2 *.c filter=uncrustify gmx-doxygen
3 *.cpp filter=uncrustify gmx-doxygen
5 *.h filter=uncrustify gmx-doxygen
6 *.cuh filter=uncrustify
7 CMakeLists.txt filter=copyright
8 *.cmake filter=copyright
9 *.cmakein filter=copyright
11 *.l filter=includesort
12 *.y filter=includesort
13 *.pre filter=includesort
14 *.tex filter=copyright
16 # Exceptions: extra files to include
17 admin/*.sh filter=copyright
18 admin/git-pre-commit filter=copyright
19 # Exceptions: files to exclude
21 cmake/CheckC*CompilerFlag.cmake !filter
22 cmake/FindBLAS.cmake !filter
23 cmake/FindLAPACK.cmake !filter
24 cmake/ThreadMPI.cmake !filter
25 cmake/FindPythonLibrary.cmake !filter
26 cmake/FindNumPy.cmake !filter
27 cmake/FindSIP.* !filter
28 cmake/Platform/BluegeneQ*.cmake !filter
29 cmake/*.c -filter -gmx-doxygen
30 cmake/*.cpp -filter -gmx-doxygen
31 cmake/*.c.cmakein !filter
32 docs/doxygen/Doxyfile-*.cmakein !filter
33 docs/doxygen/*.cpp !filter
34 docs/doxygen/examples/*.cpp filter=uncrustify_only
35 docs/doxygen/examples/*.c filter=uncrustify_only
36 docs/manual/UseLATEX.cmake !filter
37 scripts/GMXRC.* !filter
38 scripts/make_gromos_rtp.py !filter
39 src/contrib/* -filter -gmx-doxygen
40 src/gromacs/gmxlib/nonbonded/preprocessor/gmxpreprocess.py !filter
41 src/gromacs/linearalgebra/gmx_blas/* !filter
42 src/gromacs/linearalgebra/gmx_lapack/* !filter
43 src/gromacs/selection/parser.cpp -filter -gmx-doxygen
44 src/gromacs/selection/parser.h -filter -gmx-doxygen
45 src/gromacs/selection/scanner.cpp -filter -gmx-doxygen
46 src/gromacs/selection/scanner_flex.h -filter
47 nb_kernel_Elec* filter=copyright -gmx-doxygen
48 nb_kernel*pre filter=copyright