#
# This file is part of the GROMACS molecular simulation package.
#
--# Copyright (c) 2009,2010,2011,2012,2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++# Copyright (c) 2009,2010,2011,2012,2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
# and including many others, as listed in the AUTHORS file in the
# top-level source directory and at http://www.gromacs.org.
#
# This file is part of the GROMACS molecular simulation package.
#
--# Copyright (c) 2015,2016,2017,2018, by the GROMACS development team, led by
++# Copyright (c) 2015,2016,2017,2018,2019, by the GROMACS development team, led by
# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
# and including many others, as listed in the AUTHORS file in the
# top-level source directory and at http://www.gromacs.org.
#
# This file is part of the GROMACS molecular simulation package.
#
--# Copyright (c) 2017,2018, by the GROMACS development team, led by
++# Copyright (c) 2017,2018,2019, by the GROMACS development team, led by
# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
# and including many others, as listed in the AUTHORS file in the
# top-level source directory and at http://www.gromacs.org.
#
# This file is part of the GROMACS molecular simulation package.
#
--# Copyright (c) 2012,2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++# Copyright (c) 2012,2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
# and including many others, as listed in the AUTHORS file in the
# top-level source directory and at http://www.gromacs.org.
#
# This file is part of the GROMACS molecular simulation package.
#
--# Copyright (c) 2014,2015,2016,2017,2018, by the GROMACS development team, led by
++# Copyright (c) 2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
# and including many others, as listed in the AUTHORS file in the
# top-level source directory and at http://www.gromacs.org.
#
# This file is part of the GROMACS molecular simulation package.
#
--# Copyright (c) 2014,2015,2016,2017,2018, by the GROMACS development team, led by
++# Copyright (c) 2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
# and including many others, as listed in the AUTHORS file in the
# top-level source directory and at http://www.gromacs.org.
how-to/visualize.rst
install-guide/index.rst
release-notes/index.rst
+ release-notes/highlights.rst
+ release-notes/features.rst
+ release-notes/performance.rst
+ release-notes/tools.rst
+ release-notes/bugs-fixed.rst
+ release-notes/removed-functionality.rst
+ release-notes/deprecated-functionality.rst
+ release-notes/portability.rst
+ release-notes/miscellaneous.rst
+ release-notes/2019/2019.1.rst
release-notes/2019/major/highlights.rst
release-notes/2019/major/features.rst
release-notes/2019/major/performance.rst
#
# This file is part of the GROMACS molecular simulation package.
#
--# Copyright (c) 2018, by the GROMACS development team, led by
++# Copyright (c) 2018,2019, by the GROMACS development team, led by
# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
# and including many others, as listed in the AUTHORS file in the
# top-level source directory and at http://www.gromacs.org.
#
# This file is part of the GROMACS molecular simulation package.
#
--# Copyright (c) 2018, by the GROMACS development team, led by
++# Copyright (c) 2018,2019, by the GROMACS development team, led by
# Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
# and including many others, as listed in the AUTHORS file in the
# top-level source directory and at http://www.gromacs.org.
/*
* This file is part of the GROMACS molecular simulation package.
*
-- * Copyright (c) 2009,2010,2011,2012,2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2009,2010,2011,2012,2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
/*
* This file is part of the GROMACS molecular simulation package.
*
-- * Copyright (c) 2014,2015,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2014,2015,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
/*
* This file is part of the GROMACS molecular simulation package.
*
-- * Copyright (c) 2010,2011,2012,2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2010,2011,2012,2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
*
* Copyright (c) 1991-2000, University of Groningen, The Netherlands.
* Copyright (c) 2001-2010, The GROMACS development team.
-- * Copyright (c) 2012,2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2012,2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
/*
* This file is part of the GROMACS molecular simulation package.
*
-- * Copyright (c) 2012,2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2012,2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
--- /dev/null
- * Copyright (c) 2018, by the GROMACS development team, led by
+ /*
+ * This file is part of the GROMACS molecular simulation package.
+ *
++ * Copyright (c) 2018,2019, by the GROMACS development team, led by
+ * Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
+ * and including many others, as listed in the AUTHORS file in the
+ * top-level source directory and at http://www.gromacs.org.
+ *
+ * GROMACS is free software; you can redistribute it and/or
+ * modify it under the terms of the GNU Lesser General Public License
+ * as published by the Free Software Foundation; either version 2.1
+ * of the License, or (at your option) any later version.
+ *
+ * GROMACS is distributed in the hope that it will be useful,
+ * but WITHOUT ANY WARRANTY; without even the implied warranty of
+ * MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU
+ * Lesser General Public License for more details.
+ *
+ * You should have received a copy of the GNU Lesser General Public
+ * License along with GROMACS; if not, see
+ * http://www.gnu.org/licenses, or write to the Free Software Foundation,
+ * Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA.
+ *
+ * If you want to redistribute modifications to GROMACS, please
+ * consider that scientific software is very special. Version
+ * control is crucial - bugs must be traceable. We will be happy to
+ * consider code for inclusion in the official distribution, but
+ * derived work must not be called official GROMACS. Details are found
+ * in the README & COPYING files - if they are missing, get the
+ * official version at http://www.gromacs.org.
+ *
+ * To help us fund GROMACS development, we humbly ask that you cite
+ * the research papers on the package. Check out http://www.gromacs.org.
+ */
+ /*! \libinternal \file
+ * \brief Declare RAII helpers for OpenCL types, along with
+ * supporting type traits.
+ *
+ * \author Mark Abraham <mark.j.abraham@gmail.com>
+ * \inlibraryapi
+ */
+ #ifndef GMX_GPU_UTILS_OCLRAII_H
+ #define GMX_GPU_UTILS_OCLRAII_H
+
+ #include "gromacs/gpu_utils/gmxopencl.h"
+
+ namespace gmx
+ {
+
+ /*! \libinternal \brief Stub for OpenCL type traits */
+ template <typename cl_type>
+ struct OpenClTraits;
+
+ /*! \libinternal \brief Implements common trait infrastructure for OpenCL types. */
+ template <typename cl_type>
+ struct OpenClTraitsBase
+ {
+ //! Type of the function that will release a handle of this type.
+ using ReleaserType = cl_int(*)(cl_type);
+ };
+
+ /*! \libinternal \brief Implements traits for cl_context. */
+ template <>
+ struct OpenClTraits<cl_context> : public OpenClTraitsBase<cl_context>
+ {
+ //! Function that will release a handle of this type.
+ static constexpr ReleaserType releaser = clReleaseContext;
+ };
+
+ /*! \libinternal \brief Implements traits for cl_command_queue. */
+ template <>
+ struct OpenClTraits<cl_command_queue> : public OpenClTraitsBase<cl_command_queue>
+ {
+ //! Function that will release a handle of this type.
+ static constexpr ReleaserType releaser = clReleaseCommandQueue;
+ };
+
+ /*! \libinternal \brief Implements traits for cl_program. */
+ template <>
+ struct OpenClTraits<cl_program> : public OpenClTraitsBase<cl_program>
+ {
+ //! Function that will release a handle of this type.
+ static constexpr ReleaserType releaser = clReleaseProgram;
+ };
+
+ /*! \libinternal \brief Implements traits for cl_kernel. */
+ template <>
+ struct OpenClTraits<cl_kernel> : public OpenClTraitsBase<cl_kernel>
+ {
+ //! Function that will release a handle of this type.
+ static constexpr ReleaserType releaser = clReleaseKernel;
+ };
+
+ /*! \libinternal \brief Wrapper of OpenCL type \c cl_type to implement RAII.
+ *
+ * Works by calling the releaser function associated with cl_type
+ * by OpenClTraits.
+ *
+ * Simple copying and assignment are not supported, because there's no
+ * need for that, and would require OpenCL API calls for deep copies
+ * if they were needed. Move and move assignment are fine, however. */
+ template <typename cl_type>
+ class ClHandle
+ {
+ public:
+ //! Constructor that takes an already created handle.
+ explicit ClHandle(cl_type handle) : handle_(handle) {}
+ //! Destructor that calls the releaser associated with cl_type.
+ ~ClHandle() { OpenClTraits<cl_type>::releaser(handle_); }
+ //! Deleted default constructor.
+ ClHandle() = delete;
+ //! Deleted assignment operator.
+ ClHandle &operator=(const ClHandle &) = delete;
+ //! Deleted copy constructor.
+ ClHandle(const ClHandle &) = delete;
+ //! Default move assignment operator.
+ ClHandle &operator=(ClHandle &&) = default;
+ //! Default copy constructor.
+ ClHandle(ClHandle &&) = default;
+ /*! \brief Convenience conversion operator so the wrapper type
+ * can simply convert to the wrapped type. */
+ operator cl_type() const { return handle_; }
+ private:
+ //! The wrapped object.
+ cl_type handle_;
+ };
+
+ //! Convenience declarations.
+ /*! @{ */
+ using ClContext = ClHandle<cl_context>;
+ using ClCommandQueue = ClHandle<cl_command_queue>;
+ using ClProgram = ClHandle<cl_program>;
+ using ClKernel = ClHandle<cl_kernel>;
+ /*! @} */
+
+ } // namespace
+
+ #endif
*
* Copyright (c) 1991-2000, University of Groningen, The Netherlands.
* Copyright (c) 2001-2004, The GROMACS development team.
-- * Copyright (c) 2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
*
* Copyright (c) 1991-2000, University of Groningen, The Netherlands.
* Copyright (c) 2001-2004, The GROMACS development team.
-- * Copyright (c) 2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
*
* Copyright (c) 1991-2000, University of Groningen, The Netherlands.
* Copyright (c) 2001-2004, The GROMACS development team.
-- * Copyright (c) 2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
*
* Copyright (c) 1991-2000, University of Groningen, The Netherlands.
* Copyright (c) 2001-2004, The GROMACS development team.
-- * Copyright (c) 2011,2012,2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2011,2012,2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
*
* Copyright (c) 1991-2000, University of Groningen, The Netherlands.
* Copyright (c) 2001-2004, The GROMACS development team.
-- * Copyright (c) 2011,2012,2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2011,2012,2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
/*
* This file is part of the GROMACS molecular simulation package.
*
-- * Copyright (c) 2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
/*
* This file is part of the GROMACS molecular simulation package.
*
-- * Copyright (c) 2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
* This file is part of the GROMACS molecular simulation package.
*
* Copyright (c) 1991-2006 David van der Spoel, Erik Lindahl, Berk Hess, University of Groningen.
- * Copyright (c) 2013,2014,2015,2016,2017, by the GROMACS development team, led by
- * Copyright (c) 2013,2014,2015,2016,2017,2018, by the GROMACS development team, led by
++ * Copyright (c) 2013,2014,2015,2016,2017,2018,2019, by the GROMACS development team, led by
* Mark Abraham, David van der Spoel, Berk Hess, and Erik Lindahl,
* and including many others, as listed in the AUTHORS file in the
* top-level source directory and at http://www.gromacs.org.
biod.pnpi.spb.ru / alexxy / gromacs.git / commitdiff