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2019-10-10	Szilárd Páll	Add management for coordinates copy events into StatePropaga...	commit \| commitdiff \| tree
2019-10-09	Szilárd Páll	Add GPU event to mark that coordinate update is done	commit \| commitdiff \| tree
2019-09-30	Szilárd Páll	Move PME GPU program building later	commit \| commitdiff \| tree
2019-09-30	Szilárd Páll	Make the wait on PME GPU results conditional	commit \| commitdiff \| tree
2019-09-27	Szilárd Páll	Switch GPU update off by default	commit \| commitdiff \| tree
2019-09-25	Szilárd Páll	Merge remote-tracking branch 'origin/release-2019'	commit \| commitdiff \| tree
2019-09-18	Szilárd Páll	Set up workload data structures	commit \| commitdiff \| tree
2019-09-16	Szilárd Páll	Refactor GPU buf ops-related launches in do_force()	commit \| commitdiff \| tree
2019-09-16	Szilárd Páll	Eliminate unnecessary GPU stream dependency call	commit \| commitdiff \| tree
2019-09-13	Szilárd Páll	Fix GPU X buffer ops with empty domain	commit \| commitdiff \| tree
2019-09-12	Szilárd Páll	Reorganize on-GPU PME force reduction flag handling	commit \| commitdiff \| tree
2019-09-11	Szilárd Páll	Fix gpucomm matrix	commit \| commitdiff \| tree
2019-09-10	Szilárd Páll	Eliminate raw force flags in do_force_lowlevel()	commit \| commitdiff \| tree
2019-09-10	Szilárd Páll	Use thread-MPI in the gpucomm matrix	commit \| commitdiff \| tree
2019-09-09	Szilárd Páll	Assert the types of OpenCL kernels arguments	commit \| commitdiff \| tree
2019-09-09	Szilárd Páll	Pass gmx::ForceFlags to CPU nbnxm dispatch code	commit \| commitdiff \| tree
2019-09-09	Szilárd Páll	Pass the new gmx::ForceFlags to the nbnxm module	commit \| commitdiff \| tree
2019-09-06	Szilárd Páll	Add gpuupdate and gpucomm OnDemand tokens	commit \| commitdiff \| tree
2019-09-04	Szilárd Páll	Bump ARM HPC toolchain in post-submit to v19.3	commit \| commitdiff \| tree
2019-09-04	Szilárd Páll	Add back a clang-tidy exception	commit \| commitdiff \| tree
2019-09-04	Szilárd Páll	Centralize more MD/force shedule flags	commit \| commitdiff \| tree
2019-08-28	Szilárd Páll	Add clang-tidy nightly test with SIMD + OpenCL	commit \| commitdiff \| tree
2019-08-28	Szilárd Páll	Move nonbonded GPU wait timing into the GPU module	commit \| commitdiff \| tree
2019-08-25	Szilárd Páll	clang-tidy 8 fixes for the GPU host code-path	commit \| commitdiff \| tree
2019-08-25	Szilárd Páll	Further fixes for clang-tidy clang version 8	commit \| commitdiff \| tree
2019-08-23	Szilárd Páll	Fix clang-tidy warnings in the OpenCL build	commit \| commitdiff \| tree
2019-08-23	Szilárd Páll	Fix clang tidy warnings in CUDA build	commit \| commitdiff \| tree
2019-08-19	Szilárd Páll	Bump clang-cuda post-submit compiler/CUDA version	commit \| commitdiff \| tree
2019-08-19	Szilárd Páll	Switch to ARM HPC toolchain v19.2 in post-submit	commit \| commitdiff \| tree
2019-08-19	Szilárd Páll	Work around clang CUDA device code codegen bug	commit \| commitdiff \| tree
2019-08-16	Szilárd Páll	Fix sim_util.cpp copyright header	commit \| commitdiff \| tree
2019-08-15	Szilárd Páll	Fix OpenCL gather reduction	commit \| commitdiff \| tree
2019-08-12	Szilárd Páll	Fix hwloc find package naming and quietness issues	commit \| commitdiff \| tree
2019-07-31	Szilárd Páll	Store wcycle pointer in nonbonded_verlet_t	commit \| commitdiff \| tree
2019-07-31	Szilárd Páll	Fixes for F buffer ops change	commit \| commitdiff \| tree
2019-07-31	Szilárd Páll	Move cycle counting into the GPU bonded module	commit \| commitdiff \| tree
2019-07-31	Szilárd Páll	Report when development feature flags are used	commit \| commitdiff \| tree
2019-07-31	Szilárd Páll	Move end of step GPU task launches to a function	commit \| commitdiff \| tree
2019-07-25	Szilárd Páll	Only stop the CUDA profiler if there are devices	commit \| commitdiff \| tree
2019-07-22	Szilárd Páll	Conditionally pin GPU-related grid data	commit \| commitdiff \| tree
2019-07-11	Szilárd Páll	Use HostVector for Grid/GridSet data need on-GPU	commit \| commitdiff \| tree
2019-07-08	Szilárd Páll	Eliminate a use of double precision in the GPU bonded...	commit \| commitdiff \| tree
2019-07-04	Szilárd Páll	Bump latest CUDA + gcc in the pre-submit matrix	commit \| commitdiff \| tree
2019-07-04	Szilárd Páll	Fix a -Wformat-truncation warning in tng	commit \| commitdiff \| tree
2019-07-01	Szilárd Páll	Refactor tracking of GPU short-range work/skipping	commit \| commitdiff \| tree
2019-06-30	Szilárd Páll	Create dedicated subcounter for nonbonded FEP	commit \| commitdiff \| tree
2019-06-28	Szilárd Páll	Separate CPU NB kernel and buffer clearing subcounters	commit \| commitdiff \| tree
2019-06-27	Szilárd Páll	Remove already resolved post-submit matrix TODO	commit \| commitdiff \| tree
2019-06-24	Szilárd Páll	Only use AVX512 in own-FFTW if GROMACS also uses it	commit \| commitdiff \| tree
2019-06-19	Szilárd Páll	Disable PME GPU on Apple OpenCL	commit \| commitdiff \| tree
2019-05-29	Szilárd Páll	Template x buffer ops call on whether GPU is used	commit \| commitdiff \| tree
2019-05-23	Szilárd Páll	Fix mulitple link refs in dev-manual	commit \| commitdiff \| tree
2019-05-20	Szilárd Páll	Improve X buffer ops kernel	commit \| commitdiff \| tree
2019-04-25	Szilárd Páll	Fix clang warning about NULL use	commit \| commitdiff \| tree
2019-04-25	Szilárd Páll	Avoid using AtomLocality::Count as a valid value	commit \| commitdiff \| tree
2019-04-24	Szilárd Páll	Fix CUDA fallback shmem gather reduction	commit \| commitdiff \| tree
2019-04-18	Szilárd Páll	Fix warnings & consolidate declarations	commit \| commitdiff \| tree
2019-04-16	Szilárd Páll	Move functions operating on enerdata out of force.cpp	commit \| commitdiff \| tree
2019-04-16	Szilárd Páll	Remove "coarse load balancing vars" from forcerec	commit \| commitdiff \| tree
2019-04-16	Szilárd Páll	Group scheme related cleanup	commit \| commitdiff \| tree
2019-04-16	Szilárd Páll	Remove Group scheme neighbor search wrapper	commit \| commitdiff \| tree
2019-04-15	Szilárd Páll	Add user guide note on AVX512 throttle in GPU runs	commit \| commitdiff \| tree
2019-04-05	Szilárd Páll	Revert "Temporarily disable ARM HPC compiler in post...	commit \| commitdiff \| tree
2019-04-05	Szilárd Páll	Revert "Temporarily disable ARM HPC compiler in post...	commit \| commitdiff \| tree
2019-04-02	Szilárd Páll	Temporarily disable ARM HPC compiler in post-submit	commit \| commitdiff \| tree
2019-04-02	Szilárd Páll	Temporarily disable ARM HPC compiler in post-submit	commit \| commitdiff \| tree
2019-03-28	Szilárd Páll	Better document GMX_OPENMP_MAX_THREADS	commit \| commitdiff \| tree
2019-03-26	Szilárd Páll	Skip PBC calculation when there are no listed forces	commit \| commitdiff \| tree
2019-03-26	Szilárd Páll	do_force_cutsVERLET cleanup	commit \| commitdiff \| tree
2019-03-21	Szilárd Páll	Reorder PBC setup in do_force_lowlevel	commit \| commitdiff \| tree
2019-03-13	Szilárd Páll	Reorganize search-time code in do_force_cutsVERLET	commit \| commitdiff \| tree
2019-03-13	Szilárd Páll	Add haveGpuBondedWork flag to PpForceWorkload	commit \| commitdiff \| tree
2019-03-13	Szilárd Páll	Start modularizing force workload setup	commit \| commitdiff \| tree
2019-03-05	Szilárd Páll	Relax OpenCL gather kernel barrier on AMD	commit \| commitdiff \| tree
2019-03-02	Szilárd Páll	Encapsulate force output setup in do_force_*	commit \| commitdiff \| tree
2019-03-01	Szilárd Páll	Clarify force buffer setup code in do_force	commit \| commitdiff \| tree
2019-02-19	Szilárd Páll	Disable instruction fusion on Power8	commit \| commitdiff \| tree
2019-02-17	Szilárd Páll	Improve GPU target compatibility error message	commit \| commitdiff \| tree
2019-02-15	Szilárd Páll	Extend GpuEventSynchronizer to allow on-device sync	commit \| commitdiff \| tree
2019-02-15	Szilárd Páll	Extend performance considerations on bonded offload	commit \| commitdiff \| tree
2019-02-13	Szilárd Páll	Disable instruction fusion on Power8	commit \| commitdiff \| tree
2019-02-13	Szilárd Páll	Minor refactoring in mdrunnner	commit \| commitdiff \| tree
2019-02-12	Szilárd Páll	Minor refactor of gpuid / task mapping parsing	commit \| commitdiff \| tree
2019-02-07	Szilárd Páll	Require a 64-bit platform for OpenCL	commit \| commitdiff \| tree
2019-01-30	Szilárd Páll	Fix double-increment of GPU NB launch subcounter	commit \| commitdiff \| tree
2019-01-21	Szilárd Páll	Add CUDA CC 7.5 (Turing) support with nvcc	commit \| commitdiff \| tree
2019-01-04	Szilárd Páll	Fix formatting warning	commit \| commitdiff \| tree
2019-01-02	Szilárd Páll	Fix clang 6 warning	commit \| commitdiff \| tree
2019-01-02	Szilárd Páll	Do not whitelist the use of OpenCL 1.1 API	commit \| commitdiff \| tree
2018-12-31	Szilárd Páll	Fix release notes typo	commit \| commitdiff \| tree
2018-12-31	Szilárd Páll	Add CUDA CC 7.5 (Turing) support with nvcc	commit \| commitdiff \| tree
2018-12-27	Szilárd Páll	Use std::swap in LINCS	commit \| commitdiff \| tree
2018-12-22	Szilárd Páll	Runtime check of device OpenCL support	commit \| commitdiff \| tree
2018-12-21	Szilárd Páll	Make jenkins own-fftw verify use local tarball	commit \| commitdiff \| tree
2018-12-20	Szilárd Páll	Fix CUDA compiled target-device compatibility check	commit \| commitdiff \| tree
2018-12-20	Szilárd Páll	Correct CUDA compatibility check	commit \| commitdiff \| tree
2018-12-20	Szilárd Páll	Merge "Merge branch release-2018 into release-2019...	commit \| commitdiff \| tree
2018-12-18	Szilárd Páll	Merge release-2019 branch into master	commit \| commitdiff \| tree
2018-12-17	Szilárd Páll	Fix GMX_BUILD_OWN_FFTW_URL CMake cache entry type	commit \| commitdiff \| tree
2018-12-14	Szilárd Páll	Enable ARMPL in the armclang build	commit \| commitdiff \| tree
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