alexxy/gromacs.git
2016-01-25 Mark AbrahamMerge branch release-5-1
2016-01-24 Berk HessFix exact continuation from non-energy steps
2016-01-24 Berk HessFix energy file continuation with md-vv
2016-01-24 Mark AbrahamUpdate references to HTML and online documentation
2016-01-24 Teemu MurtolaDocument limitations on 32-bit Linux
2016-01-24 Berk HessFix energy average with continuation
2016-01-20 Szilárd PállMerge remote-tracking branch 'origin/release-5-1' into...
2016-01-20 David van der... Couple of new quotes
2016-01-20 Carsten KutznerMade g_tune_pme work with -cpi -deffnm combination
2016-01-14 Mark AbrahamPermit customized testing of grompp and mdrun
2016-01-13 Mark AbrahamAllowed NVML support to be toggled
2016-01-12 Mark AbrahamMerge branch release-5-0 into release-5-1
2016-01-12 Teemu MurtolaMake GMX_MPI always defined to 0/1
2016-01-12 Teemu MurtolaMove flags out of t_trxframe
2016-01-12 Teemu MurtolaRemove historical times from t_trxframe
2016-01-12 Teemu MurtolaSupport passing tarball MD5 for webpage build
2016-01-12 Teemu MurtolaRemove vmdplugin from t_trxframe
2016-01-11 Teemu MurtolaConvert more config.h defines to 0/1
2016-01-11 Mark AbrahamImproved update_coords
2016-01-10 Teemu MurtolaSupport trajectory analysis with any atom subset
2016-01-10 Teemu MurtolaSupport frames with atom subsets in selections
2016-01-10 Teemu MurtolaSupport arbitrary subset trajectories in poscalc.*
2016-01-10 Teemu MurtolaMake file names in fatal error messages more robust
2016-01-10 Teemu MurtolaDo not warn about missing OpenMP with GMX_GPU=OFF
2016-01-10 Teemu MurtolaMore config.h macros to 0/1
2016-01-10 Teemu MurtolaConvert some config.h macros to use 0/1
2016-01-09 Szilárd Pállsplit NBNXN CUDA kernels into four compilation units
2016-01-08 Berk HessFix PME load balancing skipping a setup
2016-01-08 Mark AbrahamImprove tpr header version handling
2016-01-08 Mark AbrahamMerge branch release-5-1
2016-01-07 Mark AbrahamFix some mdrun header dependencies
2016-01-07 Mark AbrahamAvoid more C++ bindings for MPI
2016-01-07 Mark AbrahamDocument how potential-switch works
2016-01-07 Mark AbrahamStop using UNDEFINED as name of a symbol
2016-01-07 Mark AbrahamRemove fields used only for SD2
2016-01-07 Mark AbrahamBackport md-vv fixes
2016-01-07 Mark AbrahamRemove SD2 integrator
2016-01-07 David van der... Made normal modes work with shells and vsites
2016-01-07 Michael ShirtsFixes two problems related to restarts for vv.
2016-01-06 Mark AbrahamFix spurious gcc warning
2016-01-05 Teemu MurtolaUpdate packaging build
2016-01-05 Mark AbrahamFix logic for DD missing-interactions check
2016-01-05 Szilard Pallremove duplicate macros and enable Wundef in CUDA
2016-01-05 Mark AbrahamUse EXPECT_TRUE and EXPECT_FALSE in new SIMD tests
2016-01-04 Erik LindahlFix unnecessary SIMD warning
2016-01-04 Mark AbrahamChange GMX_DOUBLE to be always defined
2016-01-01 Szilard PallFix xlc+CUDA workaround in gmxManageNvccConfig
2015-12-31 Teemu MurtolaReport used defines in check-source
2015-12-29 Berk HessCorrect vector check of gmx check
2015-12-29 Teemu MurtolaPackaging build script for web site
2015-12-29 Teemu MurtolaReduce inputrec.h dependencies
2015-12-28 Mark AbrahamCreate invertmatrix.h
2015-12-28 Mark AbrahamMerge branch release-5-1
2015-12-27 Erik LindahlExtended SIMD, implementation for Intel MIC
2015-12-27 Teemu MurtolaImprove text writing in help output
2015-12-27 Roland SchulzFix G++ 4.7.0
2015-12-27 Teemu MurtolaSource packaging with new releng
2015-12-27 Teemu MurtolaFurther vec.h cleanup
2015-12-27 Mark AbrahamFix some OpenCL issues
2015-12-27 Berk HessReorganized domdec initialization
2015-12-27 Erik LindahlAvoid using aligned member variables in SIMD tests
2015-12-26 Alexey ShvetsovMake moleculetype case sensitive
2015-12-26 Szilard PallImprove documentation on OpenCL issue with NVIDIA
2015-12-26 Teemu MurtolaClean up vec.h
2015-12-24 Mark AbrahamMoved responsibility for f_global
2015-12-24 Mark AbrahamShell code cleanup
2015-12-24 Erik LindahlExtended SIMD, implementation for IBM Power7/8 VSX
2015-12-24 Erik LindahlIBM Power6 VMX extended SIMD
2015-12-24 Erik LindahlExtended SIMD, impl for Arm Neon and 64-bit Neon Asimd
2015-12-24 Teemu MurtolaAdd functionality to TextWriter
2015-12-21 Erik LindahlExtended SIMD, implementation for BlueGene/Q
2015-12-21 Erik LindahlExtended SIMD implementation for 256-bit AVX and AVX2
2015-12-20 Erik LindahlNext-generation SIMD, for SSE2, SSE4.1 and 128-bit AVX
2015-12-20 Teemu MurtolaFix most warnings with Doxygen 1.8.10
2015-12-20 Berk HessMerge release-5-1 into master
2015-12-19 Berk HessBring performance estimation up to date
2015-12-19 Erik LindahlFix compiler warning in cpuinfo for non-x86 architectures
2015-12-19 Teemu MurtolaUpdate versioning for new scheme
2015-12-17 Berk HessRemoved topology pointers from DD struct
2015-12-17 Mark AbrahamSimplified energy-summation code
2015-12-16 Teemu MurtolaMove calcgrid.* to fft/
2015-12-16 Berk HessAdd one element to state rvec arrays
2015-12-16 Erik LindahlNext-generation SIMD module, reference implementation
2015-12-15 Erik LindahlC++ math function cleanup
2015-12-15 Teemu MurtolaMove main.*, splitter.*, gmx_omp_nthreads.* to mdlib
2015-12-15 Teemu MurtolaMove readinp.* and warninp.* to fileio/
2015-12-15 Teemu MurtolaMove hardware detection to hardware/
2015-12-15 Teemu MurtolaMove some mdrun code out of gmxlib/
2015-12-15 Teemu MurtolaMove gpu_utils etc. out of gmxlib
2015-12-14 Teemu MurtolaInstall baseversion.h
2015-12-13 Szilard PallOpenCL code cleanup
2015-12-12 Teemu MurtolaCreate separate module for trajectory data
2015-12-12 Berk HessRemoved unused mdrun option -dn
2015-12-12 Teemu MurtolaMove disre.* and orires.* to listed-forces/
2015-12-12 Teemu MurtolaMove ifunc.* to topology/
2015-12-12 Teemu MurtolaMove put_atoms_in_box_omp() to sim_util.*
2015-12-12 Teemu MurtolaRemove topology -> fileio dependency
2015-12-12 Mark AbrahamBroke up copyright.*
2015-12-12 Mark AbrahamRequire Nose-Hoover with MTTK
2015-12-12 Christoph JunghansAdResS: lost performance tweak
next