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Fix gpuudpate and gpucomm matrix docs
[alexxy/gromacs.git] / src /
2020-02-14 Pascal MerzExpand test coverage of exact continuation tests tree | commitdiff
2020-02-14 Pascal MerzFix reading of checkpoints with Parrinello-Rahman ... tree | commitdiff
2020-02-14 Pascal MerzFix Parrinello-Rahman scaling on initial step (modular... tree | commitdiff
2020-02-14 Pascal MerzMove modular simulator decision before checkpoint loading tree | commitdiff
2020-02-13 Pascal MerzFix checkNumberOfBondedInteractions bug tree | commitdiff
2020-02-13 Pascal MerzExpose vsite counting tree | commitdiff
2020-02-11 Szilárd PállFix incorrect GPU update task assignment fallback tree | commitdiff
2020-02-10 Szilárd PállAvoid (re)initializing GPU update without DD tree | commitdiff
2020-02-05 Alan GrayBug fix to avoid passing null object into cudaDestroyTe... tree | commitdiff
2020-02-04 Berk HessActually fix PME forces with FE without perturbed q/LJ tree | commitdiff
2020-01-24 Szilárd PállFix deadlock in PP-PME balancing startup delay tree | commitdiff
2020-01-23 Berk HessFix DD rank count prime check tree | commitdiff
2020-01-23 Artem ZhmurovFix a couple of commas in cool quotes tree | commitdiff
2020-01-23 Gaurav GargFix PME checks in GPU update assignment decision tree | commitdiff
2020-01-22 Berk HessFix illegal memory access in PME communication tree | commitdiff
2020-01-22 Berk HessClarify COMM/posres grompp note tree | commitdiff
2020-01-21 Paul BauerFix documentation error with doxygen >1.8.16 tree | commitdiff
2020-01-17 Berk HessAdd check for shells and GPU update tree | commitdiff
2020-01-16 Szilárd PállFix PME run mode without PME tree | commitdiff
2020-01-16 Paul BauerFix nightly build failure on Gitlab tree | commitdiff
2020-01-15 Berk HessFix multisim with parallel simulation tree | commitdiff
2020-01-13 Artem ZhmurovReport if update is running on the GPU or on the CPU tree | commitdiff
2020-01-08 Roland SchulzMerge release-2019 into release-2020 tree | commitdiff
2020-01-07 Roland SchulzWorkaround for ICC 19u5 and 20initial tree | commitdiff
2020-01-01 Erik LindahlAdd link to paper explaining GROMOS twin-range issues. tree | commitdiff
2019-12-31 Mark AbrahamAvoid 386 O3 codegen bug even more tree | commitdiff
2019-12-31 Artem ZhmurovInform user why forcing GPU update is not possible tree | commitdiff
2019-12-31 Artem ZhmurovFix gpuupdate matrix tree | commitdiff
2019-12-30 Mark AbrahamTests that verify serializer behaviours tree | commitdiff
2019-12-30 Mark AbrahamRemove use of tuple in LINCS code for GPU implementation tree | commitdiff
2019-12-29 Erik LindahlWrite TPR body as opaque XDR data in big-endian format tree | commitdiff
2019-12-28 Artem ZhmurovChange the behavior of the GPU update UI tree | commitdiff
2019-12-28 Mark AbrahamMerge "Merge origin/release-2019 into release-2020... tree | commitdiff
2019-12-27 Artem ZhmurovAdd a note to the log file when -update gpu was set... tree | commitdiff
2019-12-27 Paul BauerMerge origin/release-2019 into release-2020 tree | commitdiff
2019-12-27 Artem ZhmurovClean bad auto-format in decidegpuusage doxygen comments tree | commitdiff
2019-12-23 Paul BauerRevert "Fix that tests intended for multiple ranks... tree | commitdiff
2019-12-20 Christian BlauRemove problematic output of gmx angle tree | commitdiff
2019-12-20 Szilárd PállEnable buffer ops when GMX_GPU_DD_COMMS is set tree | commitdiff
2019-12-19 Alan GrayFix PME tuning issue when PME-PP communications are... tree | commitdiff
2019-12-19 Szilárd PállPP-PME load balancing improvements tree | commitdiff
2019-12-19 Berk HessFix mdrun appending invalidating energy files tree | commitdiff
2019-12-18 Alan GrayFix conditional on assertion for combining GPU Update... tree | commitdiff
2019-12-18 Szilárd PállAllow x D2H to overlap with GPU force compute tree | commitdiff
2019-12-18 Berk HessChange grompp decoupling SD warning to note tree | commitdiff
2019-12-17 Berk HessAdd note for COM removal with position restraints tree | commitdiff
2019-12-17 Artem ZhmurovClean-up buffer-ops CUDA kernels tree | commitdiff
2019-12-17 Paul BauerTest parallel mpi only with openmp tree | commitdiff
2019-12-17 Szilárd PállComment the use of waitCoordinatesCopiedToDevice tree | commitdiff
2019-12-17 Paul BauerFix compiler warning about extra ; tree | commitdiff
2019-12-17 Szilárd PállAdd wallcycle counting to StatePropagatorDataGpu tree | commitdiff
2019-12-17 Paul BauerFix formatting error tree | commitdiff
2019-12-17 Mark AbrahamFix that tests intended for multiple ranks run that way tree | commitdiff
2019-12-17 Pascal MerzFix exact continuation modular simulator tree | commitdiff
2019-12-16 Szilárd PállFix the GPU bonded stream with 1 PP + 1 PME rank tree | commitdiff
2019-12-16 Paul BauerFix torsion angle calculation tree | commitdiff
2019-12-15 Christian BlauFix densityfitting stalling and energies tree | commitdiff
2019-12-14 Mark AbrahamSimplify gmxapi RPATH handling tree | commitdiff
2019-12-13 Paul BauerCheck for using correct hwloc headers and runtime tree | commitdiff
2019-12-13 Artem ZhmurovClean up outdated comments in md.cpp tree | commitdiff
2019-12-12 Pascal MerzTest for expected output files tree | commitdiff
2019-12-12 Pascal MerzFix final configuration writing for modular simulator tree | commitdiff
2019-12-12 Szilárd PállAllow overlapping CPU force H2D with compute tree | commitdiff
2019-12-12 Christian BlauDensityfitting - enforce similarity increase with adapt... tree | commitdiff
2019-12-12 Artem ZhmurovAllow using GPU update with DD and update groups tree | commitdiff
2019-12-11 Artem ZhmurovEnable most of the pulling flavors with GPU update tree | commitdiff
2019-12-11 Mark AbrahamDocument DOMAINDECOMP(cr) correctly tree | commitdiff
2019-12-10 Mark AbrahamSimplify gmxapi RPATH handling tree | commitdiff
2019-12-10 Artem ZhmurovSet GPU update to false in case of a rerun tree | commitdiff
2019-12-07 M. Eric IrrgangFinalize gmxapi 0.1 tree | commitdiff
2019-12-06 Mark AbrahamAvoid 386 O3 codegen bug tree | commitdiff
2019-12-06 Artem ZhmurovPass array ref instead of casting to basic array in... tree | commitdiff
2019-12-06 Christian BlauChange arbitrary units to counts in RMSD distance distr... tree | commitdiff
2019-12-06 Mark AbrahamProvide more feedback when listed forces tests fail tree | commitdiff
2019-12-05 Christian BlauRelax cross-correlation test precision tree | commitdiff
2019-12-04 Mark AbrahamRemoved unnecessary link_directories command for gtest tree | commitdiff
2019-12-04 Christian BlauRemove cutoff-scheme group from default mdout.mdp output tree | commitdiff
2019-12-03 Paul BauerRevert "Enable GPU update with DD when GPU comm feature... tree | commitdiff
2019-12-03 Paul BauerFix nightly build by correctly defining several tree | commitdiff
2019-12-03 Alan GrayEnable GPU update with DD when GPU comm features are... tree | commitdiff
2019-12-02 Paul BauerSet update to run on GPU by default if possible tree | commitdiff
2019-12-02 Jonathan VincentHeuristics for switching between CUDA spread/gather... tree | commitdiff
2019-12-02 Berk HessAdd check for coupled constraints for CUDA update tree | commitdiff
2019-12-02 Berk HessExtract LINCS CUDA helper functions tree | commitdiff
2019-12-02 Christian BlauRelax test tolerance for cross correlation measure... tree | commitdiff
2019-12-01 Mark AbrahamFurther improve taskassignment exception handling tree | commitdiff
2019-11-29 Berk HessMerge "Merge branch release-2019 into release-2020... tree | commitdiff
2019-11-29 Paul BauerFix unaligned access with AVX512 tree | commitdiff
2019-11-29 Paul BauerFix build error without thread or regular mpi tree | commitdiff
2019-11-29 Artem ZhmurovPrint OpenCL error info in case of failed assertion... tree | commitdiff
2019-11-29 Mark AbrahamMerge branch release-2019 into release-2020 tree | commitdiff
2019-11-29 Artem ZhmurovMake Leap-Frog CUDA kernel selection safer tree | commitdiff
2019-11-29 Artem ZhmurovRename some variables in GPU Update tree | commitdiff
2019-11-28 Paul BauerCheck for using correct hwloc headers and runtime tree | commitdiff
2019-11-28 Artem ZhmurovClear device force buffer if it was reallocated tree | commitdiff
2019-11-28 Artem ZhmurovFix pressure coupling with GPU update tree | commitdiff
2019-11-28 Paul BauerFix postsubmit tree | commitdiff
2019-11-28 Berk HessRemove assertion failure in AWH without initial stage tree | commitdiff
2019-11-28 Berk HessFix bug with GPU pressure scaling at non T-scaling... tree | commitdiff
2019-11-28 Christian BlauFix check-pointing for density guided simulations tree | commitdiff
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