generic, preferred for input
:ref:`edi`
essential dynamics constraints input for :ref:`gmx mdrun`
-:ref:`edo`
- essential dynamics constraints output for :ref:`gmx mdrun`
:ref:`eps`
Encapsulated Postscript
:ref:`log`
output from the programs in the <tt>ESSDYN</tt> menu of the
<A HREF="http://www.sander.embl-heidelberg.de/whatif/">WHAT IF</A> program.
-.. _edo:
-
-edo
----
-
-Files with the edo file extension are generated by :ref:`gmx mdrun`
-if Molecular Dynamics is performed with Essential Dynamics
-constraints. Depending on the parameters set in the :ref:`edi`:
-file, edo files may contain projections of positions,
-velocities and forces onto selected eigenvectors during the run as well
-as RMSD values, or information about specific types of constraints.
-Specific results can be extracted from the edo files with standard Unix
-utilities like ``awk``.
-
.. _edr:
edr