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Fixed name clashes with pre-defined names in our favorite operating system from Redmo...
[alexxy/gromacs.git] / src /
2009-12-16 unknownFixed name clashes with pre-defined names in our favori... tree | commitdiff
2009-12-16 Teemu MurtolaUse read_stdin_line() for selections from a pipe. tree | commitdiff
2009-12-16 Roland SchulzAdded CMake code to enable option of building "old... tree | commitdiff
2009-12-15 Sander PronkFixes in autoconf and source for Math Kernel Library... tree | commitdiff
2009-12-15 Berk Hessfixed the cycle counter n for the PME subdivision tree | commitdiff
2009-12-15 Berk Hessadded PME subdivision to cycle counters tree | commitdiff
2009-12-14 Peter KassonMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-12-14 Peter KassonChanged SSE typecasts back to #defines for portability... tree | commitdiff
2009-12-14 Teemu MurtolaBetter selection stdin handling. tree | commitdiff
2009-12-14 Peter KassonMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-12-12 Erik LindahlReplaced acos-based method for calculating angles betwe... tree | commitdiff
2009-12-11 Peter KassonMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-12-11 Erik LindahlFixed signed/unsigned comparison mismatch in scanner... tree | commitdiff
2009-12-11 Erik LindahlMerge branch 'master' of git.gromacs.org:gromacs tree | commitdiff
2009-12-11 Erik LindahlFixed errors in vmdio.c when compiled with MSVC8, 64bit tree | commitdiff
2009-12-11 Per LarssonIncreased range and density in GB table tree | commitdiff
2009-12-11 Sander Pronkthread_mpi: fixed 32-bit x86 atomics + a small bug... tree | commitdiff
2009-12-10 kassonAdded CMake code to enable option of building "old... tree | commitdiff
2009-12-10 kassonWorkarounds for md5. tree | commitdiff
2009-12-09 Sander PronkAdded MPI_Cart_sub() to thread_mpi. tree | commitdiff
2009-12-09 Berk Hessfixed g_rdf -s -xy hanging tree | commitdiff
2009-12-07 David van der SpoelMerge branch 'master' of git.gromacs.org:gromacs tree | commitdiff
2009-12-04 Erik Lindahltypo in name for gmx_mm_castsi128_ps() tree | commitdiff
2009-12-04 Erik LindahlFixed gromacs wrapper fot _mm_castsi128_ps intrinsic... tree | commitdiff
2009-12-03 Erik LindahlCommitted all-angle-constraint fix from Peter Eastman... tree | commitdiff
2009-12-03 Erik LindahlEnabled separate PME nodes(threads) with thread-mpi... tree | commitdiff
2009-12-03 Sander PronkFixed more g_bar output issues. tree | commitdiff
2009-12-03 Sander Pronkfixed indexing error in g_bar introduced by previous... tree | commitdiff
2009-12-02 Berk Hessfixed incorrect g_bar check for missing lambda values tree | commitdiff
2009-12-02 Erik LindahlMerge branch 'master' of git.gromacs.org:gromacs tree | commitdiff
2009-12-02 Erik LindahlFixed mutex deadlock in gmx_fseek tree | commitdiff
2009-12-01 Roland Schulzunion instead of two pointers to same address (brakes... tree | commitdiff
2009-11-30 Roland Schulza few more ffopen/ffclose fixes tree | commitdiff
2009-11-30 Roland Schulzclose all files with ffclose which are opened with... tree | commitdiff
2009-11-30 Roland Schulzfull license text for vmd files tree | commitdiff
2009-11-30 Roland SchulzMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-30 Roland Schulzreorganized so that it is easier to use vmdplugins... tree | commitdiff
2009-11-30 Roland Schulzfix of error introduced by me doing C++ fixes tree | commitdiff
2009-11-30 Carsten Kutznerg_tune_pme now does proper cleanup also with pull simul... tree | commitdiff
2009-11-30 Sander PronkImproved formatting in output of g_bar. tree | commitdiff
2009-11-30 Sander PronkFixed deadlock when debug>0. tree | commitdiff
2009-11-28 Roland SchulzC++ Fixes for -with-x11 -enable-mpi tree | commitdiff
2009-11-27 Sander PronkFixed more C++ issues: the selection parser, and a... tree | commitdiff
2009-11-27 Sander PronkC++ fixes: thread_mpi fixes tree | commitdiff
2009-11-27 Sander PronkMore C++ fixes: C++ build works (for me)! tree | commitdiff
2009-11-27 Roland SchulzMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-27 Roland SchulzMore C++ fixes (const char), some formating tree | commitdiff
2009-11-27 Sander PronkMore C++ fixes: #include "gmx_ana.h" was missing in all tree | commitdiff
2009-11-27 Roland SchulzMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-27 Roland Schulz More C++ fixes 2/2: header files were not included... tree | commitdiff
2009-11-27 Sander PronkMore C++ fixes: header files were not included in their tree | commitdiff
2009-11-27 Roland SchulzMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-27 Roland SchulzC++ fixes part2; extern C fixes in header files a*... tree | commitdiff
2009-11-27 Roland Schulzfix to vmdplugin tree | commitdiff
2009-11-27 Michael ShirtsMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-26 Roland Schulzc++ fixes, mainly const char tree | commitdiff
2009-11-26 Roland Schulzonly allow any file extension for reading of trajectories tree | commitdiff
2009-11-26 Roland SchulzAdded VMD molfile plugin support to the analysis tools. tree | commitdiff
2009-11-26 Michael ShirtsCorrection to use the reference pressure, not the exter... tree | commitdiff
2009-11-26 Michael ShirtsChanged the pV term to the correct one, with the refere... tree | commitdiff
2009-11-23 Roland Schulzfixed md5 locking, removed misleading error message tree | commitdiff
2009-11-23 Sander PronkNon-bonded kernel source files now conditionally includ... tree | commitdiff
2009-11-23 Berkremoved MPI_Bcast of NULL pointers tree | commitdiff
2009-11-20 Sander PronkFixed typo in tpxio.c, as pointed out by Ake Sandgren tree | commitdiff
2009-11-19 Berk HessMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-19 Berk Hessfixed the g_rmsf -res option tree | commitdiff
2009-11-18 Berkimproved residue numbering tree | commitdiff
2009-11-18 Berkfixed incorrect file names in grompp warnings tree | commitdiff
2009-11-18 Berkfixed charge group size check in ns.c tree | commitdiff
2009-11-15 David van der SpoelAdded check for chdir return value. tree | commitdiff
2009-11-12 Berkfixed distance restraints when present in multiple... tree | commitdiff
2009-11-11 Peter KassonMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-11 Peter KassonPK bugfix for editconf tree | commitdiff
2009-11-11 Teemu MurtolaFixed segfaults with empty selections. tree | commitdiff
2009-11-11 Peter KassonMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-11 Peter KassonAdded -align and -aligncenter options for editconf. tree | commitdiff
2009-11-11 Teemu MurtolaMore general selection parser grammar. tree | commitdiff
2009-11-11 Berk Hessfixed compiler warning tree | commitdiff
2009-11-11 Berk Hessadded exclusion support for cg-cg loops tree | commitdiff
2009-11-11 Berkmade CG neighbor lists switchable with an env.var. tree | commitdiff
2009-11-10 Teemu Murtolagmxcpp fixes (bug #360 plus other fixes). tree | commitdiff
2009-11-10 Teemu MurtolaAdded a gmxdump -p option to preprocess topology. tree | commitdiff
2009-11-10 Berk HessMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-10 Berk Hessfixed g_anaeig incorrect masses for fitting when the... tree | commitdiff
2009-11-09 Peter KassonMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-09 Peter KassonFix to change sequential numbering in genconf and resid... tree | commitdiff
2009-11-09 Berkfixed problems with distance restraints in mulitple... tree | commitdiff
2009-11-09 Teemu MurtolaSome simple memory leak fixes. tree | commitdiff
2009-11-09 Teemu MurtolaAdded a resind selection keyword. tree | commitdiff
2009-11-09 Sander PronkMerge branch 'master' of git.gromacs.org:gromacs tree | commitdiff
2009-11-09 Sander Pronkfixes for atomic swap function & gmxfio md5 calc. tree | commitdiff
2009-11-09 Peter KassonResidue numbering functionality has changed. Added... tree | commitdiff
2009-11-08 Peter KassonMerge branch 'master' of git@git.gromacs.org:gromacs tree | commitdiff
2009-11-08 Peter KassonAdded code to restore old behavior of genconf -renumber... tree | commitdiff
2009-11-06 Teemu MurtolaSelection merge now works with constant positions. tree | commitdiff
2009-11-06 Teemu MurtolaA bit more modular selection position handling. tree | commitdiff
2009-11-06 Teemu MurtolaBetter g_energy -nmol behavior (bug #365). tree | commitdiff
2009-11-06 Berk Hessadded check for MPI support in init_multisystem tree | commitdiff
2009-11-05 Peter KassonModified genrestr to allow restraining only pairs withi... tree | commitdiff
2009-11-05 Teemu MurtolaMore modular position handling. tree | commitdiff
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