"forces and energies will be (re)calculated. Neighbor searching will be",
"performed for every frame, unless [TT]nstlist[tt] is zero",
"(see the [TT].mdp[tt] file).[PAR]",
- "ED (essential dynamics) sampling is switched on by using the [TT]-ei[tt]",
- "flag followed by an [TT].edi[tt] file.",
- "The [TT].edi[tt] file can be produced using options in the essdyn",
- "menu of the WHAT IF program. [TT]mdrun[tt] produces a [TT].xvg[tt] output file that",
+ "ED (essential dynamics) sampling and/or additional flooding potentials",
+ "are switched on by using the [TT]-ei[tt] flag followed by an [TT].edi[tt]",
+ "file. The [TT].edi[tt] file can be produced with the [TT]make_edi[tt] tool",
+ "or by using options in the essdyn menu of the WHAT IF program.",
+ "[TT]mdrun[tt] produces a [TT].xvg[tt] output file that",
"contains projections of positions, velocities and forces onto selected",
"eigenvectors.[PAR]",
"When user-defined potential functions have been selected in the",