admin/gitlab-ci/gromacs.gitlab-ci.yml

   1 # Test goal: Initial build with close-to-default settings that always needs to pass before follow-up CI stages run
   2 # Test intents (should change rarely and conservatively):
   3 #   OS: Ubuntu oldest supported
   4 #   Compiler: Clang
   5 #   Build type: Debug
   6 #   CMake: oldest supported
   7 #   GPU: no
   8 #   SIMD: no
   9 #   Scope: configure, build, unit tests
  10 # Test implementation choices (free to change as needed):
  11 #   OS: Ubuntu 20.04
  12 #   Compiler: Clang 12
  13 #   FFT: FFTW3
  14 #   Parallelism nt/ntomp: 4/2
  15
  16 simple-build:
  17   # Test scope: configure, build, unit tests
  18   extends:
  19     - .variables:default
  20     - .use-ccache
  21     - .use-clang:base
  22     - .rules:basic-push
  23   stage: pre-build
  24   image: ${CI_REGISTRY}/gromacs/gromacs/ci-ubuntu-20.04-llvm-12
  25
  26   variables:
  27     CMAKE: /usr/local/cmake-3.16.3/bin/cmake
  28     KUBERNETES_CPU_LIMIT: 8
  29     KUBERNETES_CPU_REQUEST: 4
  30     KUBERNETES_MEMORY_REQUEST: 8Gi
  31     CMAKE_SIMD_OPTIONS: "-DGMX_SIMD=None"
  32     CMAKE_MPI_OPTIONS: "-DGMX_THREAD_MPI=ON"
  33     CMAKE_PRECISION_OPTIONS: "-DGMX_DOUBLE=OFF"
  34     CMAKE_BUILD_TYPE_OPTIONS: "-DCMAKE_BUILD_TYPE=Debug"
  35     CMAKE_GPU_OPTIONS: "-DGMX_GPU=OFF"
  36     CMAKE_GMXAPI_OPTIONS: "-DGMX_PYTHON_PACKAGE=OFF"
  37     COMPILER_MAJOR_VERSION: 12
  38     BUILD_DIR: simple-build
  39   script:
  40     - CMAKE=${CMAKE:-$(which cmake)}
  41     - echo $CMAKE_COMPILER_SCRIPT
  42     - echo $CMAKE_EXTRA_OPTIONS
  43     - echo $CMAKE_SIMD_OPTIONS
  44     - echo $CMAKE_GPU_OPTIONS
  45     - echo $CMAKE_MPI_OPTIONS
  46     - echo $CMAKE_PRECISION_OPTIONS
  47     - echo $CMAKE_BUILD_TYPE_OPTIONS
  48     - echo $CMAKE_GMXAPI_OPTIONS
  49     - if [[ -d $BUILD_DIR ]] ; then
  50       echo "Cleaning up build directory" ;
  51       rm -rf $BUILD_DIR && mkdir $BUILD_DIR ;
  52       else
  53       echo "Preparing new build directory" ;
  54       mkdir $BUILD_DIR ;
  55       fi
  56     - cd $BUILD_DIR
  57     - which $CMAKE
  58     - $CMAKE --version
  59     - $CMAKE ..
  60       -DCMAKE_C_COMPILER_LAUNCHER=ccache -DCMAKE_CXX_COMPILER_LAUNCHER=ccache
  61       $CMAKE_COMPILER_SCRIPT
  62       $CMAKE_EXTRA_OPTIONS
  63       $CMAKE_SIMD_OPTIONS
  64       $CMAKE_MPI_OPTIONS
  65       $CMAKE_PRECISION_OPTIONS
  66       $CMAKE_BUILD_TYPE_OPTIONS
  67       $CMAKE_GPU_OPTIONS
  68       $CMAKE_GMXAPI_OPTIONS
  69       -DCMAKE_INSTALL_PREFIX=../$INSTALL_DIR -DGMX_COMPILER_WARNINGS=ON
  70       2>&1 | tee cmakeLog.log
  71     - awk '/CMake Warning/,/^--|^$/' cmakeLog.log | tee cmakeErrors.log
  72     - if [ -s cmakeErrors.log  ] ; then echo "Found CMake warning while processing build"; cat cmakeErrors.log ; exit 1; fi
  73     - $CMAKE --build . -- -j$KUBERNETES_CPU_LIMIT 2>&1 | tee buildLogFile.log
  74     - $CMAKE --build . --target tests -- -j$KUBERNETES_CPU_LIMIT 2>&1 | tee testBuildLogFile.log
  75     - awk '/warning/,/warning.*generated|^$/' buildLogFile.log testBuildLogFile.log
  76       | grep -v "CMake" | tee buildErrors.log || true
  77     - grep "cannot be built" buildLogFile.log testBuildLogFile.log | tee -a buildErrors.log || true
  78     - $CMAKE --build . --target install 2>&1 | tee installBuildLogFile.log
  79     - if [ -s buildErrors.log ] ; then echo "Found compiler warning during build"; cat buildErrors.log; exit 1; fi
  80     - ctest -D ExperimentalTest --output-on-failure | tee ctestLog.log || true
  81     - awk '/The following tests FAILED/,/^Errors while running CTest|^$/'
  82       ctestLog.log | tee ctestErrors.log
  83     - xsltproc $CI_PROJECT_DIR/scripts/CTest2JUnit.xsl Testing/`head -n 1 < Testing/TAG`/Test.xml > JUnitTestResults.xml
  84     - if [ -s ctestErrors.log ] ; then
  85       echo "Error during running ctest";
  86       exit 1;
  87       fi
  88     - cd ..
  89   artifacts:
  90     reports:
  91       junit: $BUILD_DIR/JUnitTestResults.xml
  92     paths:
  93       - $BUILD_DIR/*log
  94     when: always
  95     expire_in: 1 week