alexxy/gromacs.git
2016-09-16 Berk HessMerge branch release-2016
2016-09-16 Berk HessMade distance restraints work with threads and DD
2016-09-15 Aleksei IupinovMove the PME Ewald coefficients to the PME structure
2016-09-13 Berk HessMoved expanded ensemble history to pointer in t_state
2016-09-13 Roland SchulzTidy: modernize-use-emplace
2016-09-13 Berk HessChange ED and swapstate to pointers in t_state
2016-09-12 Mark AbrahamPreliminary clean up of NVML code
2016-09-12 Berk HessAdd const to thread-MPI functions
2016-09-12 Vedran MiletićDocument wallcycle counters and subcounters
2016-09-12 Teemu MurtolaFix various memory leaks
2016-09-11 Vedran MiletićPrint OpenCL error string instead of error code
2016-09-10 Berk HessRemove continuation from convert_tpr
2016-09-10 Aleksei IupinovFix PME data destructor not being called
2016-09-08 Mark AbrahamMerge branch release-5-1 into release-2016
2016-09-08 Mark AbrahamBumped patch number to prepare for future 5.1.5 release
2016-09-07 Mark AbrahamVersion 5.1.4
2016-09-07 Mark AbrahamRemoved HIS1 from oplsaa and charmm definitions
2016-09-07 Mark AbrahamFix LYN charges in amber03
2016-09-07 Mark AbrahamFix amber03 HIP charges
2016-09-07 Teemu MurtolaClean up CTest test management
2016-09-07 Erik LindahlBump oldest cmake, compiler and CUDA versions required
2016-09-06 Mark AbrahamWork around glibc 2.23 with CUDA
2016-09-06 Berk HessFix bug with conjugate-gradient and OpenMP
2016-09-06 Berk HessConsolidate MD algorithm atom setup
2016-09-05 David van der... Merge "Merge branch release-2016"
2016-09-05 Berk HessRe-enable flexible constraints with DD
2016-09-04 Berk HessMerge branch release-2016
2016-09-03 Berk HessClean up PME flags variable use
2016-09-02 Berk HessMerge branch release-5-1 into release-2016
2016-09-02 Berk HessFix Parrinello-Rahman with nstpcouple>1
2016-08-30 Teemu MurtolaBasic support for transforming KeyValueTrees
2016-08-30 Berk HessMake virial reproducible
2016-08-27 Szilárd PállMake ASAN/TSAN/MSAN build types easier to discover
2016-08-27 Mark AbrahamStop using gmx_fatal in grompp
2016-08-27 Teemu MurtolaSupport KeyValueTree objects in refdata
2016-08-27 Berk HessReduce rounding errors in SETTLE
2016-08-27 Roland SchulzFix build with GMX_USE_TNG=off
2016-08-25 Jochen HubFixed bug in gmx insert-molecules.
2016-08-24 Roland SchulzRemove unnecessary ICC warning suppression
2016-08-24 Berk HessFix Ewald surface+3DC corrections
2016-08-24 Mark AbrahamRemove hacks for outdated BlueGene support
2016-08-24 David van der... Added documentation for shell potentials.
2016-08-24 Berk HessMerge branch release-5-1 into release-2016
2016-08-23 Berk HessRemove variable precision gro writing
2016-08-18 Teemu MurtolaCheck for unused refdata values
2016-08-18 Teemu MurtolaGeneric structured key-value tree for options
2016-08-18 Teemu MurtolaSupport for non-string option value assignment
2016-08-17 Teemu MurtolaBasic support for array-of-structs in options
2016-08-17 Teemu MurtolaGeneralize and simplify option value storage
2016-08-17 Teemu MurtolaGeneralize option section internals
2016-08-17 Teemu MurtolaReimplement subsections in Options
2016-08-17 Berk HessFixed opening of wall table files
2016-08-15 Mark AbrahamMerge branch release-2016
2016-08-15 Mark AbrahamFixes for BG/Q platform files and install guide
2016-08-15 Berk HessReduce FE pair-list memory usage
2016-08-12 Mark AbrahamBump number to prepare for first patch release
2016-08-10 Berk HessFix deadlock with thread-MPI
2016-08-09 Berk HessFix twin-cutoff for GPU LJ pot-switch
2016-08-05 Erik LindahlFix proper relative tolerance checking in testutils
2016-08-04 Mark AbrahamVersion 2016
2016-08-04 Teemu MurtolaFix/improve doc links in template/README
2016-08-03 David van der... Three new quotes.
2016-08-03 Vedran MiletićUse only legal characters in OpenCL cache filename
2016-08-01 Teemu MurtolaFunction to split delimited strings
2016-07-31 James GrahamAvoid blank line in writing index file
2016-07-31 David van der... Merge "Merge branch release-5-1 into release-2016"...
2016-07-30 Roland SchulzUpdate GCC version for reference build
2016-07-30 Vedran MiletićDocument gmx_cgsort_t and gmx_domdec_sort_t structs
2016-07-29 Mark AbrahamImprove handling of gmock and gcc6
2016-07-29 Mark AbrahamMerge branch release-5-1 into release-2016
2016-07-29 David van der... Fixes incorrect charges in OPLS/AA-L for HISD and HISE
2016-07-28 Mark AbrahamAdd toolchain flags for SSE2 compilation
2016-07-23 Roland SchulzMerge release-2016 into master
2016-07-21 Mark AbrahamBumped patch number to prepare for future 5.1.4 release
2016-07-18 Roland SchulzFix non-parallel build
2016-07-14 Mark AbrahamFix issues with using int for number of steps
2016-07-14 Teemu MurtolaUse newer gcc for coverage
2016-07-13 Mark AbrahamVersion 5.1.3
2016-07-12 Mark AbrahamMerge branch release-2016
2016-07-12 Mark AbrahamFix trr magic number reading
2016-07-11 Mark AbrahamFix gmx mdrun -membed -ntmpi -1
2016-07-11 Erik LindahlFix membed with partial revert of 29943f
2016-07-11 Michael ShirtsFix for incorrectly setting expanded ensemble when...
2016-07-11 Mark AbrahamFix regressiontest download md5sum
2016-07-09 Mark AbrahamFirst 2016 release candidate
2016-07-09 Erik LindahlHardware detection clean-up and pre/post-processing
2016-07-09 Erik LindahlPrevent fragile use cases of checkpoint appending
2016-07-08 Erik LindahlUpdate affinity checking for Intel compiler
2016-07-08 Vedran MiletićPrint working dir before command line
2016-07-08 David van der... Merge "Merge branch release-5-1 into release-2016"...
2016-07-08 Jochen HubUpdated g_wham for the new pull setup
2016-07-08 Mark AbrahamMerge branch release-5-1 into release-2016
2016-07-08 David van der... Introduce fatal error for too few frames in gmx dos.
2016-07-08 Mark AbrahamSimplify SIMD compiler flag construction
2016-07-08 Erik LindahlAdd detection for ARMv7 cycle counter support
2016-07-08 Erik LindahlWork around compiler issue with random test
2016-07-08 Szilárd PállAdd PDF metadata to the manual
2016-07-08 Szilárd PállUser guide clarifications
2016-07-07 Erik LindahlReduce hwloc & cpuid test requirements
2016-07-07 Mark AbrahamMove consistency check for number of threads
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