biod.pnpi.spb.ru
/
alexxy
/
gromacs.git
/ history
commit
grep
author
committer
pickaxe
?
search:
re
summary
|
shortlog
|
log
|
commit
|
commitdiff
|
tree
first ⋅ prev ⋅ next
added Verlet scheme and NxN non-bonded functionality
[alexxy/gromacs.git]
/
src
/
mdlib
/
tgroup.c
2012-10-02
Szilard Pall
added Verlet scheme and NxN non-bonded functionality
blob
|
commitdiff
|
raw
2012-10-01
Roland Schulz
Merge release-4-5-patches into release-4-6
blob
|
commitdiff
|
raw
|
diff to current
2012-09-03
Szilard Pall
Merge branch 'release-4-5-patches' into release-4-6
blob
|
commitdiff
|
raw
|
diff to current
2012-07-13
Roland Schulz
Merge release-4.5-patches into HEAD
blob
|
commitdiff
|
raw
|
diff to current
2012-06-04
Michael Shirts
Merging in free energy, exp. ensemble, & andersen t...
blob
|
commitdiff
|
raw
|
diff to current
2011-01-30
David van der Spoel
Merge branch 'release-4-5-patches' into orderparm
blob
|
commitdiff
|
raw
|
diff to current
2010-08-25
Rossen Apostolov
Redefine the default boolean type to gmx_bool.
blob
|
commitdiff
|
raw
|
diff to current
2010-08-18
Erik Lindahl
Merge branch 'release-4-5-patches' of git.gromacs.org...
blob
|
commitdiff
|
raw
|
diff to current
2010-08-18
Michael Shirts
Merge branch 'release-4-5-patches' of git@git.gromacs...
blob
|
commitdiff
|
raw
|
diff to current
2010-08-18
Berk Hess
removed the bNEMD boolean from the main MD loop and...
blob
|
commitdiff
|
raw
|
diff to current
2010-06-09
Gerrit Groenhof
Merge branch 'master' into qmmm
blob
|
commitdiff
|
raw
|
diff to current
2010-04-27
Berk Hess
resolved merge conflicts
blob
|
commitdiff
|
raw
|
diff to current
2010-03-02
Roland Schulz
Merge branch 'release-4-0-patches'
blob
|
commitdiff
|
raw
|
diff to current
2009-12-21
David van der Spoel
Merge branch 'master' of git@git.gromacs.org:gromacs
blob
|
commitdiff
|
raw
|
diff to current
2009-12-20
Michael Shirts
Merge branch 'master' of git@git.gromacs.org:gromacs
blob
|
commitdiff
|
raw
|
diff to current
2009-12-19
Michael Shirts
Merge branch 'master' of git@git.gromacs.org:gromacs
blob
|
commitdiff
|
raw
|
diff to current
2009-12-17
Michael Shirts
Merge branch 'master' of git@git.gromacs.org:gromacs
blob
|
commitdiff
|
raw
|
diff to current
2009-12-05
Michael Shirts
Merge branch 'master' of git@git.gromacs.org:gromacs
blob
|
commitdiff
|
raw
|
diff to current
2009-11-23
Michael Shirts
Apparently works with all the methods now, both with...
blob
|
commitdiff
|
raw
|
diff to current
2009-11-20
Michael Shirts
Working with velocity verlet / harmonic bonds with...
blob
|
commitdiff
|
raw
|
diff to current
2009-11-20
Michael Shirts
Almost working now! not vv for average kinetic energy...
blob
|
commitdiff
|
raw
|
diff to current
2009-11-19
Michael Shirts
Partway through with rationalization of different integ...
blob
|
commitdiff
|
raw
|
diff to current
2009-11-18
Michael Shirts
Fix for kinetic average energy.
blob
|
commitdiff
|
raw
|
diff to current
2009-11-14
Michael Shirts
changed setup of trotter decomposition to make it easie...
blob
|
commitdiff
|
raw
|
diff to current
2009-10-25
Michael Shirts
Made changes suggested by Berk.
blob
|
commitdiff
|
raw
|
diff to current
2009-09-26
Michael Shirts
Merge branch 'master' of git@git.gromacs.org:gromacs
blob
|
commitdiff
|
raw
|
diff to current
2009-09-26
Michael Shirts
Now we are getting energy conservation with NPT, and...
blob
|
commitdiff
|
raw
|
diff to current
2009-09-23
Michael Shirts
Merge branch 'master' of git@git.gromacs.org:gromacs
blob
|
commitdiff
|
raw
|
diff to current
2009-09-09
Michael Shirts
Merge branch 'master' of git://git.gromacs.org/gromacs
blob
|
commitdiff
|
raw
|
diff to current
2009-09-07
Michael Shirts
A number of changes to gromacs_mrs. Almost working...
blob
|
commitdiff
|
raw
|
diff to current
2009-06-17
Sander Pronk
Merge branch 'thread_mpi'
blob
|
commitdiff
|
raw
|
diff to current
2009-06-17
Berk Hess
removed static variables
blob
|
commitdiff
|
raw
|
diff to current
2009-06-04
Erik Lindahl
Removed Id tags from master branch since they will...
blob
|
commitdiff
|
raw
|
diff to current
2008-12-03
hess
removed gmx_ener
blob
|
commitdiff
|
raw
|
diff to current
2008-08-11
hess
split the t_group struct into a gmx_ekindata_t struct...
blob
|
commitdiff
|
raw
|
diff to current
2008-08-05
hess
t_topology is now partially replaced by gmx_mtop_t...
blob
|
commitdiff
|
raw
|
diff to current
2008-07-03
hess
removed the t_groups pointer from init_md which caused...
blob
|
commitdiff
|
raw
|
diff to current
2008-04-11
hess
implemented checkpoint files
blob
|
commitdiff
|
raw
|
diff to current
2008-01-04
hess
moved the sum_epot call into do_force, added dispcorr...
blob
|
commitdiff
|
raw
|
diff to current
2007-11-27
hess
removed global variable stdlog
blob
|
commitdiff
|
raw
|
diff to current
2007-04-18
hess
mdrun now print the conserved energy for NVT Nose-Hoove...
blob
|
commitdiff
|
raw
|
diff to current
2006-04-19
hess
made size of mdatoms variable and disabled each group...
blob
|
commitdiff
|
raw
|
diff to current
2005-04-15
hess
got rid of the obsolete TYZ stuff
blob
|
commitdiff
|
raw
|
diff to current
2005-04-07
hess
changed Ekin to the average of the half step Ekin's...
blob
|
commitdiff
|
raw
|
diff to current
2005-01-19
hess
in sum_epot changes epot[F_COUL_SR] += to = , this...
blob
|
commitdiff
|
raw
|
diff to current
2004-12-14
hess
renamed all dummy/dummies to vsite/vsites in all filena...
blob
|
commitdiff
|
raw
|
diff to current
2004-09-06
spoel
Replaced the fatal_error routine by a more flexible...
blob
|
commitdiff
|
raw
|
diff to current
2004-08-10
hess
added reaction-field correction for excluded atom pairs...
blob
|
commitdiff
|
raw
|
diff to current
2004-06-24
hess
fixed sum_epot to not add the violations and deviations
blob
|
commitdiff
|
raw
|
diff to current
2004-01-23
lindahl
Added conditional inclusion of config.h to source files.
blob
|
commitdiff
|
raw
|
diff to current
2003-11-17
spoel
Upped the version to 3.2.0
blob
|
commitdiff
|
raw
|
diff to current
2003-06-12
hess
added a struct t_state which should contain all informa...
blob
|
commitdiff
|
raw
|
diff to current
2002-11-06
lindahl
Partial commit of the project to remove all static...
blob
|
commitdiff
|
raw
|
diff to current
2002-02-28
spoel
Renamed pull-internal.h to pull_internal.h
blob
|
commitdiff
|
raw
|
diff to current
2002-02-28
lindahl
Updated manual and html pages, and changed version...
blob
|
commitdiff
|
raw
|
diff to current
2001-05-14
lindahl
Tagged files with gromacs 3.0 header
blob
|
commitdiff
|
raw
|
diff to current
2000-08-22
lindahl
Introduced Nose-Hoover and Parinello-Rahman extended...
blob
|
commitdiff
|
raw
|
diff to current
2000-02-10
hess
added softcore option in inputrec, removed deltagrid...
blob
|
commitdiff
|
raw
|
diff to current
2000-02-04
spoel
Fixed compilation issues and NEMD stuff
blob
|
commitdiff
|
raw
|
diff to current
2000-02-04
spoel
Removed unnecessary communication round for acceleratio...
blob
|
commitdiff
|
raw
|
diff to current
1999-11-03
hess
copyrgted
blob
|
commitdiff
|
raw
|
diff to current
1999-09-03
hess
split the 1-4 energy into LJ and Coulomb, rearranged...
blob
|
commitdiff
|
raw
|
diff to current
1999-07-26
lindahl
Changed energy sums to include LR contributions not...
blob
|
commitdiff
|
raw
|
diff to current
1999-05-14
hess
moved from gmxlib to mdlib
blob
|
commitdiff
|
raw
|
diff to current