SYCL: Avoid using no_init read accessor in rocFFT
[alexxy/gromacs.git] / src /
2021-11-05 Andrey AlekseenkoSYCL: Avoid using no_init read accessor in rocFFT master
2021-11-05 Szilárd PállSplit simulationWork.useGpuBufferOps into separate...
2021-11-05 Mark AbrahamPermit tests to specify the refdata filename
2021-11-04 Szilárd PállMake stepWorkload.useGpuXBufferOps flag consistent
2021-11-04 Berk HessClean up index handing in make_bondeds_zone
2021-11-03 Andrey AlekseenkoUnify handling of GMX_ENABLE_GPU_TIMING and GMX_DISABLE...
2021-11-03 Magnus LundborgUpdate mdrun message to reflect that Cuda CC>=3.5 is...
2021-11-03 Magnus LundborgAdd TNG to trjconv doc and more details about TNG selec...
2021-11-03 Andrey AlekseenkoDisable fastmath with OpenCL on Intel devices
2021-11-03 Andrey AlekseenkoFix CUDA clang-tidy complaints
2021-11-03 Mark AbrahamImprove MessageStringCollector
2021-11-03 Andrey AlekseenkoAvoid allocating SYCL buffer on each call to PME solve
2021-11-03 Andrey AlekseenkoFix random typos
2021-11-03 Joe JordanRemove unused thole polarization rfac parameter
2021-11-03 Andrey AlekseenkoSYCL: Use acc.bind(cgh) instead of cgh.require(acc)
2021-11-02 Berk HessAdd second LINCS atom update task
2021-11-01 Mark AbrahamAdd missing MPI_Barrier to MpiTest
2021-11-01 Eliane BriandAdd DSSP v4 support to do_dssp
2021-11-01 Szilárd PállFix hipSYCL build with CUDA target
2021-10-30 Andrey AlekseenkoSilence clang-tidy warnings
2021-10-30 Andrey AlekseenkoSet up event consumption counter in DomDecMpiTests
2021-10-29 Magnus LundborgAllow TNG to TNG file conversion without time per frame...
2021-10-29 Alan GraySimplify GPU force reduction conditionals
2021-10-29 Berk HessReimplement constant acceleration groups
2021-10-29 Mark AbrahamGeneralize constraints on MPI rank counts for tests
2021-10-28 Berk HessDocument and clean up do_numbering()
2021-10-28 Berk HessUpdate copyright year for tests/grompp.cpp
2021-10-27 Andrey AlekseenkoDisable GPU buffer ops when using MTS
2021-10-27 Berk HessAdd Oliver Fleetwood as a contributor
2021-10-27 Szilárd PállUnify coordinate copy handling across GPU platforms
2021-10-27 Oliver FleetwoodAdd preprocessing and integration test for transformati...
2021-10-27 Joe JordanFix norm calculation in gmx_spatial
2021-10-27 Paul BauerFix link for dssp download
2021-10-27 Joe JordanThrow on failure in gmx_file_rename
2021-10-26 Kevin BoydAdd -maxtau option to gmx msd
2021-10-26 Mark AbrahamRemove short-circuit logic for OpenMP setup
2021-10-26 ejjordanAdd parser tests dependency to tests
2021-10-26 Alan GrayInsert barrier after each GPU halo test
2021-10-26 Mark AbrahamMinor improvements to gmx wham output
2021-10-26 Mark AbrahamRemove/replace many mentions of Jenkins
2021-10-25 Andrey AlekseenkoSilence Clang's constant-logical-operand warning
2021-10-24 Kevin BoydUpdate release notes for gmx msd and clear some TODOs
2021-10-22 Andrey AlekseenkoGet rid of sycl::buffer::reinterpret
2021-10-22 Mark AbrahamAdd utility dependency to libmdrun_test_infrastructure
2021-10-22 Andrey AlekseenkoActivate GPU update support in SYCL build
2021-10-22 Mark AbrahamFix cuda clang-tidy issues
2021-10-22 Magnus LundborgAvoid comparing Simd types to real 0 when making masks...
2021-10-21 Sebastian KehlFix use of simd-masks in gapsys softcore.
2021-10-21 Andrey AlekseenkoBalance event consumption for GPU update code path
2021-10-21 Magnus LundborgMinor code clean-up in the NB FEP kernel.
2021-10-21 Magnus LundborgImprove variable naming in NB FEP kernel for loop.
2021-10-21 Berk HessAdd lambda state to dhdl.xvg with AWH fep
2021-10-21 Andrey AlekseenkoUnify a bit decideWhetherToUseGpusForPme* functions
2021-10-21 Mark AbrahamRefactor PME tests for better usability
2021-10-21 Berk HessImprove AWH bias sharing documentation
2021-10-20 Andrey AlekseenkoFix compiler warnings with OpenCL + oneAPI 2021.4
2021-10-19 Roland SchulzFix warnings with Intel 2021.4
2021-10-19 Andrey AlekseenkoFix SYCL PME Solve kernel
2021-10-19 Mark AbrahamAnother clang-tidy fix for new GPU code
2021-10-18 Andrey AlekseenkoMerge release-2021 into master
2021-10-18 Andrey AlekseenkoFix UB when generating local indices for constraints
2021-10-18 Mark AbrahamFix clang-tidy error in new GPU code
2021-10-18 Andrey AlekseenkoDisable PME Mixed mode with FEP
2021-10-14 Alan GrayPipeline GPU PME Spline/Spread with PP Comms
2021-10-14 Andrey AlekseenkoImprove stability of ContinuationIsExact tests
2021-10-13 Berk HessMade gromacs work again without MPI
2021-10-13 Andrey AlekseenkoFix fft/CMakeLists when compiling with hipSYCL
2021-10-13 Mark AbrahamImplement PME solve in SYCL
2021-10-13 Andrey AlekseenkoFix clang-tidy complaints
2021-10-12 Andrey AlekseenkoStop timers in GpuForceReduction with no atoms
2021-10-11 M. Eric IrrgangFix typo in code comment.
2021-10-11 Alan GrayBug fix for irregular replex steps with GPU update
2021-10-11 Berk HessFix issues in AWH BiasSharing test
2021-10-11 M. Eric IrrgangNormalize API tests.
2021-10-11 M. Eric IrrgangMore robust preparation for MPI tests.
2021-10-10 M. Eric IrrgangSatisfy nblib dependencies with updated library targets.
2021-10-09 Andrey AlekseenkoSYCL: Reduce local memory usage of LINCS kernel
2021-10-08 Sebastian KehlAdapt testcases for gapsys softcore
2021-10-06 Pascal MerzImplement pull for modular simulator
2021-10-06 Andrey AlekseenkoFix misc-misplaced-const and unused-parameter warnings
2021-10-06 Artem ZhmurovAdd constraints test with multiple molecules
2021-10-06 Andrey AlekseenkoFix SYCL LINCS kernel
2021-10-06 Andrey AlekseenkoSYCL: Add missing barrier to NBNXM energy reduction
2021-10-06 Artem ZhmurovAdd missing synchronization calls in CUDA version of...
2021-10-06 Alan GrayRework GPU halo and state propagator streams and depend...
2021-10-05 Berk HessMake AWH bias sharing more flexible
2021-10-05 Sebastian KehlClang-format.
2021-10-05 Sebastian KehlMore sc-gapsys templates plus fix unused warnigs.
2021-10-05 Sebastian KehlFix typo introduced during rebase.
2021-10-05 Sebastian KehlTemplate sc-gapsys functions on computeForces.
2021-10-05 Sebastian KehlUncapitalize sc-gapsys parameters in input.
2021-10-05 Sebastian KehlRename sc-sigma-LJ-gapsys to sc-gapsys-sigma-LJ.
2021-10-05 Sebastian KehlRename sc-scale-X-gapsys to sc-gapsys-scale-X.
2021-10-05 Sebastian KehlGuard for epsfac equals zero in sc-gapsys.
2021-10-05 Sebastian KehlFix random fpe errors by proper initialization.
2021-10-05 Sebastian KehlClang-format.
2021-10-05 Sebastian KehlFix some more double literals.
2021-10-05 Sebastian KehlFix port of gapsys-LJ to simd.
2021-10-05 Sebastian KehlFix range checks for new parameters.
2021-10-05 Sebastian KehlFix sign in 14-interactions with sc-gapsys.
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