015-05-21	Teemu Murtola	Restructure CommandLineModuleManager tests	commit \| commitdiff \| tree \| snapshot
2015-05-21	Mark Abraham	Add integration test for empty domain	commit \| commitdiff \| tree \| snapshot
2015-05-20	Teemu Murtola	Fix handling of real-valued 'to' selection ranges	commit \| commitdiff \| tree \| snapshot
2015-05-20	Teemu Murtola	Fix dependencies for regression test custom target	commit \| commitdiff \| tree \| snapshot
2015-05-20	Teemu Murtola	Some tests for 'gmx help -export rst'	commit \| commitdiff \| tree \| snapshot
2015-05-19	Mark Abraham	Add checks for correct use of SIMD headers.	commit \| commitdiff \| tree \| snapshot
2015-05-19	Mark Abraham	Refactor FFTW setup	commit \| commitdiff \| tree \| snapshot
2015-05-18	Teemu Murtola	Merge "Merge branch origin/release-5-0"	commit \| commitdiff \| tree \| snapshot
2015-05-17	Erik Lindahl	Added hacks for SIMD rvec/load store in lincs & bondeds	commit \| commitdiff \| tree \| snapshot
2015-05-17	Teemu Murtola	Move a few defines to buildinfo.h	commit \| commitdiff \| tree \| snapshot
2015-05-17	Mark Abraham	Merge branch origin/release-5-0	commit \| commitdiff \| tree \| snapshot
2015-05-16	Berk Hess	LINCS thread tasks can now be independent	commit \| commitdiff \| tree \| snapshot
2015-05-16	Mark Abraham	Suppress GCC5 warnings with internal Boost	commit \| commitdiff \| tree \| snapshot
2015-05-16	Magnus Lundborg	TNG version 1.7.5	commit \| commitdiff \| tree \| snapshot
2015-05-16	Alexey Shvetsov	Make bond-atomtypes case sensitive	commit \| commitdiff \| tree \| snapshot
2015-05-15	Szilard Pall	Assert the size of non-bonded GPU work units	commit \| commitdiff \| tree \| snapshot
2015-05-15	Alexey Shvetsov	Merge branch 'master' into pygromacs	commit \| commitdiff \| tree \| snapshot
2015-05-14	Mark Abraham	Fix own-FFTW build	commit \| commitdiff \| tree \| snapshot
2015-05-14	Szilard Pall	Merge release-4-6 into release-5-0	commit \| commitdiff \| tree \| snapshot
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