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alexxy/gromacs.git
2013-01-24
Szilard Pall
added back cuda.h includes to fix missing CUDA_VERSION
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2013-01-22
Mark Abraham
Merge "Illegal acceleration defaulted to QPX" into...
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2013-01-22
Mark Abraham
Merge "Re-licenced FindGROMACS.cmake (was written by...
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2013-01-22
Roland Schulz
Illegal acceleration defaulted to QPX
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2013-01-22
Mark Abraham
Merge "Fix TOUPPER usage" into release-4-6
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2013-01-22
Mark Abraham
Merge "Updated html manual to 4.6" into release-4-6
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2013-01-22
Mark Abraham
Merge "added missing cleanup of some nbnxn_cuda data...
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2013-01-22
Roland Schulz
Fix TOUPPER usage
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2013-01-22
Roland Schulz
Updated html manual to 4.6
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2013-01-21
Christoph Junghans
Merge "Set version info for 4.6.x release series" into...
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2013-01-19
Christoph Junghans
Re-licenced FindGROMACS.cmake (was written by me)
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2013-01-19
Roland Schulz
Fix AVX double compile error
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2013-01-18
Mark Abraham
Set version info for 4.6.x release series
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2013-01-18
Mark Abraham
New major release: 4.6
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2013-01-18
Michael Shirts
Addendum for expanded ensemble options plus formatting...
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2013-01-18
Roland Schulz
Merge release-4-5-patches into release-4-6
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2013-01-18
Roland Schulz
Fix typo
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2013-01-18
Roland Schulz
Code beautification with uncrustify
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2013-01-18
Roland Schulz
Add colon after macro to help uncrustify
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2013-01-18
Berk Hess
thread affinity now uses some topology information
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2013-01-18
Mark Abraham
Fixing copyright issues and code contributors
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2013-01-18
Erik Lindahl
Merge "remove unnecessary cmake messages" into release-4-6
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2013-01-18
Erik Lindahl
Merge "fix OpenMP detection on Mac OS broken by a6fee0b...
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2013-01-18
Roland Schulz
Fix reading of g96 title
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2013-01-18
Szilard Pall
remove unnecessary cmake messages
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2013-01-18
Szilárd Páll
fix OpenMP detection on Mac OS broken by a6fee0b
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2013-01-17
Mark Abraham
Updating the shell completion files
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2013-01-17
Szilárd Páll
added missing cleanup of some nbnxn_cuda data
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2013-01-17
Mark Abraham
Gromacs install guide updates.
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2013-01-17
Mark Abraham
Merge "Remove unnecessary ICC flags affecting performan...
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2013-01-17
Mark Abraham
Merge "improved CUDA kernel performance by pre-loading...
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2013-01-17
Christoph Junghans
Merge "Added note about make_edi and flooding in ED...
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2013-01-17
Christoph Junghans
Merge "use the compiler version provided by CMake ...
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2013-01-17
Roland Schulz
Merge "Merge branch 'release-4-5-patches' into release...
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2013-01-17
Szilárd Páll
Merge changes I930b316c,Iea4283e0,I103648f8 into releas...
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2013-01-17
Roland Schulz
Remove unnecessary ICC flags affecting performance
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2013-01-17
Mark Abraham
Merge "Fix trjconv -sub with .trr files" into release...
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2013-01-17
Mark Abraham
BlueGene/Q installation notes
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2013-01-17
Mark Abraham
Merge branch 'release-4-5-patches' into release-4-6
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2013-01-17
Christoph Junghans
Merge "note the reason for auto-disabling GPU support...
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2013-01-17
Mark Abraham
Merge "Added mdp option 'calc-lambda-neighbors'." into...
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2013-01-17
Roland Schulz
Merge "clarify wording of GPU driver-related notes...
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2013-01-17
Roland Schulz
Merge "Added check for valid wall_atomtype in .mdp...
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2013-01-17
Mark Abraham
Fix trjconv -sub with .trr files
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2013-01-17
Berk Hess
fixed SD+BD integration slowing down with OpenMP threads
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2013-01-17
Roland Schulz
Run regressiontests from build
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2013-01-17
Berk Hess
improved CUDA kernel performance by pre-loading cj
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2013-01-17
Sander Pronk
Added mdp option 'calc-lambda-neighbors'.
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2013-01-17
Sander Pronk
Fixes to free energy code, output & g_bar compatibility.
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2013-01-17
Carsten Kutzner
Added note about make_edi and flooding in ED paragraph
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2013-01-17
Szilárd Páll
use the compiler version provided by CMake >=2.8.9
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2013-01-17
Szilárd Páll
note the reason for auto-disabling GPU support in CMake
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2013-01-17
Szilárd Páll
clarify wording of GPU driver-related notes
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2013-01-17
Mark Abraham
Finally move OpenMM to contrib
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2013-01-17
Roland Schulz
Fix confusing gmx_header_config.h include
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2013-01-17
Szilard Pall
don't use polling with new driver
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2013-01-17
Christoph Junghans
clean up fortran name mangling
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2013-01-17
Berk Hess
fixed nbnxn hybrid mode with OpenMP
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2013-01-17
Berk Hess
made PME load balancing + DD DLB more efficient
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2013-01-16
Carsten Kutzner
Made g_tune_pme work correctly again with thread-MPI...
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2013-01-16
Roland Schulz
Don't cache ${FFTW}_HAVE_(SIMD|AVX)
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2013-01-16
Erik Lindahl
Fixed GB interactions for release-4-6
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2013-01-16
Berk Hess
split off pick_nbnxn_resource from nbnxn_pick_nbnxn
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2013-01-16
Mark Abraham
Quiet stderr output, particularly for multi-simulations
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2013-01-16
Michael Shirts
fixes issues with pressure control and infrequent evalu...
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2013-01-16
Christoph Junghans
Remove debug statment
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2013-01-15
Mark Abraham
Added check for valid wall_atomtype in .mdp
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2013-01-15
Roland Schulz
Fix missing replacement/typo
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2013-01-15
Mark Abraham
Merge "Hid nbnxn kernel names behind a lookup function...
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2013-01-15
Christoph Junghans
Merge "Added fatal error for constraints + L-BFGS minim...
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2013-01-15
Christoph Junghans
Merge "disable OpenMP with all OS X gcc 4.2-based compi...
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2013-01-15
Sander Pronk
Merge "Continuation of documentation for expanded ensem...
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2013-01-15
Mark Abraham
Velocity-verlet integrators and v-rescale are broken
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2013-01-15
Michael Shirts
Continuation of documentation for expanded ensemble.
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2013-01-15
Szilárd Páll
disable OpenMP with all OS X gcc 4.2-based compilers
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2013-01-14
Mark Abraham
Added fatal error for constraints + L-BFGS minimizer
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2013-01-14
Mark Abraham
Hid nbnxn kernel names behind a lookup function
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2013-01-14
Carsten Kutzner
Essential dynamics output file now in .xvg format
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2013-01-14
David van der...
Merge "Fixing trjconv -sub" into release-4-5-patches
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2013-01-14
David van der...
Merge "Noting that and why gmxdump -s -sys is broken...
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2013-01-13
Roland Schulz
Merge "Fixes for md-vv and rerun" into release-4-6
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2013-01-13
Roland Schulz
Merge "fixed resetting states with parallel Verlet...
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2013-01-13
Mark Abraham
Updated code checks with distance restraints
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2013-01-13
Mark Abraham
Fixing trjconv -sub
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2013-01-13
Roland Schulz
Proper fix for copyrite cuda dependence
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2013-01-13
Michael Shirts
Fixes for md-vv and rerun
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2013-01-13
Berk Hess
fixed resetting states with parallel Verlet scheme
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2013-01-13
Christoph Junghans
Merge "Remove unused bfunc.h." into release-4-6
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2013-01-13
Mark Abraham
Noting that and why gmxdump -s -sys is broken
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2013-01-13
Christoph Junghans
Merge "Clarified some comments & warnings about thread...
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2013-01-13
Christoph Junghans
Merge "Manage BlueGene/Q configuration" into release-4-6
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2013-01-13
Christoph Junghans
Merge "Re-organize BlueGene toolchain files" into relea...
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2013-01-13
Christoph Junghans
Merge "Changed defaults for building shared libraries...
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2013-01-13
Mark Abraham
Clarified some comments & warnings about thread pinning
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2013-01-13
Roland Schulz
Merge "prepared the nbnxn code for non-x86 SIMD" into...
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2013-01-13
Mark Abraham
Manage BlueGene/Q configuration
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2013-01-13
Mark Abraham
Re-organize BlueGene toolchain files
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2013-01-13
Mark Abraham
Changed defaults for building shared libraries
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2013-01-13
Mark Abraham
Merge "Added basic CPU topology information to cpuid...
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2013-01-13
Teemu Murtola
Remove unused bfunc.h.
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