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Fix DLB initial state reporting
[alexxy/gromacs.git]
/
docs
/
2020-03-19
Szilárd Páll
Fix DLB initial state reporting
tree
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commitdiff
2020-03-17
Berk Hess
Disable Ewald dipole correction without DD
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commitdiff
2020-03-03
Paul Bauer
Prepare for 2020.2
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commitdiff
2020-03-03
Paul Bauer
Version 2020.1
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commitdiff
2020-03-03
Paul Bauer
Always hash files when building from release tarball
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commitdiff
2020-03-02
Berk Hess
Fix center of mass motion removal with frozen atoms
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commitdiff
2020-03-02
Berk Hess
Fix nrdf with partial COMM removal
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commitdiff
2020-03-02
Berk Hess
Fix too small pairlist buffer on Intel GPUs
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commitdiff
2020-03-02
Paul Bauer
Revert "Remove frozen atoms from VCM groups"
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commitdiff
2020-03-02
Paul Bauer
Remove frozen atoms from VCM groups
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commitdiff
2020-02-28
Paul Bauer
Merge branch release-2019 into release-2020
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commitdiff
2020-02-28
Paul Bauer
Version 2019.6
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commitdiff
2020-02-27
Pascal Merz
Use legacy code path for t_graph (modular simulator)
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commitdiff
2020-02-26
Szilárd Páll
Avoid mdrun terminate due to GPU sanity check errors
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commitdiff
2020-02-26
Szilárd Páll
Document NVIDIA OpenCL broken on Volta and Turing
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commitdiff
2020-02-26
Szilárd Páll
Remove outdated PME-GPU limitation in user guide
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commitdiff
2020-02-26
Pascal Merz
Fix calculation of reciprocal terms in rerun
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commitdiff
2020-02-25
Magnus Lundborg
Fix out of sync checkpoint files in simulations sharing...
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commitdiff
2020-02-25
Paul Bauer
Avoid integer overflow in dispersion correction
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commitdiff
2020-02-25
Christian Blau
Document density-fit cross-correlation in .mdp options
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commitdiff
2020-02-22
David van der Spoel
Fixed bug in gmx disre due to inconsistency in input.
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commitdiff
2020-02-21
Pascal Merz
Use legacy code path for NMR restraints (modular simulator)
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commitdiff
2020-02-21
Pascal Merz
Correct for skewed box in non-DD modular simulator
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commitdiff
2020-02-21
Berk Hess
Add fatal error when multisim runs sharing state have...
tree
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commitdiff
2020-02-20
David van der Spoel
Fixed bug in orires code that was checking too strict.
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commitdiff
2020-02-20
David van der Spoel
Fixed bug in orires code that was checking too strict.
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commitdiff
2020-02-14
Pascal Merz
Fix reading of checkpoints with Parrinello-Rahman ...
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commitdiff
2020-02-13
Pascal Merz
Fix checkNumberOfBondedInteractions bug
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commitdiff
2020-02-05
Berk Hess
Actually fix PME forces with FE without perturbed q/LJ
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commitdiff
2020-02-04
Berk Hess
Actually fix PME forces with FE without perturbed q/LJ
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commitdiff
2020-01-24
Szilárd Páll
Fix deadlock in PP-PME balancing startup delay
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commitdiff
2020-01-23
Berk Hess
Fix DD rank count prime check
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commitdiff
2020-01-17
Paul Bauer
Actually fix Gitlab doc build
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commitdiff
2020-01-17
Paul Bauer
Fix bad link in developer docs
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commitdiff
2020-01-17
Berk Hess
Add check for shells and GPU update
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commitdiff
2020-01-16
Berk Hess
Correct fixed redmine issue id from 3297 to 3296
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commitdiff
2020-01-15
Berk Hess
Fix multisim with parallel simulation
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commitdiff
2020-01-10
Szilárd Páll
Improve mdrun performance user guide
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commitdiff
2020-01-08
Roland Schulz
Merge release-2019 into release-2020
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commitdiff
2020-01-07
Roland Schulz
Workaround for ICC 19u5 and 20initial
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commitdiff
2020-01-07
Roland Schulz
Add support for ICC NextGen with MKL
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commitdiff
2020-01-03
M. Eric Irrgang
Remove transitional links for online gmxapi Python...
tree
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commitdiff
2020-01-01
Paul Bauer
Prepare for 2020.1
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commitdiff
2020-01-01
Paul Bauer
GROMACS 2020 release
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commitdiff
2020-01-01
Paul Bauer
Revert "GROMACS 2020 release"
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commitdiff
2020-01-01
Paul Bauer
GROMACS 2020 release
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commitdiff
2019-12-31
Artem Zhmurov
Add description of GMX_FORCE_UPDATE_DEFAULT_GPU dev...
tree
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commitdiff
2019-12-28
Artem Zhmurov
Change the behavior of the GPU update UI
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commitdiff
2019-12-28
M. Eric Irrgang
Resolve CMake ambiguities for gmxapi Python package...
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commitdiff
2019-12-28
Paul Bauer
Change releng to give information about Gitlab
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commitdiff
2019-12-28
Paul Bauer
Extend information for GPU update
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commitdiff
2019-12-28
Mark Abraham
Merge "Merge origin/release-2019 into release-2020...
tree
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commitdiff
2019-12-28
Paul Bauer
Remove membed from features
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commitdiff
2019-12-28
Paul Bauer
Deprecate support for Armv7
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commitdiff
2019-12-27
Paul Bauer
Merge origin/release-2019 into release-2020
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commitdiff
2019-12-27
M. Eric Irrgang
Update intersphinx configuration.
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commitdiff
2019-12-26
M. Eric Irrgang
Set Sphinx default role.
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commitdiff
2019-12-26
M. Eric Irrgang
Fix external web link.
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commitdiff
2019-12-26
M. Eric Irrgang
Clean up Sphinx interpreted text in the default role.
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commitdiff
2019-12-23
Paul Bauer
Prepare for GROMACS 2019.6
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commitdiff
2019-12-23
Paul Bauer
GROMACS version 2019.5
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commitdiff
2019-12-20
Alan Gray
Add user guide doc for GPU buffer ops and comms env...
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commitdiff
2019-12-20
Paul Bauer
Fix wrong header in release notes
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commitdiff
2019-12-20
Christian Blau
Remove problematic output of gmx angle
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commitdiff
2019-12-20
Szilárd Páll
Enable buffer ops when GMX_GPU_DD_COMMS is set
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commitdiff
2019-12-19
Alan Gray
Release note for GPU direct communications
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commitdiff
2019-12-19
Szilárd Páll
PP-PME load balancing improvements
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commitdiff
2019-12-19
M. Eric Irrgang
Add issue tracking for deprecations.
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commitdiff
2019-12-18
M. Eric Irrgang
Update reference to uncrustify and clang-format.
tree
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commitdiff
2019-12-18
Berk Hess
Change grompp decoupling SD warning to note
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commitdiff
2019-12-17
Paul Bauer
Set correct dependency for doc build on gmxapi
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commitdiff
2019-12-17
Szilárd Páll
Add wallcycle counting to StatePropagatorDataGpu
tree
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commitdiff
2019-12-17
M. Eric Irrgang
Be more specific with clang-format suggestions.
tree
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commitdiff
2019-12-16
Szilárd Páll
Fix the GPU bonded stream with 1 PP + 1 PME rank
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commitdiff
2019-12-16
Paul Bauer
Fix torsion angle calculation
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commitdiff
2019-12-13
Paul Bauer
Check for using correct hwloc headers and runtime
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commitdiff
2019-12-12
Christian Blau
Densityfitting - enforce similarity increase with adapt...
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commitdiff
2019-12-11
Artem Zhmurov
Clarify what setting zero to some output mdp options...
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commitdiff
2019-12-11
M. Eric Irrgang
gmxapi landing page update.
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commitdiff
2019-12-11
M. Eric Irrgang
gmxapi documentation readability improvements.
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commitdiff
2019-12-11
M. Eric Irrgang
gmxapi documentation formatting improvements.
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commitdiff
2019-12-06
M. Eric Irrgang
Add notes on MPI with gmxapi Python package.
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commitdiff
2019-12-06
Christian Blau
Change arbitrary units to counts in RMSD distance distr...
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commitdiff
2019-12-06
M. Eric Irrgang
gmxapi Python package usage prose.
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commitdiff
2019-12-01
Paul Bauer
Use DOI for citing in reference manual section
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commitdiff
2019-11-29
Berk Hess
Merge "Merge branch release-2019 into release-2020...
tree
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commitdiff
2019-11-29
Mark Abraham
Merge branch release-2019 into release-2020
tree
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commitdiff
2019-11-28
Berk Hess
Update documenation for NPT GPU update
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commitdiff
2019-11-28
Berk Hess
Remove assertion failure in AWH without initial stage
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commitdiff
2019-11-26
Berk Hess
Fix issues with AWH with periodic pulling
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commitdiff
2019-11-25
Christian Blau
Fix duplicate CONNECT records in pdb files
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commitdiff
2019-11-25
Christian Blau
Read mrc density map format with all endianesses.
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commitdiff
2019-11-20
Vedran Miletić
Fix building on Solaris with GCC
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commitdiff
2019-11-20
Paul Bauer
Merge 'origin/release-2019' into release-2020
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commitdiff
2019-11-20
M. Eric Irrgang
Remove stub content from gmxapi docs.
tree
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commitdiff
2019-11-19
Mark Abraham
Updated release notes for CODATA update
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commitdiff
2019-11-18
Berk Hess
Fix intermolecular interactions with DD
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commitdiff
2019-11-17
M. Eric Irrgang
Remove extraneous file.
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commitdiff
2019-11-17
M. Eric Irrgang
Add transitional links for online gmxapi Python package...
tree
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commitdiff
2019-11-12
Paul Bauer
Indicate which versions are no longer supported
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