for (; i != j; ++i){
flag = !(SecondaryStructuresStatusMap[i].isBreakPartnerWith(&SecondaryStructuresStatusMap[i + 1]) && SecondaryStructuresStatusMap[i + 1].isBreakPartnerWith(&SecondaryStructuresStatusMap[i]));
- std::cout << "testin " << i << " and " << i + 1 << std::endl;
}
if (!flag){
std::string secondaryStructures::patternSearch(){
+ NoChainBreaksBetween(75, 80);
+
// analyzeBridgesAndLaddersPatterns();
analyzeTurnsAndHelicesPatterns();
// analyzePPHelicesPatterns();