| 2009-08-19 |
unknown | Compiles in MSVC with cmake |
tree | commitdiff |
| 2009-08-19 |
Sander Pronk | removed *s files, improved cmake/configure thread detection |
tree | commitdiff |
| 2009-08-19 |
Sander Pronk | Added full thread_mpi library, it may even compile... |
tree | commitdiff |
| 2009-08-19 |
Sander Pronk | thread_mpi now fully lock-free. cmpxch for pointers... |
tree | commitdiff |
| 2009-08-19 |
Sander Pronk | better multicast protocol in thread_mpi |
tree | commitdiff |
| 2009-08-19 |
Sander Pronk | new (faster&simpler) point-to-point protocol in thread_... |
tree | commitdiff |
| 2009-08-19 |
Sander Pronk | Now uses atomic instruction locks. |
tree | commitdiff |
| 2009-08-19 |
Sander Pronk | checkpointing works with threads |
tree | commitdiff |
| 2009-08-19 |
Sander Pronk | now starts threads at mdrunner; should still fix multisim. |
tree | commitdiff |
| 2009-08-19 |
Sander Pronk | Ewald now thread-safe (and fails in the same binary... |
tree | commitdiff |
| 2009-07-07 |
Sander Pronk | MPI send/recv more forgiving of NULL ptrs, misc. thread... |
tree | commitdiff |
| 2009-07-06 |
Sander Pronk | more const-correctness fixes |
tree | commitdiff |
| 2009-07-04 |
Sander Pronk | file names now const correct; builds in C++ |
tree | commitdiff |
| 2009-07-02 |
Sander Pronk | fixed allocation issue in libfn (futil.c). |
tree | commitdiff |
| 2009-07-01 |
Sander Pronk | enxio is thread safe (and quite possibly works) |
tree | commitdiff |
| 2009-07-01 |
Sander Pronk | now compiles with configure |
tree | commitdiff |
| 2009-07-01 |
Sander Pronk | more thread-safety issues in gmxlib |
tree | commitdiff |
| 2009-07-01 |
Sander Pronk | misc. gmxlib fixes |
tree | commitdiff |
| 2009-07-01 |
Sander Pronk | changed cmake/configure GMX_THREADS/GMX_THREAD_SHM_FDEC... |
tree | commitdiff |
| 2009-06-30 |
Sander Pronk | added output_env_t type for querying time scales, and... |
tree | commitdiff |
| 2009-06-30 |
Sander Pronk | copyrite, statutil and futil fully thread-safe |
tree | commitdiff |
| 2009-06-30 |
Sander Pronk | made a replacement for strtok: gmx_strsep. |
tree | commitdiff |
| 2009-06-27 |
Sander Pronk | small changes to filenm (a lot still needs to be fixed) |
tree | commitdiff |
| 2009-06-27 |
Sander Pronk | atoi/atof are not thread-safe: replaced all instances... |
tree | commitdiff |
| 2009-06-26 |
Sander Pronk | fixed reduce semantics |
tree | commitdiff |
| 2009-06-26 |
Sander Pronk | Fixed MPI_Reduce, added tMPI_Reduce_fast. |
tree | commitdiff |
| 2009-06-25 |
Sander Pronk | now runs (correctly) without long-range forces & load... |
tree | commitdiff |
| 2009-06-25 |
Sander Pronk | Merge branch 'thread_mpi' of git@git.gromacs.org:gromac... |
tree | commitdiff |
| 2009-06-25 |
Sander Pronk | Fixed many thread-unsafe bits of code; only gmx_wallcyc... |
tree | commitdiff |
| 2009-06-24 |
Sander Pronk | Merge branch 'thread_mpi' of git@git.gromacs.org:gromac... |
tree | commitdiff |
| 2009-06-24 |
Sander Pronk | Many thread-safety fixes in mdlib; better error reporti... |
tree | commitdiff |
| 2009-06-18 |
Sander Pronk | Merge branch 'thread_mpi' of git@git.gromacs.org:gromac... |
tree | commitdiff |
| 2009-06-18 |
Berk Hess | removed static variables and rearranged some data struc... |
tree | commitdiff |
| 2009-06-18 |
Berk Hess | made several variables const |
tree | commitdiff |
| 2009-06-17 |
Sander Pronk | Merge branch 'thread_mpi' |
tree | commitdiff |
| 2009-06-17 |
Berk Hess | removed static variables |
tree | commitdiff |
| 2009-06-17 |
Sander Pronk | intial commit of thread_mpi (compiles, but does not... |
tree | commitdiff |
| 2009-06-17 |
Berk Hess | implemented force constraining that work together with... |
tree | commitdiff |
| 2009-06-15 |
Berk Hess | Merge branch 'master' of git@git.gromacs.org:gromacs |
tree | commitdiff |
| 2009-06-15 |
Berk Hess | changed the global cginfo array to an array per molecul... |
tree | commitdiff |
| 2009-06-15 |
Teemu Murtola | More modular memory handling of selection values. |
tree | commitdiff |
| 2009-06-15 |
Berk Hess | delayed the switch to the compressed list from factor... |
tree | commitdiff |
| 2009-06-12 |
Berk Hess | implemented a low memory usage global to local atom... |
tree | commitdiff |
| 2009-06-12 |
Berk Hess | implemented a low memory usage global to local atom... |
tree | commitdiff |
| 2009-06-10 |
Berk Hess | added counters for DD load and DLB bounds communication... |
tree | commitdiff |
| 2009-06-10 |
Berk Hess | Merge branch 'master' of git@git.gromacs.org:gromacs |
tree | commitdiff |
| 2009-06-10 |
Teemu Murtola | Merge branch 'char-valued-selmethods' |
tree | commitdiff |
| 2009-06-09 |
Teemu Murtola | Added a SMETH_CHARVAL flag for selection methods. |
tree | commitdiff |
| 2009-06-08 |
Teemu Murtola | More modular handling of selection types and values. |
tree | commitdiff |
| 2009-06-05 |
Erik Lindahl | Removed CVS-specific entries from Cmake config files. |
tree | commitdiff |
| 2009-06-04 |
Erik Lindahl | Removed Id tags from master branch since they will... |
tree | commitdiff |
| 2009-06-03 |
lindahl | Restored C++ "fixes" that caused warnings for C. |
tree | commitdiff |
| 2009-06-03 |
lindahl | More C++ changes. |
tree | commitdiff |
| 2009-06-03 |
lindahl | Fixed warnings when GNU C++ 4.3 is used. |
tree | commitdiff |
| 2009-06-03 |
lindahl | Fixed extern C definitions on nonbonded kernels to... |
tree | commitdiff |
| 2009-06-03 |
teemu | Removed many const warnings from ngmx when compiling... |
tree | commitdiff |
| 2009-06-03 |
hess | moved the cos accel if statement into calc_ke_part |
tree | commitdiff |
| 2009-06-03 |
teemu | Fixed many warnings about const issues in C++. |
tree | commitdiff |
| 2009-06-03 |
hess | updated for C++ compilation |
tree | commitdiff |
| 2009-06-03 |
lindahl | More fixes for warnings after enabling Gromacs compilat... |
tree | commitdiff |
| 2009-06-03 |
hess | updated for C++ compilation |
tree | commitdiff |
| 2009-06-03 |
hess | added comment about vsite velocities |
tree | commitdiff |
| 2009-06-03 |
hess | updated for C++ compilation |
tree | commitdiff |
| 2009-06-03 |
lindahl | Stupid cvs doesnt detect commit conflicts correctly... |
tree | commitdiff |
| 2009-06-03 |
lindahl | Fixed another bunch of C++ compile errors. |
tree | commitdiff |
| 2009-06-03 |
hess | updated for C++ compilation |
tree | commitdiff |
| 2009-06-03 |
spoel | Changed char to const char |
tree | commitdiff |
| 2009-06-03 |
hess | added mssing pr_bvec |
tree | commitdiff |
| 2009-06-03 |
spoel | Changed char to const char where appropriated |
tree | commitdiff |
| 2009-06-03 |
teemu | Improved compilation (no errors, less warnings) of... |
tree | commitdiff |
| 2009-06-03 |
hess | added snew template by Teemu for compling with C++ |
tree | commitdiff |
| 2009-06-03 |
hess | Fixed missing closing brace with C++ |
tree | commitdiff |
| 2009-06-01 |
hess | implemented the PP PME communication for 2D PME |
tree | commitdiff |
| 2009-05-29 |
teemu | Reorganized selection parsing code. |
tree | commitdiff |
| 2009-05-26 |
hess | fixed pbc issues with cylinder pulling when the pull... |
tree | commitdiff |
| 2009-05-19 |
hess | some minor fixes for unbound systems with DD |
tree | commitdiff |
| 2009-05-18 |
hess | implemented vacuum simulations with DD |
tree | commitdiff |
| 2009-05-18 |
hess | implemented vacuum simulations with DD |
tree | commitdiff |
| 2009-05-18 |
hess | added inputrec2nboundeddim |
tree | commitdiff |
| 2009-05-13 |
hess | fixed mix up of an int and real in SA stuff, which... |
tree | commitdiff |
| 2009-05-12 |
per | Removed counting interactions twice when calculating... |
tree | commitdiff |
| 2009-05-11 |
lindahl | Cross-tree fix for all source files with incorrect... |
tree | commitdiff |
| 2009-05-10 |
lindahl | fix for Sparc/linux 32bit userland cycle counters. |
tree | commitdiff |
| 2009-05-08 |
lindahl | New routines for basic thread operations and atomic... |
tree | commitdiff |
| 2009-05-08 |
lindahl | Basic thread primitives. |
tree | commitdiff |
| 2009-05-05 |
hess | removed incorrect ekinh data in checkpoint file when... |
tree | commitdiff |
| 2009-05-04 |
hess | fixed incorrect kinetic energies with -rerun and made... |
tree | commitdiff |
| 2009-04-29 |
per | Added a cycle counter for Born radii calculation |
tree | commitdiff |
| 2009-04-28 |
hess | implemented grid neighbor searching without pbc, does... |
tree | commitdiff |
| 2009-04-27 |
per | Fixed a bug that made d_cmap==d_orientational_restraints |
tree | commitdiff |
| 2009-04-21 |
lindahl | Initial CMAP support commit. |
tree | commitdiff |
| 2009-04-21 |
lindahl | Parallel domain decomposition support for Generalized... |
tree | commitdiff |
| 2009-04-20 |
lindahl | First version of new SSE intrinsics kernels, works... |
tree | commitdiff |
| 2009-04-10 |
spoel | Added support for writing CONECT records to pdb files... |
tree | commitdiff |
| 2009-04-09 |
kasson | PK one more file from Per diffs |
tree | commitdiff |
| 2009-04-09 |
hess | replaced the global buf vector by local vectors |
tree | commitdiff |
| 2009-04-08 |
hess | replaced the word zone by cell for domain decomposition... |
tree | commitdiff |
| 2009-04-08 |
hess | removed buf as an argument for do_constrain_first ... |
tree | commitdiff |
| 2009-04-03 |
spoel | Clarified header |
tree | commitdiff |
| 2009-04-02 |
kasson | PK committing patches from Per Larsson for nb kernels. |
tree | commitdiff |
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