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enable GPU emulation without GPU support
[alexxy/gromacs.git]
/
src
/
2012-11-28
Szilard Pall
enable GPU emulation without GPU support
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commitdiff
2012-11-27
Michael Shirts
Removes memory allocation from free energy foreign...
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commitdiff
2012-11-27
Roland Schulz
Add visibility defines
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commitdiff
2012-11-27
Erik Lindahl
Merge "Added affinity support check, visibility macros...
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commitdiff
2012-11-27
Erik Lindahl
Merge "fixed bug in nbnxn OpenMP non-bonded force reduc...
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commitdiff
2012-11-27
David van der Spoel
Merge "Merge release-4-5-patches into release-4-6"...
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commitdiff
2012-11-27
Berk Hess
fixed bug in nbnxn OpenMP non-bonded force reduction
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commitdiff
2012-11-27
Sander Pronk
Added affinity support check, visibility macros in...
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commitdiff
2012-11-26
Sander Pronk
Fixed issues with g_bar help text.
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commitdiff
2012-11-26
Roland Schulz
Merge release-4-5-patches into release-4-6
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commitdiff
2012-11-26
Roland Schulz
Merge "Clean up some mathematical constants" into relea...
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commitdiff
2012-11-26
Erik Lindahl
Merge "Use stat for gmx_is_file. Fix get_libdir with...
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commitdiff
2012-11-26
Berk Hess
made nbnxn analytical Ewald consistent
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commitdiff
2012-11-26
Mark Abraham
Clean up some mathematical constants
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commitdiff
2012-11-26
Sander Pronk
Made the linear extrapolation in g_bar non-default...
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commitdiff
2012-11-26
Erik Lindahl
Merge "Extended build information output and reference...
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commitdiff
2012-11-26
David van der Spoel
Fixes #1035 NaN in g_cluster output.
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commitdiff
2012-11-26
Berk Hess
added nbnxn analytical Ewald correction kernels
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commitdiff
2012-11-25
Teemu Murtola
Extended build information output and reference build...
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commitdiff
2012-11-24
Roland Schulz
Use stat for gmx_is_file. Fix get_libdir with symlinks.
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commitdiff
2012-11-23
Roland Schulz
Merge "removed group non-boneded call with verlet schem...
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commitdiff
2012-11-23
Roland Schulz
Merge "improve FindGROMACS.cmake" into release-4-6
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commitdiff
2012-11-23
Roland Schulz
Force C++ linking of the gpu_utils
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commitdiff
2012-11-23
Szilárd Páll
Merge "Updates to CMake treatment of OpenMP" into relea...
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commitdiff
2012-11-23
Szilard Pall
removed group non-boneded call with verlet scheme
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commitdiff
2012-11-23
Roland Schulz
Merge changes I88f0dcef,I86b2a8cf,I70fb7e6d into releas...
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commitdiff
2012-11-22
Erik Lindahl
Fix for icc 13 optimization-related issue and TIP4P...
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commitdiff
2012-11-22
Erik Lindahl
Implemented RMS-based force tolerance in gmxcheck
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commitdiff
2012-11-22
Erik Lindahl
Fixed LJ-14 error in free energy
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commitdiff
2012-11-22
Mark Abraham
Speed up mdlib compilation by reordering file globs
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commitdiff
2012-11-20
Christoph Junghans
Merge "Fix g_msd -mol" into release-4-6
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commitdiff
2012-11-20
Christoph Junghans
Merge "Fixes bug in g_hbond that makes it produce fatal...
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commitdiff
2012-11-20
David van der Spoel
Fixes bug in g_hbond that makes it produce fatal error.
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commitdiff
2012-11-20
Roland Schulz
Merge release-4-5-patches into release-4-6
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commitdiff
2012-11-19
Roland Schulz
Merge changes Ibc555d88,Iaf6f3051 into release-4-6
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commitdiff
2012-11-19
Mark Abraham
Merge "SSE4.1 single-precision kernels" into release-4-6
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commitdiff
2012-11-19
Erik Lindahl
SSE4.1 single-precision kernels
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commitdiff
2012-11-19
Roland Schulz
Merge "Remove double declaration in headers" into relea...
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commitdiff
2012-11-17
Roland Schulz
Remove double declaration in headers
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commitdiff
2012-11-17
David van der Spoel
Merge "Added grompp warning" into release-4-6
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commitdiff
2012-11-17
David van der Spoel
Merge "Remove rest of the xml support" into release-4-6
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commitdiff
2012-11-17
Roland Schulz
Merge "Removing Zn and Ar non-OPLS atom types" into...
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commitdiff
2012-11-16
Mark Abraham
Added grompp warning
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commitdiff
2012-11-16
Christoph Junghans
Remove rest of the xml support
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commitdiff
2012-11-16
David van der Spoel
Merge "Removes unused files" into release-4-6
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commitdiff
2012-11-16
Erik Lindahl
SSE2 single-precision kernels
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commitdiff
2012-11-16
Roland Schulz
Removes unused files
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commitdiff
2012-11-16
Berk Hess
reduced the cost of the nbnxn OpenMP nb-force reduction
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commitdiff
2012-11-15
Christoph Junghans
Merge "Test that compiling and linking of AVX works...
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commitdiff
2012-11-15
Berk Hess
fixed incorrect 1-4 energies with OpenMP + energy groups
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commitdiff
2012-11-14
Berk Hess
fixed nbnxn x86 SIMD non-bonded performance regression
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commitdiff
2012-11-13
Erik Lindahl
Removed some unnecessary instructions, and fixed a...
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commitdiff
2012-11-12
Roland Schulz
Merge "Backport ThreadMPI.cmake version from master...
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commitdiff
2012-11-12
Roland Schulz
Merge "nbnxn CPU force buffer reduction now uses SIMD...
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commitdiff
2012-11-12
Berk Hess
nbnxn CPU force buffer reduction now uses SIMD
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commitdiff
2012-11-12
David van der Spoel
Fixes #1020 options in g_enemat
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commitdiff
2012-11-11
Roland Schulz
Fix FMA4 compile for GCC and MSVC
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commitdiff
2012-11-10
Roland Schulz
Merge "Fix broken manual formatting" into release-4-6
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commitdiff
2012-11-10
Roland Schulz
Fix g_msd -mol
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commitdiff
2012-11-10
Teemu Murtola
Remove obsolete GMX_THREAD_SHM_FDECOMP.
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commitdiff
2012-11-09
Roland Schulz
Fix component for libcudart
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commitdiff
2012-11-09
Erik Lindahl
Removed old (now unused) bluegene kernels.
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commitdiff
2012-11-09
Erik Lindahl
Removed unused old kernel generator
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commitdiff
2012-11-09
Erik Lindahl
Removal of stale Fortran/Power6 kernels
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commitdiff
2012-11-09
Erik Lindahl
Removal of stale Fortran kernels
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commitdiff
2012-11-09
Kasson
Merge "only use CPU_COUNT if it's available" into relea...
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commitdiff
2012-11-09
Szilard Pall
only use CPU_COUNT if it's available
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commitdiff
2012-11-08
Roland Schulz
Merge "Fixed bug in the new switch-modified interaction...
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commitdiff
2012-11-08
Christoph Junghans
Merge "auto-set nvcc host compiler with FindMPI detecti...
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commitdiff
2012-11-08
Christoph Junghans
Merge "Relocated logic of simple-vs-GPU Ewald table...
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commitdiff
2012-11-08
Erik Lindahl
Fixed bug in the new switch-modified interactions in...
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commitdiff
2012-11-08
Erik Lindahl
Allow rcoulomb=rlistlong for PME with nstcalclr=1
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commitdiff
2012-11-08
Mark Abraham
Relocated logic of simple-vs-GPU Ewald table generation
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commitdiff
2012-11-08
Erik Lindahl
Infrastructure for new group kernels, and new C kernels
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commitdiff
2012-11-07
Christoph Junghans
Obey DSO standard
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commitdiff
2012-11-07
Szilard Pall
detect externally set CPU affinity
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commitdiff
2012-11-06
Roland Schulz
Merge "Clarification of mdp_opt, add nstexpand defaults...
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commitdiff
2012-11-06
Berk Hess
Merge "Add option to install libcudart" into release-4-6
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commitdiff
2012-11-06
Michael Shirts
Clarification of mdp_opt, add nstexpand defaults &...
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commitdiff
2012-11-06
Berk Hess
Merge "don't execute any mpi_info/mpiname in the path...
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commitdiff
2012-11-06
Carsten Kutzner
Made g_tune_pme work correctly when ir->init_step > 0
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commitdiff
2012-11-05
Berk Hess
Merge "updated several things related with OpenMP threa...
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commitdiff
2012-11-05
Roland Schulz
Add option to install libcudart
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commitdiff
2012-11-05
Berk Hess
updated several things related with OpenMP thread count
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commitdiff
2012-11-03
Roland Schulz
Merge release-4-5-patches into release-4-6
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commitdiff
2012-10-31
Szilard Pall
fix internal/external OpenMP thread affinity clash
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commitdiff
2012-10-27
Christoph Junghans
Merge "Fix large file support" into release-4-5-patches
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commitdiff
2012-10-26
Roland Schulz
Fix usage of CMAKE_REQUIRED_*
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commitdiff
2012-10-26
Roland Schulz
Merge "fixed incorrect PME load balancing limitation...
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commitdiff
2012-10-26
Christoph Junghans
Merge "enable GMX_PREFER_STATIC_LIBS CMake option on...
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commitdiff
2012-10-26
Christoph Junghans
Merge "fix false positive gcc 4.7 warning in libxdrf...
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commitdiff
2012-10-26
David van der Spoel
Merge "Fixed Pulp Fiction quote" into release-4-5-patches
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commitdiff
2012-10-26
Berk Hess
fixed incorrect PME load balancing limitation
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commitdiff
2012-10-26
Roland Schulz
Merge "set the default for nstdhdl to 100" into release-4-6
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commitdiff
2012-10-26
Berk Hess
set the default for nstdhdl to 100
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commitdiff
2012-10-26
Berk Hess
fixed incorrect group energies with nbnxn CPU kernels
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commitdiff
2012-10-25
Roland Schulz
Merge "fix CUDA non-bonded kernel pointer assignment...
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commitdiff
2012-10-25
Szilárd Páll
fix false positive gcc 4.7 warning in libxdrf
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commitdiff
2012-10-23
Berk Hess
fixed bondfree.c thread safety with free energy
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commitdiff
2012-10-23
Roland Schulz
Merge "moved part of nbnxn_search.c to nbnxn_atomdata...
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commitdiff
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