Redefine the default boolean type to gmx_bool.
[alexxy/gromacs.git] / src /
2010-08-25 Rossen ApostolovRedefine the default boolean type to gmx_bool.
2010-08-25 Erik LindahlAdded missing header include
2010-08-25 hessturned on pdb2gmx Amber rtp renaming for pdb input...
2010-08-25 hessfixed pdb2gmx not automatically changing termini rtp...
2010-08-25 David van der SpoelMade genrestr -constr to produce constraints of type...
2010-08-25 Erik LindahlMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-25 Erik LindahlMade sure all source files have some copyright header...
2010-08-25 Mark AbrahamFixed leak from unclosed directory handles when pdb2gmx...
2010-08-25 Mark AbrahamMade pdb2gmx be slightly more helpful when using AMBER...
2010-08-24 Erik LindahlRe-added openmm paper
2010-08-24 Erik LindahlMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-24 Erik LindahlUpdated intel syntax x86-64 asm files to also support...
2010-08-24 hesspdb2gmx can now rename terminal rtp entries with rtp...
2010-08-24 Berk Hessfixed pdb2gmx using start name iso end name for C-terminus
2010-08-24 Berk Hessfixed bug in search_rtp introduced in previous commit
2010-08-24 Berk Hessupdated gmx_membed.c for a VV update
2010-08-24 Berk Hessfixed pdb2gmx behavior for nearly matching residue...
2010-08-24 hessfixed too permissive check for pdb2gmx warning about...
2010-08-24 hessreenabled the pdb2gmx force field sorting
2010-08-23 Rossen ApostolovMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-23 Rossen ApostolovFixed a typo about non-existing macro in OpenMM
2010-08-23 Christoph JunghansFixed threads flags in pc files for autotools
2010-08-23 Berk Hessremoved the pdb2gmx -cwd option and updated the pdb2gmx...
2010-08-23 Berk Hesspdb2gmx now prints the force field dir before the selec...
2010-08-23 Mark AbrahamTwo spelling fixes in comment and output
2010-08-23 Pär BjelkmarMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-23 Berk Hessfixed mpi hang/crash with separate pme nodes and dd...
2010-08-22 Erik LindahlFixed uninitialized variable error in GB kernel with...
2010-08-22 Erik LindahlFixed an unsigned/signed integer comparison
2010-08-22 Erik LindahlFixed two more instances of strcasecmp->gmx_strcasecmp
2010-08-22 Erik LindahlCopied SSE intrinsics kernels from x86-64 to ia32
2010-08-22 Erik LindahlReplaced all occurences of str(n)casecmp with gmx_str...
2010-08-22 Erik LindahlFixed stupid mistake where a statement was placed befor...
2010-08-22 Erik LindahlReplaced testing of git version with testing for features
2010-08-22 Erik LindahlFixed naming problems for double precision Fortran...
2010-08-22 Erik LindahlMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-22 Erik LindahlCleaned up all installed headers to remove strict depen...
2010-08-22 David van der SpoelFixed bug 417.
2010-08-21 Erik LindahlAdded F77 kernel setup headers
2010-08-21 Erik LindahlFixed synchronization counter update for f77 kernels
2010-08-21 Erik LindahlFixed a bug for GB OBC born radius calculation in SSE2...
2010-08-21 Erik LindahlFixed an uninitialized variable bug
2010-08-21 Erik LindahlFixed a minor bug that caused Fortran builds to fail...
2010-08-21 Erik LindahlDont write nonpolar surface energy to energy file if...
2010-08-21 Erik LindahlFixed so Fortran kernels work again
2010-08-21 Erik LindahlFixed a chain rule error in double prec. SSE2 GB for...
2010-08-21 Erik LindahlMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-21 Erik LindahlDouble precision SSE2 kernels for Generalized Born...
2010-08-20 Sander PronkAdded support for new mdp options controlling free...
2010-08-20 Berk Hessadded function do_cpte_n_reals to checkpoint.c
2010-08-20 Berk Hessfixed automated DD/PME grid decomposition choice which...
2010-08-20 Berk Hessdisabled optimized IBM BlueGene converts2ints macro...
2010-08-20 Berk Hessincreased tpx_generation which should have been done...
2010-08-20 Berk Hesseneconv now copies the new delta_t entry
2010-08-20 Berk Hessadded dt to energy file frames
2010-08-20 Berk Hessadded free and some comment to deprecated close_trj
2010-08-20 Berk Hessfixed segv's in g_anaeig
2010-08-19 David van der SpoelFixes more misery in function skipstr, where pointers...
2010-08-19 David van der SpoelAdded two missing include files. Fixed horrible coding...
2010-08-19 Sander PronkFixed get_libdir() PATH search.
2010-08-19 Rossen ApostolovEnable the Reference platform for OpenMM.
2010-08-19 Michael ShirtsAdditional fixes to the nsttcouple and nstpcouple worki...
2010-08-19 Michael ShirtsAdditional changes for setting nsttcouple
2010-08-19 Michael ShirtsFix for readir.c so that nstpcouple and nsttcouple...
2010-08-19 Michael ShirtsFixed bug with md-vv and with v-rescale
2010-08-19 Michael ShirtsProposed fix for v-rescale and berendsen for velocity...
2010-08-19 Michael ShirtsMerge branch 'release-4-5-patches' of git@git.gromacs...
2010-08-18 Erik LindahlUpdated GB SSE2 kernels, testing in progress now...
2010-08-18 Michael ShirtsMerge branch 'release-4-5-patches' of git@git.gromacs...
2010-08-18 Erik LindahlMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-18 Rossen ApostolovMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-18 Rossen ApostolovFixed the execution order in OpenMM so that the generat...
2010-08-18 Christoph Junghanscmake: add so version to libs
2010-08-18 Christoph Junghansport lib suffixes to cmake
2010-08-18 Erik LindahlMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-18 Erik LindahlFix to write GB and surface energy to separate terms...
2010-08-18 Berk Hessreduced the warning limit for Berendsen T-coupling...
2010-08-18 Michael ShirtsMerge branch 'release-4-5-patches' of git@git.gromacs...
2010-08-18 Michael ShirtsChanged the way energy conservation bookeeping is done.
2010-08-18 Berk Hessremoved the bNEMD boolean from the main MD loop and...
2010-08-18 Berk Hessadded some comment to group grompp assignment options
2010-08-18 Berk Hessadded group comparison to gmxcheck and print groups...
2010-08-18 Erik LindahlMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-18 Erik LindahlEnabled double precision all-vs-all kernels. Tested...
2010-08-18 Berk Hessfixed possible pathe string buffer overflow in get_libdir
2010-08-18 Erik LindahlFixed simple typo in last commit
2010-08-18 Erik LindahlFixed previous nasm-segv bug for intel-syntax SSE in...
2010-08-17 Erik LindahlFixed 64-bit bug in SSE assembly (only visible with...
2010-08-17 Erik LindahlWorked around an internal compiler error for MSVC when...
2010-08-17 Erik LindahlMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-17 Erik LindahlDeprecated -ins option to g_hbond since nobody seems...
2010-08-17 Sander Pronkfsync fix for FAH core.
2010-08-17 Erik LindahlCopied all-vs-all change from x86-64 to ia32 kernels too
2010-08-17 Erik LindahlMerge branch 'release-4-5-patches' of git.gromacs.org...
2010-08-17 Erik LindahlFixed potential error in coulomb energy, and maybe...
2010-08-17 Michael ShirtsMerge branch 'release-4-5-patches' of git@git.gromacs...
2010-08-17 Christoph Junghansstore custom GMX defines in pkgconfig files for cmake
2010-08-17 Christoph Junghansstore custom GMX defines in pkgconfig files for autotools
2010-08-17 Berk Hessadded function rescale_velocities
2010-08-17 Roland SchulzUse always DIR_SEPARATOR
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