alexxy/gromacs.git
2018-09-18 Berk HessIntroduce extractILists helper function
2018-09-18 Mark AbrahamSeparated partitioning and dlb code within domdec
2018-09-18 Pascal MerzIntroduce stop handler
2018-09-18 Pascal MerzIntroduce checkpoint handler
2018-09-18 Pascal MerzIntroduce reset handler
2018-09-18 Mark AbrahamAdd not_null from GSL
2018-09-18 Roland SchulzFix bitmask printing
2018-09-18 Berk HessRefactor ddbox handling
2018-09-17 M. Eric IrrgangFramework in which to build gmxapi.
2018-09-17 Paul BauerProperly initialize idef in topologies
2018-09-17 Berk HessMove ifunc stuff from idef.h to ifunc.h
2018-09-17 Joe JordanRefactor pdb2gmx in c++ framework
2018-09-17 Kevin BoydAdded basic tests for gmx msd
2018-09-17 Berk HessChange pointers to InteractionList to references
2018-09-17 Pascal MerzFix typo in DD load balancing printing
2018-09-16 Berk HessRefactoring in DD redistribute
2018-09-16 Joe JordanMove variables around in pdb2gmx
2018-09-15 Roland SchulzReplace slave with agent
2018-09-14 Berk HessRefactor getAtomGroupDistribution()
2018-09-14 Paul BauerRemove LaTeX file writing from gmx check
2018-09-14 M. Eric IrrgangRearrange mdrun/runner.h
2018-09-14 Berk HessChange gmx_moltype_t.ilist to InteractionLists
2018-09-14 Paul BauerIntroduce gmx report-methods
2018-09-14 Roland SchulzWarn for type mismatch for gmx printf like functions 3/3
2018-09-13 Roland SchulzRemove sparc64_hpc_ace nonbonded kernels
2018-09-13 Berk HessAdd C++ version of t_ilist
2018-09-13 Roland SchulzRemove useless comments
2018-09-13 Mark AbrahamEliminate main.h
2018-09-12 Roland SchulzWarn for type mismatch for gmx printf like functions 2/3
2018-09-12 Roland SchulzAdd SSE2 + double config
2018-09-12 Berk HessConvert vsite structs to C++
2018-09-12 M. Eric IrrgangSimplify add_suffix_to_output_names()
2018-09-12 Roland SchulzRemove cpluscplus ifdefs
2018-09-12 Roland SchulzFix clang-tidy warnings for OCL
2018-09-12 Berk HessConvert DD gmx_reverse_top_t to C++
2018-09-11 Roland SchulzFix SSE4.1 after change to C++
2018-09-11 Mark AbrahamReplace C-style library file handling with RAII approaches
2018-09-11 Mark AbrahamImprove DD logging
2018-09-11 Roland SchulzCompile nonbonded kernels as C++
2018-09-11 David van der... Added option to gmx nmeig to print ZPE.
2018-09-11 Mark AbrahamReplace readConformation with TopologyInformation
2018-09-11 Pascal MerzAdded trivial const qualifiers
2018-09-11 Pascal MerzInitialize total_vir and pres in init_md
2018-09-10 M. Eric IrrgangRemove const from pointers in t_filenm.
2018-09-10 Roland SchulzReplace rounding using int(x+0.5) with roundToInt
2018-09-10 Roland SchulzAdd roundToInt
2018-09-09 Mark AbrahamChange TopologyInformation implementation
2018-09-09 Paul BauerRemove macro for group type in topology
2018-09-07 Mark AbrahamFix grompp memory leaks
2018-09-07 Mark AbrahamMinor fixes to GPU build system
2018-09-07 Roland Schulzclang-tidy: override
2018-09-07 Magnus LundborgCheck q perturbation when PME on GPU is tested
2018-09-07 Mark AbrahamSeparate simulation database used in tests
2018-09-07 Roland SchulzSimplify Allocator
2018-09-06 Roland SchulzHostAllocator: Remove unnecessary template
2018-09-06 Roland SchulzRemove pin/unpin from HostAllocator
2018-09-06 Roland SchulzChange CanBePinned to PinnedIfSupported
2018-09-05 Roland SchulzRemove meta information from host allocator policy
2018-09-05 Paul BauerChanges to documentation build script
2018-09-05 M. Eric IrrgangAdjust loader path resolution on Mac OS X.
2018-09-05 Mark AbrahamBe quieter when failing to detect GPUs
2018-09-05 Paul BauerImprove stability of parallel documentation build
2018-09-03 Paul BauerFix error in documentation build
2018-09-03 Paul BauerAllow documentation to build in parallel
2018-09-03 Roland SchulzReduce duplication in gpu_utils
2018-09-02 Roland SchulzTurn DlbState into scoped enum
2018-08-30 Paul BauerMore fixes from clang-tidy-7
2018-08-30 Christian BlauConvert essential dynamics C-structs to C++ pt1.
2018-08-30 Christian BlauStore essential dynamics parameters as vectors instead...
2018-08-30 Mark AbrahamUpdate testing matrices for coverage and speed
2018-08-29 Mark AbrahamMerge branch release-2018
2018-08-29 M. Eric IrrgangAllow extensible MDModules and forceProviders.
2018-08-29 Roland SchulzDocument clang-tidy libstdc++ incompatibility
2018-08-29 Berk HessRefactor wall potential calculation
2018-08-29 Roland SchulzUse more const in hardwaretopology
2018-08-29 Roland SchulzFix clang-tidy build with libstdc++ >= 7
2018-08-29 Mark AbrahamMove clang-tidy build
2018-08-28 Mark AbrahamFix more clang-tidy issues
2018-08-28 Szilárd PállQuiet cmake about clFFT not found after first run
2018-08-28 boristimUpdates to gmx cluster
2018-08-28 Roland SchulzAdd hard limit for line length
2018-08-28 Paul BauerFix documentation build without imagemagick
2018-08-27 Mark AbrahamFix use of nullptr
2018-08-27 Aleksei IupinovPrepare pme-gpu-types.h for OpenCL
2018-08-27 Paul BauerTransfer information from old how-to section
2018-08-27 Roland SchulzEnable more clang-tidy checks for new code
2018-08-26 Alexey ShvetsovAdd basic operations for gmx::BasicVector<>
2018-08-24 Berk HessReplace gmx_hash_t by HashedMap
2018-08-24 Berk HessMerge "Merge branch release-2018"
2018-08-24 Berk HessAdd size optimization to HashedMap
2018-08-24 Berk HessAdd tests for HashedMap
2018-08-24 Mark AbrahamFix build without TNG
2018-08-24 Mark AbrahamMerge branch release-2018
2018-08-24 Joe Jordanchange some char to string in gmxpreprocess
2018-08-23 Paul BauerUpdate to prepare for 2018.4 point release
2018-08-23 Paul BauerVersion 2018.3
2018-08-22 Paul BauerFix trjconv when running without a structure file
2018-08-22 Mark AbrahamFix handling of counter resets
2018-08-22 Berk HessFix missing interactions with GPU and DD
2018-08-22 Joe JordanFix pdb2gmx -chainsep
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