alexxy/gromacs.git
2016-09-02 Berk HessMerge branch release-5-1 into release-2016
2016-09-02 Berk HessFix Parrinello-Rahman with nstpcouple>1
2016-08-30 Berk HessMake virial reproducible
2016-08-27 Mark AbrahamStop using gmx_fatal in grompp
2016-08-27 Roland SchulzFix build with GMX_USE_TNG=off
2016-08-25 Jochen HubFixed bug in gmx insert-molecules.
2016-08-24 Berk HessFix Ewald surface+3DC corrections
2016-08-24 Berk HessMerge branch release-5-1 into release-2016
2016-08-23 Berk HessRemove variable precision gro writing
2016-08-17 Berk HessFixed opening of wall table files
2016-08-15 Mark AbrahamFixes for BG/Q platform files and install guide
2016-08-15 Berk HessReduce FE pair-list memory usage
2016-08-12 Mark AbrahamBump number to prepare for first patch release
2016-08-10 Berk HessFix deadlock with thread-MPI
2016-08-09 Berk HessFix twin-cutoff for GPU LJ pot-switch
2016-08-04 Mark AbrahamVersion 2016
2016-08-04 Teemu MurtolaFix/improve doc links in template/README
2016-08-03 David van der... Three new quotes.
2016-08-03 Vedran MiletićUse only legal characters in OpenCL cache filename
2016-07-31 David van der... Merge "Merge branch release-5-1 into release-2016"...
2016-07-30 Vedran MiletićDocument gmx_cgsort_t and gmx_domdec_sort_t structs
2016-07-29 Mark AbrahamImprove handling of gmock and gcc6
2016-07-29 Mark AbrahamMerge branch release-5-1 into release-2016
2016-07-29 David van der... Fixes incorrect charges in OPLS/AA-L for HISD and HISE
2016-07-28 Mark AbrahamAdd toolchain flags for SSE2 compilation
2016-07-21 Mark AbrahamBumped patch number to prepare for future 5.1.4 release
2016-07-14 Mark AbrahamFix issues with using int for number of steps
2016-07-13 Mark AbrahamVersion 5.1.3
2016-07-12 Mark AbrahamFix trr magic number reading
2016-07-11 Mark AbrahamFix gmx mdrun -membed -ntmpi -1
2016-07-11 Erik LindahlFix membed with partial revert of 29943f
2016-07-11 Michael ShirtsFix for incorrectly setting expanded ensemble when...
2016-07-11 Mark AbrahamFix regressiontest download md5sum
2016-07-09 Mark AbrahamFirst 2016 release candidate
2016-07-09 Erik LindahlHardware detection clean-up and pre/post-processing
2016-07-09 Erik LindahlPrevent fragile use cases of checkpoint appending
2016-07-08 Erik LindahlUpdate affinity checking for Intel compiler
2016-07-08 Vedran MiletićPrint working dir before command line
2016-07-08 David van der... Merge "Merge branch release-5-1 into release-2016"...
2016-07-08 Jochen HubUpdated g_wham for the new pull setup
2016-07-08 Mark AbrahamMerge branch release-5-1 into release-2016
2016-07-08 David van der... Introduce fatal error for too few frames in gmx dos.
2016-07-08 Mark AbrahamSimplify SIMD compiler flag construction
2016-07-08 Erik LindahlAdd detection for ARMv7 cycle counter support
2016-07-08 Erik LindahlWork around compiler issue with random test
2016-07-08 Szilárd PállAdd PDF metadata to the manual
2016-07-08 Szilárd PállUser guide clarifications
2016-07-07 Erik LindahlReduce hwloc & cpuid test requirements
2016-07-07 Mark AbrahamMove consistency check for number of threads
2016-07-07 Teemu MurtolaChange handling for missing releng docs
2016-07-07 Szilárd PállAdd user guide info on CUDA application clocks
2016-07-07 Mark AbrahamFix build if libcuda is found but nvcc is not
2016-07-07 Berk HessRelax pull PBC check
2016-07-05 Szilárd PállDocument GMX_GPU_APPLICATION_CLOCKS
2016-07-05 Berk HessAdd checks for too much memory in g_nmeig
2016-07-04 Mark AbrahamFixes for Power7 big-endian
2016-07-04 Szilárd PállDisable NVIDIA JIT cache with OpenCL
2016-07-03 Berk HessAdd grompp check for pull group
2016-07-01 Mark AbrahamFix use of _POSIX_THREAD*
2016-06-30 Mark AbrahamMerge branch release-5-1 into release-2016
2016-06-29 Mark AbrahamRefactor sysconf checking
2016-06-29 Mark AbrahamWork around glibc 2.23 with CUDA
2016-06-28 Berk HessProperly reset CUDA application clocks
2016-06-28 Mark AbrahamUpdate to include a gcc 6.1 configuration
2016-06-28 Mark AbrahamFix SIMD configuration management
2016-06-27 Mark AbrahamRemoved unnecessary inter-simulation signalling
2016-06-27 Berk HessUse sysconf(_SC_NPROCESSORS_ONLN)
2016-06-27 Mark AbrahamMerge branch release-5-1 into release-2016
2016-06-27 David van der... Made gmx dos work again.
2016-06-26 Berk HessFix vsite bug with MPI+OpenMP
2016-06-24 Berk HessFix Verlet buffer calculation with nstlist=1
2016-06-23 Berk HessMore accurate GPU list splitting
2016-06-23 Mark AbrahamAllow use of external lmfit package
2016-06-23 Mark AbrahamPrevent use of mdrun -maxh -multi
2016-06-22 Berk HessUpdated OpenCLTODOList.txt
2016-06-22 Mark AbrahamFix configuration-time cpuinfo code
2016-06-22 David van der... Removed spurious r_ij in force for Morse potential...
2016-06-22 Mark AbrahamMerge branch release-5-1 into release-2016
2016-06-22 Berk HessAdd nbnxn pair-list rebalancing
2016-06-22 Berk HessRemove OpenMP overhead at high parallelization
2016-06-22 Berk HessCorrect GPU pair estimate for list splitting
2016-06-22 Mark AbrahamAdjust and document C++11 compiler tests
2016-06-21 Vedran MiletićPrevent writing to unallocated memory in mk_specbonds
2016-06-21 Berk HessFix bug with fbposres+MPI+OpenMP
2016-06-20 Mark AbrahamUpdate pre-submit matrix contents
2016-06-19 Berk HessRemove warnings on checkpoint mismatch
2016-06-19 Mark AbrahamImprove docs for linking stdlibc++ needed by icc
2016-06-17 Berk HessRemove std::thread::hardware_concurrency()
2016-06-17 Vedran MiletićReport the filename and the line number on failure
2016-06-17 Mark AbrahamMerge branch release-5-1 into release-2016
2016-06-17 Mark AbrahamFix multi-sim + DD + simple distance restraints
2016-06-14 Berk HessFix OpenCL error with empty domains
2016-06-14 Szilárd PállFix CUDA build with multiple compilation units
2016-06-13 Berk HessHandle constraint errors with EM
2016-06-10 Mark AbrahamFind python for docs build quietly
2016-06-08 Erik LindahlDisable static libcudart on OS X
2016-06-08 Mark AbrahamMerge branch release-5-1 into release-2016
2016-06-07 Mark AbrahamRe-add support for linking against external TinyXML-2
2016-06-07 Mark AbrahamUpdates to documentation
2016-06-07 Semen YesylevskyyAdded manual section about embedding proteins to membranes.
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