Fixed bug reporting initial DLB state
[alexxy/gromacs.git] / src /
2018-09-02 Kevin BoydFixed bug reporting initial DLB state
2018-08-24 Mark AbrahamFix build without TNG
2018-08-22 Paul BauerFix trjconv when running without a structure file
2018-08-22 Berk HessFix missing interactions with GPU and DD
2018-08-22 Mark AbrahamPermit PME on GPUs only for dynamical integrators
2018-08-21 Szilárd PállRequest flushing denorms to zero in OpenCL
2018-08-21 Berk HessEnsure domains are large enough for atom motion
2018-08-21 Berk HessFixed mdrun segv with QM/MM ONIOM scheme
2018-08-20 Berk HessRefactor calc_verlet_buffer_size()
2018-08-20 Berk HessFix Verlet buffer estimate with BD
2018-08-20 Berk HessFix assertion failure in CG
2018-08-20 Berk HessReally fix CG with multiple domains
2018-08-18 Berk HessAdd check for pull group PBC to grompp
2018-08-15 Szilárd PállImprove GPU detection sanity check error message
2018-08-14 Mark AbrahamFix enforced rotation energy output
2018-08-14 Erik LindahlFix SIMD anyTrue bug, and add better unit test
2018-08-06 Kevin BoydFix gmx solvate topology updating
2018-08-01 Paul BauerFix -skip option for gmx rms
2018-07-31 Kevin BoydReport up to date hwloc version information
2018-07-30 Mark AbrahamFix CG with multiple domains
2018-07-30 Paul BauerFix bfactor output
2018-06-13 Mark AbrahamFix premature reporting of action when GPUs are not...
2018-06-12 Berk HessAdd AWH continuation consistency checking
2018-06-12 Mark AbrahamMore fixes to suit gcc 8 for double build
2018-06-12 Szilárd PállAlso issue OMP_NUM_THREADS reading note to the log
2018-06-12 Viveca LindahlChanged histogram check interval for multidimensional...
2018-06-12 Berk HessAdd fatal error for inconsistent graph
2018-06-12 Berk HessAvoid COM removal moving frozen atoms
2018-06-12 Berk HessRemove constraint v correction for frozen atoms
2018-06-08 Paul BauerFix gmx solvate with multiple solvent molecule types
2018-06-06 Berk HessFix MPI inconsistency in EM after constraint failure
2018-06-06 Viveca LindahlMake sure that the value of awh-nsamples-update is...
2018-06-06 Erik LindahlUse default CMake path variables
2018-06-06 Paul BauerFix PQR file output
2018-06-06 Erik LindahlBump GMX_BUILD_OWN_FFTW to 3.3.8 to avoid bugs
2018-06-05 Mark AbrahamFixed enemat when .edr had no matching energy groups
2018-06-05 Mark AbrahamImproved docs for gmx mindist -pi
2018-06-04 Berk HessFix segv in AWH error message
2018-05-30 Paul BauerDisallow use of empty box information in solvent files
2018-05-22 Aleksei IupinovRemove unused results of cudaStreamQuery()
2018-05-21 Roland SchulzFix illegal instruction error on KNL
2018-05-03 Berk HessEnable SIMD version of update
2018-04-24 Berk HessFix indexing issue in the pull code
2018-04-18 Paul BauerRemove obsolete variable prec gro file output
2018-04-10 Aleksei IupinovPrevent OpenCL timing memory leak
2018-04-03 Berk HessChange warninp filenm to std::string
2018-03-27 Mark AbrahamMore gcc-8 fixes for POWER
2018-03-20 Mark AbrahamMerge branch release-2016 into release-2018
2018-03-20 Vedran MiletićDocument matrix_convert function in PBC
2018-03-20 Berk HessFix gmx dump AWH formatting issue
2018-03-20 Berk HessDisallow single simulation with multisim
2018-03-19 Mark AbrahamFix VSX SIMD with gcc 8
2018-03-16 Berk HessCorrect PMF sign error in AWH bias sharing
2018-03-16 Berk HessFix recent mdrun signaling bug
2018-03-15 Berk HessFix virial with external pull potential and MPI
2018-03-14 Berk HessImprove inter-simulation signaling
2018-03-14 Berk HessFix mdrun signalling with AWH bias sharing
2018-03-14 Berk HessFix COM pulling with external potential with #ranks>32
2018-03-14 Berk HessFix pull bug with geometry=direction-periodic
2018-03-13 Berk HessFix AWH ensemble checkpointing
2018-03-13 Berk HessFix AWH deconvolution when sharing a bias
2018-03-09 Berk HessCorrect pdb2gmx -missing option
2018-03-06 Mark AbrahamFixed dvdlambda for SHAKE + FE
2018-03-06 Berk HessMake multi-atom TPI reproducible
2018-03-05 Viveca LindahlAdd checks for non-null log file pointer in AWH
2018-03-05 Berk HessWork around gcc bug with group kernel tables
2018-03-05 Szilárd PállAdd to the contributor section
2018-03-02 Berk HessFix AWH bias-sharing with parallel simulation
2018-03-01 Berk HessDetect AMD SMT topology
2018-03-01 Berk HessFix mdrun multisim with separate PME ranks
2018-02-27 Mark AbrahamFix GPU utils test
2018-02-26 Mark AbrahamPermit define .mdp field to assign values
2018-02-23 Berk HessFix md integrator with Nose-Hoover coupling
2018-02-20 Szilárd PállAvoid aborting mdrun when GPU sanity check detects...
2018-02-16 Mark AbrahamMerge branch release-2016 into release-2018
2018-02-16 Berk HessCorrect multisim MPI barrier
2018-02-16 Aleksei IupinovFix PME for large systems with Fermi GPUs
2018-02-15 Aleksei IupinovAdd the missing comma in the quote
2018-02-14 Mark AbrahamMerge branch release-2016 into release-2018
2018-02-14 Berk HessFix range bug in add_selection_groups in tngio.cpp
2018-02-14 Mark AbrahamFix bug in checkpoint error checking
2018-02-14 Berk HessFix grompp net charge check
2018-02-14 Berk HessFix grompp net charge check
2018-02-13 Mark AbrahamUse death test only when supported
2018-02-08 Mark AbrahamUse more portable python shebangs
2018-02-08 Mark AbrahamMerge "Merge branch release-2016 into release-2018...
2018-02-08 Mark AbrahamMerge branch release-2016 into release-2018
2018-02-08 Berk HessUse SIMD bondeds without perturbed interactions
2018-02-08 Berk HessAllow bonds with distance=0
2018-02-06 Aleksei IupinovZero unused values to silence the warning
2018-02-06 Mark AbrahamPrevent log file energy average printing dividing by...
2018-02-06 Mark AbrahamUse isfinite unambiguously
2018-02-06 Aleksei IupinovOnly setup Ewald in the generic group kernel if it...
2018-02-05 Berk HessSet cutoff modifiers in forcerec
2018-02-05 Berk HessFix assertion failure in TPI
2018-01-19 Roland SchulzAVX512 GCC 5.3 work-around
2018-01-18 Berk HessFix COMM removal on part of the system
2018-01-18 Berk HessAdd check in grompp to avoid assertion failure
2018-01-17 Aleksei IupinovFix box scaling in PME mixed mode
2018-01-17 Berk HessRe-enable GPU with walls and 1 energy group
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