BioD PNPI Git Repos - alexxy/gromacs.git/history

biod.pnpi.spb.ru / alexxy / gromacs.git / history

[alexxy/gromacs.git] / src / gromacs / domdec / domdec.cpp

2021-02-26	Joe Jordan	Only use const ref for mtop and inputrec in domdec	blob \| commitdiff \| raw
2021-02-22	Mark Abraham	Hide newly exposed domdec internals	blob \| commitdiff \| raw \| diff to current
2021-02-22	Paul Bauer	Refactor md_enums	blob \| commitdiff \| raw \| diff to current
2021-02-19	Berk Hess	Clean up DD reverse topology options	blob \| commitdiff \| raw \| diff to current
2021-02-12	Mark Abraham	Merge branch release-2021 into master	blob \| commitdiff \| raw \| diff to current
2021-02-11	Artem Zhmurov	Fix MPI build	blob \| commitdiff \| raw \| diff to current
2021-02-05	Paul Bauer	Clean up domdec again after clang-tidy-11 fixes	blob \| commitdiff \| raw \| diff to current
2021-02-05	Paul Bauer	Fix clang-tidy-11 for domdec and utility	blob \| commitdiff \| raw \| diff to current
2021-02-01	Mark Abraham	Replace gmx::Mutex with std::mutex	blob \| commitdiff \| raw \| diff to current
2021-01-29	Mark Abraham	Merge branch release-2021	blob \| commitdiff \| raw \| diff to current
2021-01-07	Paul Bauer	Merge branch release-2020 into merge-2020-into-2021	blob \| commitdiff \| raw \| diff to current
2020-12-18	Mark Abraham	Merge branch release-2021	blob \| commitdiff \| raw \| diff to current
2020-12-16	M. Eric Irrgang	Apply re-formatting to C++ in src/ tree.	blob \| commitdiff \| raw \| diff to current
2020-11-24	Paul Bauer	Merge branch 'origin/release-2020' into merge-2020...	blob \| commitdiff \| raw \| diff to current
2020-10-20	Paul Bauer	Merge branch 'origin/release-2020' into merge-release...	blob \| commitdiff \| raw \| diff to current
2020-10-07	Paul Bauer	Merge branch 'origin/release-2020' into merge-release...	blob \| commitdiff \| raw \| diff to current
2020-09-28	Alan Gray	Remove single-dimension limitation from GPU halo exchange	blob \| commitdiff \| raw \| diff to current
2020-08-31	Paul Bauer	Merge branch 'release-2020' into master	blob \| commitdiff \| raw \| diff to current
2020-07-09	Pascal Merz	Divide default communicator from DD communicators	blob \| commitdiff \| raw \| diff to current
2020-07-05	Gaurav Garg	Fix cycle counters for "comm.coord" and "Wait + Comm...	blob \| commitdiff \| raw \| diff to current
2020-06-24	Berk Hess	Add class ListedForces	blob \| commitdiff \| raw \| diff to current
2020-05-12	Berk Hess	Refactor virtual site interface	blob \| commitdiff \| raw \| diff to current
2020-05-06	Paul Bauer	Merge branch 'origin/release-2020' into master	blob \| commitdiff \| raw \| diff to current
2020-04-07	Pascal Merz	Require explicit MPI_COMM for gmx_bcast and gmx_barrier	blob \| commitdiff \| raw \| diff to current
2020-03-25	Artem Zhmurov	Make use of the DeviceStreamManager	blob \| commitdiff \| raw \| diff to current
2020-03-19	Szilárd Páll	Fix DLB initial state reporting	blob \| commitdiff \| raw \| diff to current
2020-03-13	Artem Zhmurov	Make DeviceStream into a class	blob \| commitdiff \| raw \| diff to current
2020-03-11	Artem Zhmurov	Take over management of OpenCL context from PME and...	blob \| commitdiff \| raw \| diff to current
2020-03-04	Paul Bauer	Merge branch release-2020 into master	blob \| commitdiff \| raw \| diff to current
2020-02-28	Paul Bauer	Merge branch release-2019 into release-2020	blob \| commitdiff \| raw \| diff to current
2020-02-15	Berk Hess	Remove 1 pulse DD request	blob \| commitdiff \| raw \| diff to current
2020-02-15	Alan Gray	Multiple pulses for GPU Halo Exchange	blob \| commitdiff \| raw \| diff to current
2020-02-01	Artem Zhmurov	Merge "Merge branch origin/release-2020 into master"	blob \| commitdiff \| raw \| diff to current
2020-01-28	Paul Bauer	Merge branch origin/release-2020 into master	blob \| commitdiff \| raw \| diff to current
2020-01-23	Berk Hess	Fix DD rank count prime check	blob \| commitdiff \| raw \| diff to current
2020-01-09	Artem Zhmurov	Make PBC type enumeration into PbcType enum class	blob \| commitdiff \| raw \| diff to current
2020-01-08	Roland Schulz	Merge release-2019 into release-2020	blob \| commitdiff \| raw \| diff to current
2020-01-07	Paul Bauer	Merge branch origin/release-2020 into master	blob \| commitdiff \| raw \| diff to current
2020-01-07	Paul Bauer	Merge commit d30f2cb6 from release-2020 into master	blob \| commitdiff \| raw \| diff to current
2019-12-27	Paul Bauer	Merge origin/release-2019 into release-2020	blob \| commitdiff \| raw \| diff to current
2019-12-19	ejjordan	Change some domdec data members to RVec or IVec	blob \| commitdiff \| raw \| diff to current
2019-12-12	Paul Bauer	Merge branch 'origin/release-2020' into master	blob \| commitdiff \| raw \| diff to current
2019-12-12	Artem Zhmurov	Allow using GPU update with DD and update groups	blob \| commitdiff \| raw \| diff to current
2019-11-30	Paul Bauer	Merge origin/release-2020 into master	blob \| commitdiff \| raw \| diff to current
2019-11-29	Mark Abraham	Merge branch release-2019 into release-2020	blob \| commitdiff \| raw \| diff to current
2019-11-21	Mark Abraham	Merge branch release-2020	blob \| commitdiff \| raw \| diff to current
2019-11-20	Paul Bauer	Merge 'origin/release-2019' into release-2020	blob \| commitdiff \| raw \| diff to current
2019-11-14	Berk Hess	Simplify t_forcerec destruction	blob \| commitdiff \| raw \| diff to current
2019-11-07	Paul Bauer	Apply clang-format to source tree	blob \| commitdiff \| raw \| diff to current
2019-10-29	Paul Bauer	Merge branch 'release-2019' into master	blob \| commitdiff \| raw \| diff to current
2019-10-01	Berk Hess	Use gmx::Range in domdec	blob \| commitdiff \| raw \| diff to current
2019-10-01	Artem Zhmurov	StatePropagatorDataGpu object to manage GPU forces...	blob \| commitdiff \| raw \| diff to current
2019-10-01	Berk Hess	Completely remove charge groups	blob \| commitdiff \| raw \| diff to current
2019-09-30	Mark Abraham	Make a builder for DD	blob \| commitdiff \| raw \| diff to current
2019-09-25	Szilárd Páll	Merge remote-tracking branch 'origin/release-2019'	blob \| commitdiff \| raw \| diff to current
2019-09-24	Mark Abraham	Merge "Merge branch release-2019 into master"	blob \| commitdiff \| raw \| diff to current
2019-09-24	Paul Bauer	Merge branch release-2019 into master	blob \| commitdiff \| raw \| diff to current
2019-09-24	Berk Hess	Remove obsolete dd_get_ns_ranges()	blob \| commitdiff \| raw \| diff to current
2019-09-23	Mark Abraham	Fix 1D-1pulse support	blob \| commitdiff \| raw \| diff to current
2019-09-22	Berk Hess	Remove cgs_gl from gmx_domdec_comm_t	blob \| commitdiff \| raw \| diff to current
2019-09-20	Berk Hess	Fix DD 1 pulse checks without DLB	blob \| commitdiff \| raw \| diff to current
2019-09-20	Mark Abraham	Refactor to create a GpuTaskAssignments object	blob \| commitdiff \| raw \| diff to current
2019-09-19	Berk Hess	Remove bLocalCG from DD code	blob \| commitdiff \| raw \| diff to current
2019-09-19	Berk Hess	Remove obsolete make_exclusions_zone_cg()	blob \| commitdiff \| raw \| diff to current
2019-09-19	Mark Abraham	Use GPU halo exchange only when compatible DD is available	blob \| commitdiff \| raw \| diff to current
2019-09-19	Mark Abraham	Further improve getDDGridSetup	blob \| commitdiff \| raw \| diff to current
2019-09-18	Berk Hess	Fix incorrect DD ndim assertion	blob \| commitdiff \| raw \| diff to current
2019-09-17	Berk Hess	Fix todos for update groups	blob \| commitdiff \| raw \| diff to current
2019-09-16	Berk Hess	Remove obsolete mdp option ns-type	blob \| commitdiff \| raw \| diff to current
2019-09-16	Alan Gray	GPU halo exchange	blob \| commitdiff \| raw \| diff to current
2019-09-16	Berk Hess	Add option request 1D DD with 1 pulse	blob \| commitdiff \| raw \| diff to current
2019-09-10	Mark Abraham	Avoid warning in no-mpi build	blob \| commitdiff \| raw \| diff to current
2019-09-09	Berk Hess	Extract Cartesian data from DDRankSetup	blob \| commitdiff \| raw \| diff to current
2019-09-09	Berk Hess	Rename DDSetup to DDGridSetup	blob \| commitdiff \| raw \| diff to current
2019-09-09	Berk Hess	Clean up PME rank variables	blob \| commitdiff \| raw \| diff to current
2019-09-09	Berk Hess	Refactor init_domain_decomposition()	blob \| commitdiff \| raw \| diff to current
2019-09-07	Pascal Merz	Make pme_loadbal_do() independent of t_state	blob \| commitdiff \| raw \| diff to current
2019-09-06	Berk Hess	Extract getting of DDRankSetup	blob \| commitdiff \| raw \| diff to current
2019-09-06	Berk Hess	Add PP grid info to DDRankSetup	blob \| commitdiff \| raw \| diff to current
2019-09-05	Berk Hess	Extract DDRankSetup from gmx_domdec_comm_t	blob \| commitdiff \| raw \| diff to current
2019-09-05	Berk Hess	Split off getting of the DD setup	blob \| commitdiff \| raw \| diff to current
2019-09-04	Berk Hess	Collect settings for DD in DDSettings	blob \| commitdiff \| raw \| diff to current
2019-09-04	Berk Hess	Extract getting of DDSystemInfo	blob \| commitdiff \| raw \| diff to current
2019-09-04	Berk Hess	Simplify handling of DD bonded distances	blob \| commitdiff \| raw \| diff to current
2019-09-04	Berk Hess	Move constraint and bonded filtering info into DDSystemInfo	blob \| commitdiff \| raw \| diff to current
2019-09-04	Berk Hess	Move update grouping to DDSystemInfo	blob \| commitdiff \| raw \| diff to current
2019-09-04	Berk Hess	Change DD pme force buffer to std::vector	blob \| commitdiff \| raw \| diff to current
2019-09-04	Berk Hess	Initialize all members of gmx_domdec_t	blob \| commitdiff \| raw \| diff to current
2019-09-03	Berk Hess	Extract DDSystemInfo from gmx_domdec_comm_t	blob \| commitdiff \| raw \| diff to current
2019-09-03	Berk Hess	Unify manual and auto DD grid choices	blob \| commitdiff \| raw \| diff to current
2019-09-03	Berk Hess	Remove gmx_domdec_t from dd_choose_grid()	blob \| commitdiff \| raw \| diff to current
2019-09-03	Berk Hess	Extact UnitCellInfo from gmx_domdec_t	blob \| commitdiff \| raw \| diff to current
2019-08-22	Mark Abraham	Merge branch release-2019	blob \| commitdiff \| raw \| diff to current
2019-08-20	Berk Hess	Use shiftForces in ForceOuputs	blob \| commitdiff \| raw \| diff to current
2019-08-20	Mark Abraham	Fix issues for clang-analyzer-8	blob \| commitdiff \| raw \| diff to current
2019-08-16	Mark Abraham	Update testing matrices and fix warnings	blob \| commitdiff \| raw \| diff to current
2019-08-05	Berk Hess	Make box const in do_force()	blob \| commitdiff \| raw \| diff to current
2019-08-01	Mark Abraham	Merge "Merge release-2019 into master"	blob \| commitdiff \| raw \| diff to current
2019-08-01	Paul Bauer	Merge release-2019 into master	blob \| commitdiff \| raw \| diff to current
2019-06-14	Paul Bauer	Merge branch release-2018 into release-2019	blob \| commitdiff \| raw \| diff to current
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