alexxy/gromacs.git
2014-08-24 Berk HessInitialize unused velocity constraint components
2014-08-23 Teemu MurtolaBackport of 'Remove unused figures from share/html/'
2014-08-23 Mark AbrahamGeneralize markdown configuration machinery
2014-08-23 Mark AbrahamUnify documentation for webpage build
2014-08-22 Mark AbrahamFix zlib usage with TNG
2014-08-21 Magnus LundborgFixed TNG memory alignment problem and reset pointers.
2014-08-20 Erik LindahlAdd _GNU_SOURCE=1 to find clone() with PGI
2014-08-20 Roland SchulzChange error to warning for missing OMP_NUM_THREADS
2014-08-20 Erik LindahlFix matrix pointer dereference bug in update.c
2014-08-20 Erik LindahlEnable SIMD register calling convention with gmx_simdcall
2014-08-20 Erik LindahlAdd cycle counters for 64-bit ARM
2014-08-20 Erik LindahlShorten plugin configuration message
2014-08-18 Roland SchulzAdd Intel command line warning
2014-08-17 Erik LindahlFix Portland compiler warnings
2014-08-17 Berk HessHalved the cost of the pull communication
2014-08-17 Roland SchulzDon't build tests until they are run
2014-08-16 Mark AbrahamFix gmx tune_pme with LJ-PME
2014-08-16 Mark AbrahamFix wallcycle counting with md-vv, sd and sd2
2014-08-16 Teemu MurtolaDisable analysisdata generic tests if not compilable
2014-08-14 Berk HessCorrected SIMD math overflow documentation
2014-08-10 Erik LindahlMake internal BLAS/LAPACK messages less noisy
2014-08-10 Erik LindahlImprove Gromacs portability
2014-08-10 Erik LindahlReplace __LP64__ with check for pointer size
2014-08-10 Berk HessAdded checks for TPI + Verlet scheme
2014-08-10 Roland SchulzCheck MD5sum for regressiontest
2014-08-10 Roland SchulzMerge release-4-6 into release-5-0
2014-08-07 Erik LindahlFix portability issue with ArrayRef initializer overloading
2014-08-07 Erik LindahlChanged names of test files to avoid Fujitsu compiler bug
2014-08-05 Berk HessFix hang with LJ-PME and empty domains
2014-08-05 Roland SchulzWorkaround for ICC 14
2014-08-04 Teemu MurtolaVerify MD5 sum for FFTW download
2014-08-02 Berk HessFixed PME bug with high OpenMP thread count
2014-08-01 Erik LindahlAdded tests for denormal and underflow for simd exp()
2014-07-31 Berk HessAvoid division by 0 in nbnxn_search
2014-07-28 Christian WennbergFix overflow in LJ-PME nbnxn kernels
2014-07-28 Roland SchulzFix build of binary package
2014-07-28 Roland SchulzAdd unit test for random/Threefry
2014-07-28 Roland SchulzRemove Random123/features
2014-07-27 Erik LindahlFix selection of xtc groups not starting at index 0
2014-07-25 Roland SchulzWorkaround for ICC 14 bug
2014-07-24 Roland SchulzFix Cygwin+Shared-Libs+FFTW
2014-07-23 Roland SchulzAdd support for int64 in refdata
2014-07-22 Roland SchulzFix GMX_BUILD_OWN_FFTW for Cygwin
2014-07-21 Roland SchulzFix GMX_NONBONDED_NUM_THREADS!=GMX_PAIRSEARCH_NUM_THREADS
2014-07-16 Teemu MurtolaFix HTML help and man pages for commands with dashes
2014-07-13 Erik LindahlAvoid clang/32 optimization affecting IEEE endian detection
2014-07-11 Erik LindahlMake AVX2 check more robust
2014-07-11 Teemu MurtolaFix HTML links that contain file extensions
2014-07-10 Roland SchulzFix xml2 link check rerun
2014-07-09 Mark AbrahamName the tarball how we like it
2014-07-09 Mark AbrahamQuieten repeated cmake runs
2014-07-09 Roland SchulzFix Cygwin build
2014-07-08 Erik LindahlMake IEEE754 check more robust
2014-07-08 Teemu MurtolaMake selections ignore \r in input
2014-07-07 Mark AbrahamFix tarball and install, particularly for INSTALL
2014-07-07 Mark AbrahamVersion bump after 4.6.6 release
2014-07-05 Magnus LundborgFix bug causing reading next frame not to stop.
2014-07-05 Magnus LundborgFix tng_num_frame_sets_get() with no frame sets.
2014-07-05 Teemu MurtolaReinstantiate unsorted index group check
2014-07-05 Roland SchulzAdd running tests to install-guide
2014-07-05 Teemu MurtolaUpdate some installation-related docs
2014-07-01 Teemu MurtolaAdjust include directory order for some corner cases
2014-07-01 Mark AbrahamFix GMock to work on MSVC
2014-06-29 Mark AbrahamVersion bump for 5.0
2014-06-29 Mark AbrahamAdd forgotten licenses to COPYING
2014-06-29 Mark AbrahamRefer to "mixed" precision in user-facing documentation
2014-06-29 Berk HessTake LJ-PME into account for table spacing
2014-06-29 Erik LindahlFixed free energy with LJ-PME
2014-06-29 Mark AbrahamConvert install guide to markdown
2014-06-29 Mark AbrahamMerge "Merge release-4-6 into release-5-0" into release-5-0
2014-06-29 Berk HessUpdated LJ-PME documentation
2014-06-29 Rossen ApostolovUse cosistent style when referring to force fields.
2014-06-29 Teemu MurtolaRemove some hardcoded selection string buffers
2014-06-29 Roland SchulzMerge release-4-6 into release-5-0
2014-06-29 Roland SchulzFix detection of i386 in tmpi
2014-06-29 Erik LindahlEnable rtp angle/dihedral entries not connected by...
2014-06-29 Michael ShirtsAllow printing potential energies to dhdl.xvg file
2014-06-29 David van der... Fixes #1532, SEGV in g_current.
2014-06-29 Roland SchulzMerge "Merge branch 'release-4-6' into release-5-0...
2014-06-28 Mark AbrahamMerge branch 'release-4-6' into release-5-0
2014-06-28 Roland SchulzFix error for no 64bit file support
2014-06-28 Erik LindahlFixed CMAP generation for alanine dipeptide special...
2014-06-28 Magnus LundborgUpdate TNG build system
2014-06-28 Mark AbrahamUse parallel terminology more consistently
2014-06-28 ngogaDefault SD integrator is now sd1 by Nicu Goga
2014-06-28 Teemu MurtolaRemove overeager selection index group check
2014-06-28 Roland SchulzAnother MacOSX rpath fix
2014-06-27 Roland SchulzMerge release-4-6 into release-5-0
2014-06-27 Erik LindahlAlways set b-state posres, even if identical to a-state
2014-06-27 Erik LindahlUpdate g_density to handle bilayers better
2014-06-27 Erik LindahlFix LJPME Lorentz-Berthelot combination rules
2014-06-27 Rossen ApostolovChanged linking order to make Extrae work.
2014-06-27 Erik LindahlImprove PDB I/O (keep occupancy, b-factor, element)
2014-06-27 Carsten KutznerRemove obsolete pull-geometry option 'position' from...
2014-06-27 Roland SchulzFix Phi Platform file for MPI
2014-06-27 Erik LindahlAvoid warnings about coupling when free_energy=no
2014-06-27 Rossen ApostolovAdded information about dihedral restraints.
2014-06-27 Rossen ApostolovRemove install_manifest.txt during make clean.
2014-06-26 Roland SchulzFix Visual Studio Project build
2014-06-26 Mark AbrahamMerge "Merge release-4-6 into release-5-0" into release-5-0
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