Tidy up the FE kernel
[alexxy/gromacs.git] / docs /
2019-09-10 Paul BauerAdd method to extract clusters from trajectory
2019-09-10 Pascal MerzCompositeSimulatorElement for the modular simulator
2019-09-10 Pascal MerzCoordinate Propagators
2019-09-10 Pascal MerzConstraint element for the modular simulator
2019-09-09 Pascal MerzDomain decomposition and PME load balancing for modular...
2019-09-09 Paul BauerAdd gmx convert-trj
2019-09-07 Pascal MerzForceElement and ShellFCElement for the modular simulator
2019-09-06 Pascal MerzComputeGlobalsElement for the modular simulator
2019-09-05 Pascal MerzIntroduce topology class for modular simulator
2019-09-05 Pascal MerzRename MicroState to StatePropagatorData for modular...
2019-09-03 Pascal MerzIntroduce energy element for modular simulator
2019-08-28 Pascal MerzIntroduce MicroState for modular simulator
2019-08-28 Pascal MerzIntroduce signallers for modular integrator
2019-08-28 Mark AbrahamFix integration issues
2019-08-28 Pascal MerzIntroduce the main modular simulator interfaces and...
2019-08-28 Mark AbrahamImproved usability of grompp by rejecting more invalid...
2019-08-26 Paul BauerRemove section checking api level
2019-08-26 Christian BlauActivation of density fitting and move of module notifi...
2019-08-23 Paul BauerRemoves checker for installed files
2019-08-23 Mark AbrahamUpdate clang-tidy to clang version 8
2019-08-22 Mark AbrahamMerge branch release-2019
2019-08-20 Mark AbrahamUse potential-shift as default modifier
2019-08-20 Mark AbrahamFix issues for clang-analyzer-8
2019-08-20 Berk HessFix missing bonded forces with CUDA GPUs and DD
2019-08-16 Mark AbrahamStop nbnxm/grid.h depending on SIMD module
2019-08-15 Szilárd PállFix OpenCL gather reduction
2019-08-14 Christian BlauInternal parameter storage for IMDModules
2019-08-09 Berk HessSIMD acceleration for F_FOURDIHS and F_PIDIHS
2019-08-08 Mark AbrahamStop testing ICC on Windows
2019-08-08 Christian BlauProvide callbacks/notifications for MDModules
2019-08-06 Berk HessFix latex formula in reference manual
2019-08-02 Berk HessMade gmx disre work with non-consecutively labeled...
2019-08-02 yongwangCPHSolve issue with demux.pl
2019-08-01 Mark AbrahamMerge "Merge release-2019 into master"
2019-08-01 Paul BauerMerge release-2019 into master
2019-07-31 Berk HessAdd grompp warning with use of GROMOS FF
2019-07-29 Berk HessFix segmentation fault with cosine pulling
2019-07-28 Berk HessRemoved generalized reaction-field
2019-07-26 Christian BlauFix failing check-source target on python3.6
2019-07-23 Mark AbrahamUpdate developer guide
2019-07-09 David van der SpoelFixed small bug in gmx anaeig
2019-07-09 Paul BauerFix link to acpype repository
2019-07-08 Mark AbrahamFix hwloc and sphinx detection
2019-07-02 Mark AbrahamClarify wording of release notes
2019-07-02 M. Eric IrrgangPython detection consolidation.
2019-07-02 Paul BauerFix bug in gmx xpm2ps
2019-06-28 Magnus LundborgFused GPU bonded kernels
2019-06-24 Szilárd PállOnly use AVX512 in own-FFTW if GROMACS also uses it
2019-06-19 Szilárd PállDisable PME GPU on Apple OpenCL
2019-06-18 Paul BauerExtend ISerializer functionality
2019-06-14 Paul BauerPrepare for 2019.4
2019-06-14 Paul BauerVersion 2019.3
2019-06-14 Paul BauerMerge branch release-2018 into release-2019
2019-06-12 Paul BauerFix qsort not being defined on Apple Clang
2019-06-11 Paul BauerFix residue and molecule indexing in selections
2019-06-11 Paul BauerExtend information for gmxcpp syntax error.
2019-06-11 Berk HessAllow AWH geometry 'direction' to be periodic
2019-06-11 Paul BauerAdd check for too many grid points in hbond
2019-06-10 Berk HessFix gmx wham with angle geometries
2019-06-05 Berk HessFix reference SIMD memory alignment
2019-05-29 Berk HessFix missing intermolecular interactions with DD
2019-05-29 Paul BauerVersion 2018.7
2019-05-27 Berk HessWork around gcc 7 avx512 bug
2019-05-27 Paul BauerAdd more info for wrong line endings
2019-05-24 Paul BauerFix PQR formatting
2019-05-24 Paul BauerFix membrane embedding
2019-05-23 Szilárd PállFix mulitple link refs in dev-manual
2019-05-23 Mark AbrahamRevert "Fixed dvdlambda for SHAKE + FE"
2019-05-23 Paul BauerAdd check for allocating too many interactions
2019-05-22 Mark AbrahamRewrite starting behavior
2019-05-22 Mark AbrahamIntroduce tri-state enums for restarts
2019-05-22 Jinke FanAdd support for Hygon Dhyana processor
2019-05-20 Mark AbrahamFix equation typo
2019-05-16 Pascal MerzUse Python 3
2019-05-14 Berk HessCorrect user guide postion restraint virial
2019-05-13 Paul BauerPrepare for 2018.7
2019-05-13 Paul BauerFix math formatting in reference manual
2019-05-08 Mark AbrahamProvide hook for forks of GROMACS to describe themselves
2019-05-07 Mark AbrahamAdd an example of using an MPI wrapper compiler
2019-05-03 Berk HessRemoved non-existent AWH mdp option
2019-05-02 Mark AbrahamEnhance path search functions
2019-05-02 Paul BauerFix FPE in do_steep
2019-04-25 Paul BauerAdd Interface to change coordinate file info
2019-04-25 Mark AbrahamUpdate style guide about class enums
2019-04-18 Mark AbrahamCreate gmx::compat::optional
2019-04-17 Berk HessRemove group scheme search code
2019-04-17 Paul BauerCreate gmx::compat::string_view
2019-04-16 Paul BauerPrepare for version 2019.3
2019-04-16 Mark AbrahamRemoved mdrun -gcom
2019-04-16 Paul BauerVersion 2019.2
2019-04-16 Paul BauerFix off-by-one error in gmx cluster
2019-04-16 Berk HessMake mdrun -nsteps work again.
2019-04-15 Berk HessUpdate 2019 release notes for issue 2845
2019-04-15 Szilárd PállAdd user guide note on AVX512 throttle in GPU runs
2019-04-15 Berk HessFix pdb-related issues
2019-04-15 Berk HessDisallow pull geometry direction-periodic with AWH
2019-04-09 Mark AbrahamFix typo in AVX512 detection code
2019-04-08 M. Eric IrrgangRemove stale "TODO".
2019-04-05 David van der SpoelFixed manual for dihedral restraints.
2019-04-05 Морозов ДмитрийFixes bug in l-bfgs.
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