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2020-02-05	Paul Bauer	Use more MDLogger in preprocessing	commit \| commitdiff \| tree
2020-02-05	Pascal Merz	Minor improvements to vcm.cpp	commit \| commitdiff \| tree
2020-02-05	Pascal Merz	Merge VV implementations of ComputeGlobalsElement	commit \| commitdiff \| tree
2020-02-03	Artem Zhmurov	Enable GPU update for supported cases of FEP	commit \| commitdiff \| tree
2020-01-31	Paul Bauer	Use MDLogger in grompp	commit \| commitdiff \| tree
2020-01-31	Szilárd Páll	Eliminate the legacyFlags manipulation in do_force()	commit \| commitdiff \| tree
2020-01-31	Christian Blau	Documentation fix for local atom set data	commit \| commitdiff \| tree
2020-01-31	Pascal Merz	StatePropagatorData: Make const box getters const functions	commit \| commitdiff \| tree
2020-01-30	Artem Zhmurov	Cleaning booleans in NBNXM in OpenCL build	commit \| commitdiff \| tree
2020-01-29	Szilárd Páll	Small improvement in OpenCL error handling	commit \| commitdiff \| tree
2020-01-29	Artem Zhmurov	Split and move the checkDeviceBuffer(...) function...	commit \| commitdiff \| tree
2020-01-29	Artem Zhmurov	Remove the rest of the device coordinates management...	commit \| commitdiff \| tree
2020-01-28	Paul Bauer	Merge branch origin/release-2020 into master	commit \| commitdiff \| tree
2020-01-27	Mark Abraham	Update some nbnxm kernel constants to constexpr	commit \| commitdiff \| tree
2020-01-24	Paul Bauer	Use utf-8 for python file reading	commit \| commitdiff \| tree
2020-01-23	Berk Hess	Fix DD rank count prime check	commit \| commitdiff \| tree
2020-01-23	Artem Zhmurov	Fix a couple of commas in cool quotes	commit \| commitdiff \| tree
2020-01-23	Gaurav Garg	Fix PME checks in GPU update assignment decision	commit \| commitdiff \| tree
2020-01-21	Paul Bauer	Fix documentation error with doxygen >1.8.16	commit \| commitdiff \| tree
2020-01-20	Berk Hess	Use ArrayRef(WithPadding) in constraint code	commit \| commitdiff \| tree
2020-01-17	Paul Bauer	Actually fix Gitlab doc build	commit \| commitdiff \| tree
2020-01-16	Mark Abraham	Make nbnxm headers more self-contained	commit \| commitdiff \| tree
2020-01-16	Szilárd Páll	Fix PME run mode without PME	commit \| commitdiff \| tree
2020-01-16	Paul Bauer	Fix nightly build failure on Gitlab	commit \| commitdiff \| tree
2020-01-15	Christoph Junghans	cmake: install pbc.h for GMX_INSTALL_LEGACY_API	commit \| commitdiff \| tree
2020-01-14	Paul Bauer	Use utf-8 for python file reading	commit \| commitdiff \| tree
2020-01-08	Roland Schulz	Merge release-2019 into release-2020	commit \| commitdiff \| tree
2020-01-07	Paul Bauer	Merge branch origin/release-2020 into master	commit \| commitdiff \| tree
2020-01-07	Erik Lindahl	Write TPR body as opaque XDR data in big-endian format	commit \| commitdiff \| tree
2020-01-07	Paul Bauer	Merge commit d30f2cb6 from release-2020 into master	commit \| commitdiff \| tree
2020-01-01	Paul Bauer	Prepare for 2020.1	commit \| commitdiff \| tree
2020-01-01	Paul Bauer	GROMACS 2020 release	commit \| commitdiff \| tree
2020-01-01	Paul Bauer	Revert "GROMACS 2020 release"	commit \| commitdiff \| tree
2019-12-30	Paul Bauer	Fix build error with wrong name from cached cmake file	commit \| commitdiff \| tree
2019-12-29	Erik Lindahl	Write TPR body as opaque XDR data in big-endian format	commit \| commitdiff \| tree
2019-12-28	M. Eric Irrgang	Resolve CMake ambiguities for gmxapi Python package...	commit \| commitdiff \| tree
2019-12-28	Paul Bauer	Change releng to give information about Gitlab	commit \| commitdiff \| tree
2019-12-28	Paul Bauer	Extend information for GPU update	commit \| commitdiff \| tree
2019-12-28	Mark Abraham	Remove GMX_CYCLECOUNTERS	commit \| commitdiff \| tree
2019-12-28	Paul Bauer	Exclude build-system files from CPack	commit \| commitdiff \| tree
2019-12-28	Paul Bauer	Deprecate support for Armv7	commit \| commitdiff \| tree
2019-12-27	Artem Zhmurov	Add a note to the log file when -update gpu was set...	commit \| commitdiff \| tree
2019-12-27	Paul Bauer	Add copyright check and improve cache usage	commit \| commitdiff \| tree
2019-12-27	Paul Bauer	Merge origin/release-2019 into release-2020	commit \| commitdiff \| tree
2019-12-27	Artem Zhmurov	Clean bad auto-format in decidegpuusage doxygen comments	commit \| commitdiff \| tree
2019-12-23	Paul Bauer	Add files for Gitlab CI	commit \| commitdiff \| tree
2019-12-23	Paul Bauer	Prepare for GROMACS 2019.6	commit \| commitdiff \| tree
2019-12-23	Paul Bauer	GROMACS version 2019.5	commit \| commitdiff \| tree
2019-12-23	Paul Bauer	Revert "Fix that tests intended for multiple ranks...	commit \| commitdiff \| tree
2019-12-20	Paul Bauer	Further updates to Gitlab CI	commit \| commitdiff \| tree
2019-12-20	Paul Bauer	GROMACS 2020 release candidate	commit \| commitdiff \| tree
2019-12-19	Alan Gray	Fix PME tuning issue when PME-PP communications are...	commit \| commitdiff \| tree
2019-12-19	Szilárd Páll	PP-PME load balancing improvements	commit \| commitdiff \| tree
2019-12-18	Szilárd Páll	Allow x D2H to overlap with GPU force compute	commit \| commitdiff \| tree
2019-12-18	Berk Hess	Change grompp decoupling SD warning to note	commit \| commitdiff \| tree
2019-12-18	Paul Bauer	Add ability to set OMP and tMPI thread for ctest	commit \| commitdiff \| tree
2019-12-18	Paul Bauer	Add ability to set OMP and tMPI thread for ctest	commit \| commitdiff \| tree
2019-12-16	Berk Hess	Fix issues in ListOfLists	commit \| commitdiff \| tree
2019-12-15	Paul Bauer	Ignore build host for CI builds	commit \| commitdiff \| tree
2019-12-13	Paul Bauer	Set correct dependency for doc build on gmxapi	commit \| commitdiff \| tree
2019-12-13	Paul Bauer	Fix compiler warning about extra ;	commit \| commitdiff \| tree
2019-12-13	Paul Bauer	Check for using correct hwloc headers and runtime	commit \| commitdiff \| tree
2019-12-11	Artem Zhmurov	Clarify what setting zero to some output mdp options...	commit \| commitdiff \| tree
2019-12-11	M. Eric Irrgang	gmxapi landing page update.	commit \| commitdiff \| tree
2019-12-11	Paul Bauer	Update Gitlab CI to latest fixes	commit \| commitdiff \| tree
2019-12-09	Paul Bauer	Hopefully final gitlab CI fix	commit \| commitdiff \| tree
2019-12-09	Paul Bauer	Move doc build in gitlab to post-test stage	commit \| commitdiff \| tree
2019-12-09	Paul Bauer	Even more gitlab CI fixes	commit \| commitdiff \| tree
2019-12-09	Paul Bauer	More fixes to gitlab CI files	commit \| commitdiff \| tree
2019-12-09	Paul Bauer	Fix error in gitlab CI file	commit \| commitdiff \| tree
2019-12-07	M. Eric Irrgang	Finalize gmxapi 0.1	commit \| commitdiff \| tree
2019-12-06	Mark Abraham	Avoid 386 O3 codegen bug	commit \| commitdiff \| tree
2019-12-06	M. Eric Irrgang	Add notes on MPI with gmxapi Python package.	commit \| commitdiff \| tree
2019-12-06	Artem Zhmurov	Pass array ref instead of casting to basic array in...	commit \| commitdiff \| tree
2019-12-06	Christian Blau	Change arbitrary units to counts in RMSD distance distributi...	commit \| commitdiff \| tree
2019-12-06	Paul Bauer	Add files for gitlab ci testing	commit \| commitdiff \| tree
2019-12-06	Mark Abraham	Provide more feedback when listed forces tests fail	commit \| commitdiff \| tree
2019-12-06	M. Eric Irrgang	gmxapi Python package usage prose.	commit \| commitdiff \| tree
2019-12-06	M. Eric Irrgang	Improve pytest fixtures for directory management.	commit \| commitdiff \| tree
2019-12-05	Christian Blau	Relax cross-correlation test precision	commit \| commitdiff \| tree
2019-12-03	Paul Bauer	Third beta release of GROMACS 2020	commit \| commitdiff \| tree
2019-12-03	Paul Bauer	Revert "Enable GPU update with DD when GPU comm features...	commit \| commitdiff \| tree
2019-12-03	Paul Bauer	Fix nightly build by correctly defining several	commit \| commitdiff \| tree
2019-12-03	Alan Gray	Enable GPU update with DD when GPU comm features are...	commit \| commitdiff \| tree
2019-12-02	Berk Hess	Add check for coupled constraints for CUDA update	commit \| commitdiff \| tree
2019-12-02	Berk Hess	Extract LINCS CUDA helper functions	commit \| commitdiff \| tree
2019-12-01	Paul Bauer	Use DOI for citing in reference manual section	commit \| commitdiff \| tree
2019-12-01	Mark Abraham	Further improve taskassignment exception handling	commit \| commitdiff \| tree
2019-11-30	Paul Bauer	Merge origin/release-2020 into master	commit \| commitdiff \| tree
2019-11-29	Paul Bauer	Fix unaligned access with AVX512	commit \| commitdiff \| tree
2019-11-29	Artem Zhmurov	Print OpenCL error info in case of failed assertion...	commit \| commitdiff \| tree
2019-11-28	Paul Bauer	Fix postsubmit	commit \| commitdiff \| tree
2019-11-28	Christian Blau	Fix check-pointing for density guided simulations	commit \| commitdiff \| tree
2019-11-26	Mark Abraham	Relax tolerance for bd tests	commit \| commitdiff \| tree
2019-11-26	Paul Bauer	Fix unused variable warning in ewald code	commit \| commitdiff \| tree
2019-11-26	Berk Hess	Fix issues with AWH with periodic pulling	commit \| commitdiff \| tree
2019-11-25	Christian Blau	Fix duplicate CONNECT records in pdb files	commit \| commitdiff \| tree
2019-11-25	Artem Zhmurov	Use same matrix for Parrinello-Rahman and Berendsen...	commit \| commitdiff \| tree
2019-11-25	Christian Blau	Read mrc density map format with all endianesses.	commit \| commitdiff \| tree
2019-11-25	Christian Blau	Check mrc header for sanity	commit \| commitdiff \| tree
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